Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 276-409
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-398
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-412
Cow position:
Alignm length: 135
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-412
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 280-411
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 284-411
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-403
Cow position:
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-409
Cow position:
Alignm length: 121
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-409
Cow position:
Alignm length: 121
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 289-412
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 289-412
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 304-413
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 370-667
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 16

Conread position: 373-731
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 168

Conread position: 383-664
Cow position:
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 11

Conread position: 391-723
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 304, 41

Conread position: 395-727
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 110

Conread position: 395-731
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 395-731
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 122, 9

Conread position: 396-595
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 150

Conread position: 396-605
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 97

Conread position: 396-607
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 0

Conread position: 396-619
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 155, 39

Conread position: 396-692
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 396-694
Cow position:
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 396-703
Cow position:
Alignm length: 309
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 158, 121

Conread position: 396-717
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 69

Conread position: 396-719
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 63

Conread position: 396-719
Cow position:
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 149

Conread position: 396-719
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 153, 224

Conread position: 396-719
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-721
Cow position:
Alignm length: 326
Alignm identity: 210
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 396-722
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 396-722
Cow position:
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 396-723
Cow position:
Alignm length: 332
Alignm identity: 206
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 66

Conread position: 396-724
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 149

Conread position: 396-725
Cow position:
Alignm length: 334
Alignm identity: 213
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 156

Conread position: 396-725
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 149

Conread position: 396-725
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 68

Conread position: 396-725
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 183

Conread position: 396-727
Cow position:
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 29

Conread position: 396-730
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 154

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 142

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 162, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 397-725
Cow position:
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 82

Conread position: 397-731
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 397-731
Cow position:
Alignm length: 335
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 398-663
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 398-674
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 398-719
Cow position:
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 142

Conread position: 398-719
Cow position:
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-719
Cow position:
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 252

Conread position: 398-721
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 398-723
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 233

Conread position: 398-725
Cow position:
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 144

Conread position: 398-726
Cow position:
Alignm length: 329
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-730
Cow position:
Alignm length: 333
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 144

Conread position: 398-731
Cow position:
Alignm length: 338
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 143

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 398-731
Cow position:
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 143

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 128

Conread position: 398-731
Cow position:
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 145

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 398-731
Cow position:
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 143

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 152

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 237

Conread position: 399-731
Cow position:
Alignm length: 333
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 401-730
Cow position:
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 137

Conread position: 403-731
Cow position:
Alignm length: 329
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 404-608
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 173, 139

Conread position: 404-726
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 38

Conread position: 404-728
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 55

Conread position: 404-731
Cow position:
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 405-682
Cow position:
Alignm length: 280
Alignm identity: 186
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 143, 49

Conread position: 405-725
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 239, 118

Conread position: 405-731
Cow position:
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 407-728
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 409-532
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 410-561
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 410-731
Cow position:
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 410-731
Cow position:
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 420-724
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 77, 59

Conread position: 420-730
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 14

Conread position: 435-717
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 117

Conread position: 435-731
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 442-731
Cow position:
Alignm length: 290
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 448-730
Cow position:
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 104

Conread position: 453-603
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 463-718
Cow position:
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 186

Conread position: 471-724
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 78

Conread position: 474-731
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 67

Conread position: 483-731
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 492-731
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 42

Conread position: 511-723
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 41

Conread position: 512-727
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 11

Conread position: 521-728
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 523-731
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 524-731
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 543-730
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 158, 67

Conread position: 543-731
Cow position:
Alignm length: 189
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 546-730
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 15

Conread position: 548-731
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 61

Conread position: 559-723
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 59

Conread position: 578-731
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 587-702
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 600-717
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 604-731
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 614-730
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 33

Show alignments to all cow chromosomes.