Cow genome map
Conread name: | Ss1.1-Pig4-TMW8056B14.3 |
Conread position: | 273-411 |
Cow position: | chr25:29359321-29359184 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 273-411 |
Cow position: | chr25:29803487-29803624 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 278-397 |
Cow position: | chr25:34674201-34674082 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 278-411 |
Cow position: | chr25:13352256-13352124 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 278-411 |
Cow position: | chr25:14537375-14537507 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 278-413 |
Cow position: | chr25:27020044-27020178 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 289-397 |
Cow position: | chr25:20632168-20632060 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 86 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-400 |
Cow position: | chr25:41098907-41099018 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-404 |
Cow position: | chr25:34505538-34505653 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-409 |
Cow position: | chr25:24656157-24656277 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-411 |
Cow position: | chr25:34510471-34510592 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 289-411 |
Cow position: | chr25:35552966-35552845 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 289-412 |
Cow position: | chr25:32578383-32578505 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 290-412 |
Cow position: | chr25:18191113-18191234 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 370-620 |
Cow position: | chr25:16431590-16431347 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 165 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 181, 13 |
Conread position: | 381-676 |
Cow position: | chr25:32987560-32987261 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 198 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 139, 124 |
Conread position: | 383-607 |
Cow position: | chr25:26455031-26455254 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 155 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 142, 8 |
Conread position: | 394-708 |
Cow position: | chr25:29152476-29152166 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 11 |
Conread position: | 396-561 |
Cow position: | chr25:17558981-17558817 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 134 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 396-575 |
Cow position: | chr25:18485984-18485805 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 104, 124 |
Conread position: | 396-595 |
Cow position: | chr25:18273200-18273006 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 150 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 396-595 |
Cow position: | chr25:34238642-34238446 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 396-624 |
Cow position: | chr25:13062126-13061899 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 396-631 |
Cow position: | chr25:29358066-29358298 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 396-632 |
Cow position: | chr25:4532925-4532691 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 159 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 85, 140 |
Conread position: | 396-634 |
Cow position: | chr25:32581106-32581343 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 396-699 |
Cow position: | chr25:20346399-20346098 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 396-719 |
Cow position: | chr25:11931211-11930884 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 206 |
Conread position: | 396-719 |
Cow position: | chr25:18251352-18251044 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 225 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 188, 118 |
Conread position: | 396-719 |
Cow position: | chr25:19922124-19922445 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 396-722 |
Cow position: | chr25:18178269-18178598 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 109 |
Conread position: | 396-723 |
Cow position: | chr25:26928860-26929187 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 99 |
Conread position: | 396-726 |
Cow position: | chr25:2368583-2368901 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 396-726 |
Cow position: | chr25:13771962-13771642 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 224 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 396-728 |
Cow position: | chr25:35588751-35588421 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 116 |
Conread position: | 396-730 |
Cow position: | chr25:35627864-35627536 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 396-731 |
Cow position: | chr25:11041933-11042256 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 396-731 |
Cow position: | chr25:16924818-16924486 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 396-731 |
Cow position: | chr25:17587983-17587651 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 103 |
Conread position: | 396-731 |
Cow position: | chr25:19339015-19338683 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 396-731 |
Cow position: | chr25:33260809-33261123 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 221 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 396-731 |
Cow position: | chr25:41309532-41309207 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 225 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 158, 15 |
Conread position: | 396-731 |
Cow position: | chr25:41406664-41406986 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 225 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 133, 15 |
Conread position: | 397-638 |
Cow position: | chr25:33575354-33575119 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 167 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 146, 0 |
Conread position: | 397-683 |
Cow position: | chr25:20098000-20098281 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 202 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 38, 143 |
Conread position: | 397-723 |
Cow position: | chr25:23847640-23847337 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 214 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 397-728 |
Cow position: | chr25:10944005-10943676 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 221 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 86, 156 |
Conread position: | 398-638 |
Cow position: | chr25:18210581-18210343 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 166 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 47, 40 |
Conread position: | 398-649 |
Cow position: | chr25:25288560-25288807 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 175 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 398-719 |
Cow position: | chr25:22149127-22149461 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 227 |
Conread position: | 398-730 |
Cow position: | chr25:13782633-13782963 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 398-731 |
Cow position: | chr25:13693082-13692751 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 398-731 |
Cow position: | chr25:18305724-18306063 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 95 |
Conread position: | 398-731 |
Cow position: | chr25:18888158-18887827 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 398-731 |
Cow position: | chr25:20631210-20631540 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 398-731 |
Cow position: | chr25:25508293-25508619 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 398-731 |
Cow position: | chr25:27021010-27020681 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 398-731 |
Cow position: | chr25:34345418-34345088 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 400-722 |
Cow position: | chr25:26988671-26988980 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 218 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 52, 81 |
Conread position: | 404-620 |
Cow position: | chr25:12757530-12757311 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 137, 167 |
Conread position: | 405-731 |
Cow position: | chr25:30313852-30313539 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 212 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 410-731 |
Cow position: | chr25:24215899-24215585 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 223 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 17, 105 |
Conread position: | 413-708 |
Cow position: | chr25:19018584-19018300 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 203 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 130, 199 |
Conread position: | 414-640 |
Cow position: | chr25:18450937-18451159 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 159 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 415-729 |
Cow position: | chr25:40140092-40139788 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 212 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 417-731 |
Cow position: | chr25:12941068-12940756 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 420-731 |
Cow position: | chr25:28861214-28861524 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 123 |
Conread position: | 425-719 |
Cow position: | chr25:18325221-18324922 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 208 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 146, 29 |
Conread position: | 425-731 |
Cow position: | chr25:39556206-39555916 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 207 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 174, 10 |
Conread position: | 436-694 |
Cow position: | chr25:21545581-21545833 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 173 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 141, 81 |
Conread position: | 438-731 |
Cow position: | chr25:17656029-17656315 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 47 |
Conread position: | 443-731 |
Cow position: | chr25:27522994-27522713 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 445-731 |
Cow position: | chr25:13958435-13958724 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 206 |
Conread position: | 448-708 |
Cow position: | chr25:24055233-24055499 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 175 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 122, 91 |
Conread position: | 448-730 |
Cow position: | chr25:18192016-18191740 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 453-638 |
Cow position: | chr25:14956844-14956664 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 143 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 454-603 |
Cow position: | chr25:33664481-33664334 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 471-718 |
Cow position: | chr25:17548655-17548410 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 475-723 |
Cow position: | chr25:30285916-30285675 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 7, 63 |
Conread position: | 489-731 |
Cow position: | chr25:34506407-34506168 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 146 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 493-730 |
Cow position: | chr25:21965670-21965896 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 171 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 537-730 |
Cow position: | chr25:1077165-1077362 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 136 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 542-706 |
Cow position: | chr25:30267252-30267420 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 78, 110 |
Conread position: | 542-724 |
Cow position: | chr25:17558437-17558256 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 147 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 543-731 |
Cow position: | chr25:26354083-26354259 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 48, 59 |
Conread position: | 558-731 |
Cow position: | chr25:14538182-14538011 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 144 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 579-708 |
Cow position: | chr25:35649165-35649037 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 110 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 580-730 |
Cow position: | chr25:29308162-29308311 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 17, 67 |
Conread position: | 592-727 |
Cow position: | chr25:38616954-38616820 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 627-731 |
Cow position: | chr25:32579085-32578983 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 86 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.