Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056B14.3
        

               Conread position:
               273-411
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               273-411
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               277-392
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-402
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               278-411
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               278-411
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               278-411
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               278-411
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-403
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-403
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-411
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               289-411
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               291-412
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               384-603
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               385-731
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               120, 5
               

               Conread position:
               392-695
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               394-719
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               156, 48
               

               Conread position:
               394-731
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               395-641
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               105, 149
               

               Conread position:
               395-731
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               396-509
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-545
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 111
               

               Conread position:
               396-546
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               396-553
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               107, 115
               

               Conread position:
               396-556
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               5, 61
               

               Conread position:
               396-659
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               396-687
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               147, 97
               

               Conread position:
               396-718
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               396-719
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               396-719
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               159, 115
               

               Conread position:
               396-725
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               396-726
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 186
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 154
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 8
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               106, 120
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 259
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 154
               

               Conread position:
               397-723
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 102
               

               Conread position:
               397-730
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 255
               

               Conread position:
               398-719
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-719
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 109
               

               Conread position:
               398-723
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               398-725
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               398-725
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-730
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 141
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 143
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 251
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               400-725
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               143, 210
               

               Conread position:
               401-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 133
               

               Conread position:
               404-725
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               404-725
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 119
               

               Conread position:
               404-731
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 136
               

               Conread position:
               404-731
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               404-731
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               410-731
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               413-731
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               414-717
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               420-725
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               276, 22
               

               Conread position:
               426-731
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               120, 163
               

               Conread position:
               434-731
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               448-731
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               465-731
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               477-731
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               485-719
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               493-717
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               512-728
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               532-722
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               115, 18
               

               Conread position:
               542-708
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               543-719
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               552-731
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               554-708
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               554-724
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               557-731
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               153, 90
               

               Conread position:
               602-731
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               611-719
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               619-731
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               620-731
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               627-731
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.