Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 248-411
Cow position: chr24:36037596-36037757 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 11

Conread position: 272-410
Cow position: chr24:16647309-16647446 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 273-411
Cow position: chr24:13234834-13234697 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 275-411
Cow position: chr24:29154953-29154817 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 130

Conread position: 278-411
Cow position: chr24:6440342-6440210 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr24:6963438-6963306 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr24:20366955-20366823 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr24:25371524-25371392 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr24:32362531-32362664 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 128

Conread position: 278-411
Cow position: chr24:40551213-40551081 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 289-396
Cow position: chr24:19835986-19835879 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-396
Cow position: chr24:19884872-19884765 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:6412058-6411950 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:11691421-11691529 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:12333143-12333251 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:16081909-16082017 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:16559726-16559834 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:29189865-29189757 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr24:31380998-31380888 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 289-403
Cow position: chr24:146019-146133 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-409
Cow position: chr24:18267909-18268027 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 289-411
Cow position: chr24:19689002-19689123 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position: chr24:21248369-21248490 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 289-412
Cow position: chr24:12203787-12203909 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 290-396
Cow position: chr24:17323270-17323164 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 291-411
Cow position: chr24:14377080-14377199 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 291-411
Cow position: chr24:39680100-39679981 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 369-724
Cow position: chr24:14870738-14870381 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 5

Conread position: 374-731
Cow position: chr24:30447612-30447956 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 11

Conread position: 377-723
Cow position: chr24:38726746-38726406 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 224
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 137

Conread position: 392-705
Cow position: chr24:39492014-39491709 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 394-731
Cow position: chr24:20286293-20285958 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 395-655
Cow position: chr24:6023467-6023209 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 396-554
Cow position: chr24:310489-310646 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 143, 0

Conread position: 396-562
Cow position: chr24:5991604-5991439 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 396-568
Cow position: chr24:44019130-44019301 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 143, 0

Conread position: 396-575
Cow position: chr24:12569639-12569817 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 150, 158

Conread position: 396-585
Cow position: chr24:6658873-6658685 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 0

Conread position: 396-607
Cow position: chr24:6323729-6323519 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 147, 0

Conread position: 396-676
Cow position: chr24:12238906-12239187 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 153

Conread position: 396-694
Cow position: chr24:35868963-35868672 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 396-708
Cow position: chr24:5776781-5776468 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 80

Conread position: 396-708
Cow position: chr24:17370400-17370105 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 274, 65

Conread position: 396-719
Cow position: chr24:7089378-7089059 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 396-719
Cow position: chr24:13189794-13190105 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 396-725
Cow position: chr24:6130430-6130749 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-725
Cow position: chr24:8150703-8150373 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 45

Conread position: 396-726
Cow position: chr24:12149673-12149341 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 158

Conread position: 396-727
Cow position: chr24:17957925-17957581 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 265

Conread position: 396-727
Cow position: chr24:37215390-37215062 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 24

Conread position: 396-727
Cow position: chr24:40101296-40100969 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 59

Conread position: 396-731
Cow position: chr24:6668138-6667809 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 64

Conread position: 396-731
Cow position: chr24:6963129-6962796 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 396-731
Cow position: chr24:7063161-7063494 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 144

Conread position: 396-731
Cow position: chr24:9090436-9090106 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 396-731
Cow position: chr24:13044006-13043674 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr24:13179398-13179070 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 396-731
Cow position: chr24:17322313-17322630 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 396-731
Cow position: chr24:19468986-19468654 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 396-731
Cow position: chr24:23504238-23503905 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr24:36557940-36557615 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 63

Conread position: 396-731
Cow position: chr24:40469747-40469422 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 46

Conread position: 397-606
Cow position: chr24:6061033-6061239 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 397-726
Cow position: chr24:6505026-6504701 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 207
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 251, 123

Conread position: 397-728
Cow position: chr24:30865121-30865446 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 22

Conread position: 397-731
Cow position: chr24:6338005-6338337 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 14

Conread position: 398-584
Cow position: chr24:6036612-6036797 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 69

Conread position: 398-684
Cow position: chr24:12204720-12204430 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 141

Conread position: 398-719
Cow position: chr24:19835030-19835346 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-719
Cow position: chr24:23094401-23094084 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 143

Conread position: 398-723
Cow position: chr24:36299030-36299355 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 291

Conread position: 398-724
Cow position: chr24:5887629-5887307 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 27

Conread position: 398-725
Cow position: chr24:13086860-13086536 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 96, 44

Conread position: 398-725
Cow position: chr24:14755622-14755947 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-725
Cow position: chr24:33935011-33935336 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-725
Cow position: chr24:41004110-41004437 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 89

Conread position: 398-730
Cow position: chr24:12087823-12088153 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-730
Cow position: chr24:14383005-14382676 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 140

Conread position: 398-730
Cow position: chr24:38585511-38585182 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 398-731
Cow position: chr24:146988-146655 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 250

Conread position: 398-731
Cow position: chr24:4413923-4413606 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 398-731
Cow position: chr24:6353759-6354089 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 22

Conread position: 398-731
Cow position: chr24:12127487-12127156 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr24:12334107-12333784 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 398-731
Cow position: chr24:14277382-14277038 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 89

Conread position: 398-731
Cow position: chr24:22972688-22973019 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position: chr24:29188910-29189241 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 398-731
Cow position: chr24:40468793-40469128 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 145

Conread position: 399-640
Cow position: chr24:9545679-9545920 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 399-726
Cow position: chr24:19703112-19703436 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 399-727
Cow position: chr24:16560694-16560359 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 158

Conread position: 399-731
Cow position: chr24:13301204-13300868 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 59, 43

Conread position: 399-731
Cow position: chr24:25438226-25438555 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 404-625
Cow position: chr24:6272962-6272745 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 145, 0

Conread position: 404-656
Cow position: chr24:35840265-35840011 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 50

Conread position: 404-671
Cow position: chr24:37199284-37199023 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 84, 34

Conread position: 404-683
Cow position: chr24:38639148-38639434 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 135, 228

Conread position: 404-731
Cow position: chr24:17410085-17410402 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 11, 148

Conread position: 405-548
Cow position: chr24:8606451-8606594 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 405-651
Cow position: chr24:29352224-29351985 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 405-692
Cow position: chr24:1493192-1493471 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 246, 114

Conread position: 407-719
Cow position: chr24:42584137-42583820 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 164, 65

Conread position: 410-705
Cow position: chr24:12107930-12107637 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 115

Conread position: 410-731
Cow position: chr24:13233884-13234202 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 410-731
Cow position: chr24:17300269-17299956 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 10

Conread position: 412-731
Cow position: chr24:39405078-39404758 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 69

Conread position: 414-713
Cow position: chr24:24074637-24074349 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 43

Conread position: 414-731
Cow position: chr24:39678950-39679278 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 206

Conread position: 427-723
Cow position: chr24:17927901-17927614 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 59

Conread position: 428-683
Cow position: chr24:13512139-13511887 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 149, 34

Conread position: 428-728
Cow position: chr24:28480235-28480518 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 34

Conread position: 432-723
Cow position: chr24:14766063-14766350 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 439-731
Cow position: chr24:17313013-17312731 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 73

Conread position: 443-723
Cow position: chr24:19183833-19184111 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 444-725
Cow position: chr24:23097093-23096816 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 448-725
Cow position: chr24:209335-209061 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 450-731
Cow position: chr24:16082825-16082546 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 456-723
Cow position: chr24:6250193-6249931 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 63

Conread position: 463-728
Cow position: chr24:13322511-13322781 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 137, 86

Conread position: 467-722
Cow position: chr24:2723782-2724027 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 468-729
Cow position: chr24:9073632-9073373 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 469-731
Cow position: chr24:11151430-11151174 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 476-713
Cow position: chr24:9081119-9080890 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 31

Conread position: 486-731
Cow position: chr24:16875406-16875161 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 13

Conread position: 489-731
Cow position: chr24:28031712-28031473 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 73

Conread position: 491-723
Cow position: chr24:5943369-5943591 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 495-724
Cow position: chr24:6344639-6344861 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 496-731
Cow position: chr24:40550344-40550577 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 501-724
Cow position: chr24:16648229-16648020 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 141, 49

Conread position: 514-728
Cow position: chr24:32847763-32847970 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 35

Conread position: 523-687
Cow position: chr24:42158515-42158353 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 542-719
Cow position: chr24:19641640-19641814 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 154, 19

Conread position: 542-731
Cow position: chr24:5991397-5991210 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 547-727
Cow position: chr24:18268731-18268551 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 552-731
Cow position: chr24:17032256-17032086 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 557-731
Cow position: chr24:36723831-36723998 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 582-708
Cow position: chr24:6658457-6658335 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 589-727
Cow position: chr24:30894582-30894717 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 601-730
Cow position: chr24:6439555-6439683 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 610-731
Cow position: chr24:28060127-28060247 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 616-727
Cow position: chr24:14377841-14377730 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.