Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056B14.3 |
| Conread position: | 273-397 |
| Cow position: | chr21:15548190-15548315 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 278-396 |
| Cow position: | chr21:6966789-6966907 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-411 |
| Cow position: | chr21:10519496-10519364 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 278-411 |
| Cow position: | chr21:15398298-15398430 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 278-411 |
| Cow position: | chr21:32397373-32397505 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 278-411 |
| Cow position: | chr21:36375665-36375534 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 278-411 |
| Cow position: | chr21:37373904-37373772 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 278-411 |
| Cow position: | chr21:39427754-39427622 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 278-412 |
| Cow position: | chr21:11291366-11291233 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 278-412 |
| Cow position: | chr21:27620820-27620953 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 280-412 |
| Cow position: | chr21:28879041-28879170 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 282-397 |
| Cow position: | chr21:2538476-2538591 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-396 |
| Cow position: | chr21:13112726-13112833 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-396 |
| Cow position: | chr21:27068294-27068401 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-397 |
| Cow position: | chr21:17143343-17143235 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-397 |
| Cow position: | chr21:33256221-33256113 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-397 |
| Cow position: | chr21:44763295-44763403 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-398 |
| Cow position: | chr21:42916460-42916351 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-402 |
| Cow position: | chr21:26699998-26700111 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-403 |
| Cow position: | chr21:2879161-2879274 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 289-411 |
| Cow position: | chr21:2513518-2513397 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 289-411 |
| Cow position: | chr21:7063003-7063124 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 289-411 |
| Cow position: | chr21:28614982-28614862 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 289-411 |
| Cow position: | chr21:33317837-33317958 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 289-411 |
| Cow position: | chr21:34656627-34656506 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 289-411 |
| Cow position: | chr21:34902715-34902836 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 289-412 |
| Cow position: | chr21:4078714-4078592 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 291-411 |
| Cow position: | chr21:24948771-24948651 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 291-412 |
| Cow position: | chr21:7154998-7154879 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 293-397 |
| Cow position: | chr21:5594391-5594288 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 297-397 |
| Cow position: | chr21:37123697-37123797 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-411 |
| Cow position: | chr21:27148897-27149010 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 363-731 |
| Cow position: | chr21:11157148-11156781 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 367-684 |
| Cow position: | chr21:38917228-38917541 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 374-721 |
| Cow position: | chr21:35774608-35774944 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 388-731 |
| Cow position: | chr21:18816557-18816219 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 392-669 |
| Cow position: | chr21:6626232-6626504 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 17, 154 |
| Conread position: | 395-728 |
| Cow position: | chr21:25815854-25815534 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 396-546 |
| Cow position: | chr21:27567453-27567601 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 396-586 |
| Cow position: | chr21:218715-218903 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 396-607 |
| Cow position: | chr21:2712618-2712813 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 396-607 |
| Cow position: | chr21:38802144-38802354 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-625 |
| Cow position: | chr21:26649005-26648779 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-651 |
| Cow position: | chr21:27150187-27150445 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 143 |
| Conread position: | 396-694 |
| Cow position: | chr21:38023837-38024126 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 396-700 |
| Cow position: | chr21:4182260-4182564 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 145 |
| Conread position: | 396-707 |
| Cow position: | chr21:24085096-24084787 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 57, 144 |
| Conread position: | 396-712 |
| Cow position: | chr21:26849320-26849009 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 88 |
| Conread position: | 396-713 |
| Cow position: | chr21:13298300-13298608 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 396-717 |
| Cow position: | chr21:4588307-4587988 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 76 |
| Conread position: | 396-719 |
| Cow position: | chr21:361381-361696 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 82 |
| Conread position: | 396-719 |
| Cow position: | chr21:2512556-2512877 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-719 |
| Cow position: | chr21:21701616-21701940 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 396-719 |
| Cow position: | chr21:34655535-34655857 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 252 |
| Conread position: | 396-722 |
| Cow position: | chr21:405451-405132 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 183, 107 |
| Conread position: | 396-722 |
| Cow position: | chr21:23297046-23296743 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 396-725 |
| Cow position: | chr21:34594336-34594011 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 218, 127 |
| Conread position: | 396-727 |
| Cow position: | chr21:13185321-13185649 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 315, 36 |
| Conread position: | 396-730 |
| Cow position: | chr21:997140-996803 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 396-730 |
| Cow position: | chr21:6414317-6413985 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-731 |
| Cow position: | chr21:1286508-1286162 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 264 |
| Conread position: | 396-731 |
| Cow position: | chr21:3170109-3170435 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 396-731 |
| Cow position: | chr21:7591365-7591695 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 142 |
| Conread position: | 396-731 |
| Cow position: | chr21:11507321-11507642 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 396-731 |
| Cow position: | chr21:19612467-19612799 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 396-731 |
| Cow position: | chr21:20742932-20742608 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 202, 34 |
| Conread position: | 396-731 |
| Cow position: | chr21:26635450-26635118 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-731 |
| Cow position: | chr21:26836897-26837229 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 140 |
| Conread position: | 396-731 |
| Cow position: | chr21:33710856-33711173 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-731 |
| Cow position: | chr21:37372933-37373266 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 396-731 |
| Cow position: | chr21:39426779-39427105 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 46 |
| Conread position: | 396-731 |
| Cow position: | chr21:44764248-44763914 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 111 |
| Conread position: | 396-731 |
| Cow position: | chr21:47942656-47942987 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 60 |
| Conread position: | 397-726 |
| Cow position: | chr21:38805691-38805367 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 143 |
| Conread position: | 397-730 |
| Cow position: | chr21:25125318-25125639 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 397-731 |
| Cow position: | chr21:28257130-28257459 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 397-731 |
| Cow position: | chr21:28614036-28614352 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 398-607 |
| Cow position: | chr21:10851786-10851994 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 398-617 |
| Cow position: | chr21:33253890-33254108 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 398-718 |
| Cow position: | chr21:29003824-29003493 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 261 |
| Conread position: | 398-725 |
| Cow position: | chr21:30597761-30597436 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 110 |
| Conread position: | 398-726 |
| Cow position: | chr21:26566557-26566231 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 398-730 |
| Cow position: | chr21:30748-31066 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 126 |
| Conread position: | 398-731 |
| Cow position: | chr21:147630-147960 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:2880116-2879789 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:3780482-3780815 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:4565170-4565500 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 398-731 |
| Cow position: | chr21:5018849-5019182 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 248 |
| Conread position: | 398-731 |
| Cow position: | chr21:10568408-10568737 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:17224988-17224652 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 166, 107 |
| Conread position: | 398-731 |
| Cow position: | chr21:27069255-27068924 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:30563379-30563703 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:31514607-31514277 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:36979191-36978863 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:40269963-40269631 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 398-731 |
| Cow position: | chr21:47647040-47647372 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 144 |
| Conread position: | 401-698 |
| Cow position: | chr21:23804138-23803846 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 404-690 |
| Cow position: | chr21:18340746-18340463 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 404-713 |
| Cow position: | chr21:31639628-31639934 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 404-722 |
| Cow position: | chr21:23651879-23652193 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 138, 101 |
| Conread position: | 404-731 |
| Cow position: | chr21:468615-468937 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 404-731 |
| Cow position: | chr21:9893684-9894007 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 108 |
| Conread position: | 405-723 |
| Cow position: | chr21:29633491-29633795 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 406-731 |
| Cow position: | chr21:22751726-22751406 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 166, 68 |
| Conread position: | 410-717 |
| Cow position: | chr21:34035271-34034973 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 410-723 |
| Cow position: | chr21:1194168-1194468 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 410-725 |
| Cow position: | chr21:21025178-21025494 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 410-729 |
| Cow position: | chr21:2539357-2539042 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 410-731 |
| Cow position: | chr21:1688448-1688133 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 410-731 |
| Cow position: | chr21:4907461-4907144 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 262, 72 |
| Conread position: | 410-731 |
| Cow position: | chr21:27285182-27285487 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 410-731 |
| Cow position: | chr21:42915528-42915844 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 411-731 |
| Cow position: | chr21:34000362-34000036 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 412-727 |
| Cow position: | chr21:45491765-45492078 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 62 |
| Conread position: | 412-731 |
| Cow position: | chr21:35143968-35143655 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 413-731 |
| Cow position: | chr21:31250717-31251033 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 414-677 |
| Cow position: | chr21:28999443-28999705 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 415-724 |
| Cow position: | chr21:9865335-9865039 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 159, 33 |
| Conread position: | 415-730 |
| Cow position: | chr21:21139438-21139747 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 10 |
| Conread position: | 420-725 |
| Cow position: | chr21:4712433-4712716 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 8, 96 |
| Conread position: | 421-731 |
| Cow position: | chr21:2417938-2418243 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 425-719 |
| Cow position: | chr21:21916970-21917251 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 106, 7 |
| Conread position: | 425-731 |
| Cow position: | chr21:20770660-20770954 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 225, 31 |
| Conread position: | 428-713 |
| Cow position: | chr21:9340352-9340629 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 428-727 |
| Cow position: | chr21:13194786-13195077 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 428-727 |
| Cow position: | chr21:40081133-40081409 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 434-731 |
| Cow position: | chr21:26402012-26401713 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 92 |
| Conread position: | 435-730 |
| Cow position: | chr21:37149725-37150012 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 436-698 |
| Cow position: | chr21:4737437-4737692 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 438-730 |
| Cow position: | chr21:7154084-7154374 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 451-600 |
| Cow position: | chr21:37124579-37124430 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 460-708 |
| Cow position: | chr21:29910798-29910555 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 478-731 |
| Cow position: | chr21:41885758-41885504 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 71 |
| Conread position: | 478-731 |
| Cow position: | chr21:45783224-45783473 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 482-723 |
| Cow position: | chr21:2723069-2723306 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 485-723 |
| Cow position: | chr21:3115405-3115636 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 485-731 |
| Cow position: | chr21:11469543-11469785 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 165, 57 |
| Conread position: | 506-731 |
| Cow position: | chr21:4096495-4096718 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 511-731 |
| Cow position: | chr21:2672451-2672238 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 514-730 |
| Cow position: | chr21:32832400-32832183 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 141, 36 |
| Conread position: | 523-708 |
| Cow position: | chr21:39092203-39092387 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 542-720 |
| Cow position: | chr21:27567627-27567804 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 544-731 |
| Cow position: | chr21:4866004-4865821 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 545-687 |
| Cow position: | chr21:46289961-46290103 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 545-731 |
| Cow position: | chr21:5011880-5011696 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 546-731 |
| Cow position: | chr21:36980509-36980684 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 556-725 |
| Cow position: | chr21:12537255-12537420 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 581-731 |
| Cow position: | chr21:3804819-3804962 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 582-731 |
| Cow position: | chr21:4036141-4036289 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 590-731 |
| Cow position: | chr21:43564208-43564068 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 596-731 |
| Cow position: | chr21:6967557-6967423 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 600-731 |
| Cow position: | chr21:10852134-10852263 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 610-725 |
| Cow position: | chr21:41797612-41797726 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 616-731 |
| Cow position: | chr21:33318470-33318356 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 619-731 |
| Cow position: | chr21:40683339-40683450 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.