Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-409
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 282-409
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 288-411
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 288-411
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 289-403
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 289-409
Cow position:
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 291-397
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 373-688
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 206, 12

Conread position: 379-731
Cow position:
Alignm length: 354
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 381-726
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 15, 63

Conread position: 391-725
Cow position:
Alignm length: 335
Alignm identity: 220
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 393-650
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 70

Conread position: 394-728
Cow position:
Alignm length: 340
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 258

Conread position: 396-546
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 396-604
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 38

Conread position: 396-631
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-631
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 396-642
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-719
Cow position:
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 56

Conread position: 396-721
Cow position:
Alignm length: 326
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-723
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 146

Conread position: 396-725
Cow position:
Alignm length: 333
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 24

Conread position: 396-725
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 217, 147

Conread position: 396-725
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 32, 236

Conread position: 396-727
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 256, 127

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 143

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 68

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 97

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 397-707
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 397-725
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 65

Conread position: 398-546
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 398-614
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 143, 0

Conread position: 398-621
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 398-717
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 398-722
Cow position:
Alignm length: 326
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 143

Conread position: 398-725
Cow position:
Alignm length: 328
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-730
Cow position:
Alignm length: 335
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 108

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 250

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 152

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 402-607
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 404-623
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 38

Conread position: 404-663
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 31

Conread position: 404-725
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 71

Conread position: 405-731
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 407-725
Cow position:
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 410-530
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 410-722
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 73

Conread position: 410-728
Cow position:
Alignm length: 326
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 158, 78

Conread position: 410-731
Cow position:
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 411-731
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 9

Conread position: 413-731
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 35

Conread position: 417-727
Cow position:
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 50

Conread position: 417-731
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 124, 31

Conread position: 420-728
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 201, 73

Conread position: 425-731
Cow position:
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 425-731
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 91, 228

Conread position: 426-724
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 123, 0

Conread position: 434-731
Cow position:
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 90

Conread position: 444-694
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 67

Conread position: 464-692
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 59

Conread position: 470-717
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 470-731
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 470-731
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 79

Conread position: 471-731
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 485-719
Cow position:
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 489-725
Cow position:
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 502-719
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 131, 40

Conread position: 506-731
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 508-706
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 514-731
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 524-725
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 524-731
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 525-731
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 526-685
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 129

Conread position: 526-725
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 23

Conread position: 531-731
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 116, 0

Conread position: 532-731
Cow position:
Alignm length: 200
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 534-723
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 111, 83

Conread position: 537-727
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 91

Conread position: 542-731
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 542-731
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 111, 0

Conread position: 610-723
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 620-731
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 630-731
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.