Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 273-411
Cow position: chr3:64653099-64652962 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 277-410
Cow position: chr3:72389387-72389255 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-397
Cow position: chr3:37971479-37971360 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 278-411
Cow position: chr3:1031399-1031267 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:13724288-13724420 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:15415897-15415765 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:18113259-18113391 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:18861870-18861738 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:19798725-19798857 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:19882903-19882771 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:32491745-32491613 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:32620614-32620746 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:39080955-39080823 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:49003598-49003466 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:49908585-49908717 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:57996545-57996413 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:64025703-64025835 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:66969452-66969584 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:68697540-68697672 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:68871322-68871454 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:68890144-68890276 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:74059904-74059772 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position: chr3:83766680-83766548 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-412
Cow position: chr3:30616509-30616642 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-412
Cow position: chr3:49998565-49998432 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 284-411
Cow position: chr3:62881787-62881661 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 288-411
Cow position: chr3:48525164-48525042 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 289-397
Cow position: chr3:10243071-10242963 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:15053299-15053404 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 289-397
Cow position: chr3:19590293-19590401 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:19754545-19754653 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:23009808-23009700 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:27920866-27920758 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:49135144-49135252 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:57482307-57482415 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position: chr3:69931417-69931525 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-400
Cow position: chr3:30320680-30320569 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-409
Cow position: chr3:40825814-40825694 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-409
Cow position: chr3:50124580-50124699 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 289-411
Cow position: chr3:7246691-7246812 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position: chr3:18461700-18461822 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 116

Conread position: 289-411
Cow position: chr3:24264617-24264496 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position: chr3:24586827-24586948 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 289-411
Cow position: chr3:29581081-29580960 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 289-411
Cow position: chr3:38868997-38868876 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position: chr3:72670139-72670258 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 289-411
Cow position: chr3:81167065-81167187 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 117

Conread position: 289-412
Cow position: chr3:15191734-15191612 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 289-412
Cow position: chr3:49733988-49733866 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 289-412
Cow position: chr3:49742880-49742758 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 290-411
Cow position: chr3:2871212-2871092 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 290-411
Cow position: chr3:27865590-27865471 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 290-411
Cow position: chr3:29641830-29641710 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 291-397
Cow position: chr3:64813033-64813138 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 292-396
Cow position: chr3:77426118-77426014 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 371-651
Cow position: chr3:63255561-63255839 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 15

Conread position: 375-731
Cow position: chr3:24457744-24457397 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 95

Conread position: 379-708
Cow position: chr3:69501177-69500842 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 11

Conread position: 386-731
Cow position: chr3:6662894-6663215 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 392-719
Cow position: chr3:19832456-19832138 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 95

Conread position: 393-731
Cow position: chr3:45975956-45976290 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 71

Conread position: 394-728
Cow position: chr3:37626442-37626769 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 395-512
Cow position: chr3:51938644-51938527 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 395-607
Cow position: chr3:58948989-58949198 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 148, 0

Conread position: 395-726
Cow position: chr3:63946602-63946911 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 25

Conread position: 395-731
Cow position: chr3:78908527-78908206 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 396-555
Cow position: chr3:2906296-2906138 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 142, 0

Conread position: 396-580
Cow position: chr3:18462378-18462202 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 396-597
Cow position: chr3:48229054-48228855 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 112, 0

Conread position: 396-604
Cow position: chr3:67164739-67164954 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 147, 0

Conread position: 396-605
Cow position: chr3:77425060-77425260 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 396-607
Cow position: chr3:31416475-31416687 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 149

Conread position: 396-626
Cow position: chr3:45034200-45034429 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 396-634
Cow position: chr3:1742792-1743029 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-638
Cow position: chr3:2509405-2509176 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 396-650
Cow position: chr3:37656825-37657071 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 149, 24

Conread position: 396-651
Cow position: chr3:20382497-20382750 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 396-678
Cow position: chr3:56100229-56099947 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 160, 252

Conread position: 396-697
Cow position: chr3:7313011-7312718 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 396-699
Cow position: chr3:8438501-8438786 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 146, 0

Conread position: 396-717
Cow position: chr3:62503587-62503897 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 396-718
Cow position: chr3:31319822-31320133 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 396-719
Cow position: chr3:16224345-16224667 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 154

Conread position: 396-719
Cow position: chr3:29575663-29575342 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-719
Cow position: chr3:39879566-39879247 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 24

Conread position: 396-719
Cow position: chr3:54291121-54290801 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-719
Cow position: chr3:71205887-71206197 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 396-725
Cow position: chr3:7478454-7478139 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 396-725
Cow position: chr3:24354605-24354933 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 228

Conread position: 396-725
Cow position: chr3:43481256-43481574 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 211
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 396-726
Cow position: chr3:15188270-15188597 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-727
Cow position: chr3:18558282-18558606 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 323, 39

Conread position: 396-727
Cow position: chr3:23944076-23943748 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 24

Conread position: 396-727
Cow position: chr3:55892849-55893164 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 247, 142

Conread position: 396-728
Cow position: chr3:27864635-27864961 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 396-730
Cow position: chr3:30617459-30617135 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 38

Conread position: 396-730
Cow position: chr3:56398714-56399038 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 159, 42

Conread position: 396-731
Cow position: chr3:2870249-2870582 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:2918930-2919258 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 396-731
Cow position: chr3:3524472-3524805 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:3840056-3839724 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 396-731
Cow position: chr3:4287547-4287878 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 143

Conread position: 396-731
Cow position: chr3:6687248-6687587 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 147

Conread position: 396-731
Cow position: chr3:6783829-6784159 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:6876721-6876397 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 24

Conread position: 396-731
Cow position: chr3:7157259-7156925 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 154

Conread position: 396-731
Cow position: chr3:7247995-7248326 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 396-731
Cow position: chr3:15054259-15053917 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 162

Conread position: 396-731
Cow position: chr3:16887433-16887108 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 138, 72

Conread position: 396-731
Cow position: chr3:18860878-18861215 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 143

Conread position: 396-731
Cow position: chr3:19799718-19799385 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:19880105-19880437 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:19940391-19940718 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 97

Conread position: 396-731
Cow position: chr3:19945706-19946041 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 151

Conread position: 396-731
Cow position: chr3:24644674-24645005 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 94

Conread position: 396-731
Cow position: chr3:27919888-27920200 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 396-731
Cow position: chr3:29329829-29329496 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:32200477-32200809 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-731
Cow position: chr3:32621580-32621251 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 396-731
Cow position: chr3:34505892-34505559 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:37970507-37970839 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:40338687-40338354 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:41209141-41208819 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 396-731
Cow position: chr3:44925523-44925857 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 145

Conread position: 396-731
Cow position: chr3:46859831-46859500 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 396-731
Cow position: chr3:47087745-47088066 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 396-731
Cow position: chr3:48057900-48057569 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 396-731
Cow position: chr3:51857230-51856897 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:56295646-56295979 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:56327565-56327912 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 157

Conread position: 396-731
Cow position: chr3:64026674-64026344 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 49

Conread position: 396-731
Cow position: chr3:64652070-64652399 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 396-731
Cow position: chr3:65208646-65208970 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 107

Conread position: 396-731
Cow position: chr3:66889509-66889174 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 143

Conread position: 396-731
Cow position: chr3:68698512-68698181 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 396-731
Cow position: chr3:68891110-68890783 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position: chr3:72671080-72670762 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 396-731
Cow position: chr3:74058987-74059319 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 396-731
Cow position: chr3:74851688-74851356 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 397-651
Cow position: chr3:70197684-70197938 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 183, 175

Conread position: 397-719
Cow position: chr3:82638551-82638874 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 127, 155

Conread position: 397-731
Cow position: chr3:58167137-58167465 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 240, 153

Conread position: 397-731
Cow position: chr3:59863024-59863356 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 397-731
Cow position: chr3:68872293-68871963 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-532
Cow position: chr3:47079947-47079813 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 398-543
Cow position: chr3:5884991-5885136 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 398-570
Cow position: chr3:51364326-51364155 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 141, 0

Conread position: 398-615
Cow position: chr3:69099377-69099165 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 398-640
Cow position: chr3:56338810-56338567 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 398-691
Cow position: chr3:66621659-66621949 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-708
Cow position: chr3:23288871-23288563 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 398-717
Cow position: chr3:64356503-64356178 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 145

Conread position: 398-719
Cow position: chr3:72631525-72631839 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 398-723
Cow position: chr3:5952724-5952404 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 398-723
Cow position: chr3:36877198-36876860 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 260

Conread position: 398-725
Cow position: chr3:21181235-21180910 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-725
Cow position: chr3:49601342-49601009 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 216
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 58

Conread position: 398-725
Cow position: chr3:78025958-78025635 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-727
Cow position: chr3:50916809-50917122 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 398-728
Cow position: chr3:21028155-21027829 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 144

Conread position: 398-728
Cow position: chr3:40824855-40825183 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 398-730
Cow position: chr3:63240781-63240451 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:2709407-2709076 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position: chr3:18812961-18813293 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 230

Conread position: 398-731
Cow position: chr3:19755499-19755170 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 398-731
Cow position: chr3:23206411-23206082 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:24444638-24444308 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:36862995-36862664 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position: chr3:42448578-42448899 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:43191829-43191498 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:49136103-49135771 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 398-731
Cow position: chr3:49562211-49561881 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 50

Conread position: 398-731
Cow position: chr3:53517072-53517403 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:56146767-56147095 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:57483263-57482932 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position: chr3:58784693-58784362 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position: chr3:69932371-69932042 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 402-731
Cow position: chr3:2367870-2367562 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 402-731
Cow position: chr3:46504017-46504343 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 404-719
Cow position: chr3:77444874-77445182 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 404-725
Cow position: chr3:4736457-4736143 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 136

Conread position: 404-725
Cow position: chr3:34029452-34029135 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 404-731
Cow position: chr3:25687717-25688034 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 405-717
Cow position: chr3:19889190-19888881 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 405-730
Cow position: chr3:4029202-4029525 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 138

Conread position: 405-730
Cow position: chr3:75184877-75185197 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 7, 95

Conread position: 405-731
Cow position: chr3:595596-595920 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 405-731
Cow position: chr3:58127263-58127580 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 405-731
Cow position: chr3:79122138-79121817 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 407-731
Cow position: chr3:19720188-19719864 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 178

Conread position: 410-671
Cow position: chr3:67769285-67769536 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 168, 10

Conread position: 410-715
Cow position: chr3:16076821-16077116 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 28

Conread position: 410-722
Cow position: chr3:5993612-5993302 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 33

Conread position: 410-731
Cow position: chr3:10242128-10242447 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 410-731
Cow position: chr3:30316021-30316341 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 410-731
Cow position: chr3:38868062-38868385 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 240

Conread position: 411-708
Cow position: chr3:29580085-29580391 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 228

Conread position: 411-717
Cow position: chr3:46017511-46017821 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 37

Conread position: 411-725
Cow position: chr3:54772434-54772745 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 49

Conread position: 411-727
Cow position: chr3:33634724-33635028 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 411-731
Cow position: chr3:77578660-77578356 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 412-724
Cow position: chr3:8976187-8976486 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 8

Conread position: 413-719
Cow position: chr3:52661293-52661600 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 67

Conread position: 415-707
Cow position: chr3:62772569-62772851 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 415-731
Cow position: chr3:49543732-49543418 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 420-723
Cow position: chr3:65240578-65240871 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 95

Conread position: 420-728
Cow position: chr3:49334557-49334875 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 216

Conread position: 420-731
Cow position: chr3:38494719-38495033 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 82

Conread position: 420-731
Cow position: chr3:57978936-57978631 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 134, 92

Conread position: 423-698
Cow position: chr3:5430071-5429804 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 137, 33

Conread position: 443-568
Cow position: chr3:38095464-38095588 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 443-725
Cow position: chr3:71145905-71145621 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 43

Conread position: 446-726
Cow position: chr3:3058523-3058789 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 448-652
Cow position: chr3:83742151-83741951 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 34

Conread position: 451-731
Cow position: chr3:57454513-57454791 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 235, 98

Conread position: 453-721
Cow position: chr3:5948112-5947854 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 96

Conread position: 456-725
Cow position: chr3:73530011-73530276 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 463-731
Cow position: chr3:72388940-72388662 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 199

Conread position: 464-730
Cow position: chr3:74427555-74427290 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 174, 78

Conread position: 464-731
Cow position: chr3:71141275-71141026 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 235, 76

Conread position: 467-648
Cow position: chr3:64015851-64015672 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 468-648
Cow position: chr3:68213285-68213465 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 39

Conread position: 468-731
Cow position: chr3:50126026-50125779 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 470-731
Cow position: chr3:13725249-13724991 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 472-724
Cow position: chr3:53049285-53049044 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 65

Conread position: 479-731
Cow position: chr3:63002069-63001821 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 51, 21

Conread position: 483-730
Cow position: chr3:64814617-64814382 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 485-719
Cow position: chr3:64823869-64824106 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 114

Conread position: 485-726
Cow position: chr3:44567651-44567414 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 485-731
Cow position: chr3:65918936-65919178 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 489-717
Cow position: chr3:68356604-68356385 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 490-731
Cow position: chr3:69436903-69436666 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 59

Conread position: 495-730
Cow position: chr3:30330583-30330350 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 496-731
Cow position: chr3:29190530-29190281 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 53

Conread position: 506-692
Cow position: chr3:67656483-67656663 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 506-731
Cow position: chr3:39024442-39024666 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 511-731
Cow position: chr3:64685525-64685309 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 99, 0

Conread position: 522-731
Cow position: chr3:1886840-1886633 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 540-700
Cow position: chr3:2905792-2905631 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 66

Conread position: 541-731
Cow position: chr3:26722786-26722973 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 542-731
Cow position: chr3:73303128-73303311 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 100, 32

Conread position: 545-731
Cow position: chr3:28669696-28669875 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 554-726
Cow position: chr3:11511227-11511062 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 64

Conread position: 554-731
Cow position: chr3:67656836-67657007 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 557-731
Cow position: chr3:64274720-64274892 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 20, 29

Conread position: 561-723
Cow position: chr3:24587929-24587769 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 561-731
Cow position: chr3:18114069-18113900 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 572-722
Cow position: chr3:21002102-21002251 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 578-719
Cow position: chr3:54864346-54864205 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 578-731
Cow position: chr3:3783383-3783536 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 578-731
Cow position: chr3:3787243-3787396 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 578-731
Cow position: chr3:3937506-3937653 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 582-731
Cow position: chr3:5885148-5885296 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 583-730
Cow position: chr3:54740713-54740567 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 586-719
Cow position: chr3:34089678-34089547 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 587-731
Cow position: chr3:1029069-1029212 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 591-717
Cow position: chr3:31416848-31416973 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 592-729
Cow position: chr3:48844650-48844786 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 592-731
Cow position: chr3:54654438-54654576 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 594-731
Cow position: chr3:41081823-41081959 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 602-731
Cow position: chr3:64813752-64813624 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 604-731
Cow position: chr3:77425371-77425497 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 605-731
Cow position: chr3:26744190-26744065 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 610-731
Cow position: chr3:2853728-2853609 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 620-729
Cow position: chr3:45034677-45034785 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 624-731
Cow position: chr3:36690472-36690366 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 630-731
Cow position: chr3:26683287-26683387 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.