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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8056C10.5
        

               
Conread position:
               
11-275
               

               
Cow position:
               
chr21:2550202-2550466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
13-217
               

               
Cow position:
               
chr21:25764616-25764820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
13-232
               

               
Cow position:
               
chr21:21982791-21983003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
13-275
               

               
Cow position:
               
chr21:11456826-11456565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr21:28924092-28924383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr21:36756581-36756867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr21:71566-71849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr21:19067512-19067796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr21:37299442-37299723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
13-299
               

               
Cow position:
               
chr21:24296783-24296501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
13-315
               

               
Cow position:
               
chr21:47760751-47761052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
13-316
               

               
Cow position:
               
chr21:28919542-28919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr21:38918185-38918488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 55
               

               
Conread position:
               
14-124
               

               
Cow position:
               
chr21:39450180-39450068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
14-131
               

               
Cow position:
               
chr21:44108984-44109101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-136
               

               
Cow position:
               
chr21:34727257-34727132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
14-138
               

               
Cow position:
               
chr21:45439256-45439131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
14-148
               

               
Cow position:
               
chr21:426789-426923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
14-158
               

               
Cow position:
               
chr21:33360050-33359917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
14-158
               

               
Cow position:
               
chr21:38664620-38664765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
14-168
               

               
Cow position:
               
chr21:44515246-44515400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chr21:297735-297902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chr21:43357275-43357108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
14-183
               

               
Cow position:
               
chr21:42540239-42540071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
14-183
               

               
Cow position:
               
chr21:45330618-45330456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chr21:33997244-33997073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
14-189
               

               
Cow position:
               
chr21:10090010-10089835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
14-198
               

               
Cow position:
               
chr21:36789774-36789962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr21:8125820-8125637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
14-201
               

               
Cow position:
               
chr21:42022265-42022444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
14-201
               

               
Cow position:
               
chr21:45915727-45915549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr21:44214107-44214298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
14-206
               

               
Cow position:
               
chr21:8235571-8235388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
14-206
               

               
Cow position:
               
chr21:40192318-40192131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr21:8206751-8206947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr21:10673111-10673298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr21:31662448-31662644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr21:37235368-37235562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr21:21077590-21077780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr21:33414102-33413908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr21:44671734-44671924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr21:395853-396048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr21:1059061-1059257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
196, 77
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr21:10001058-10001256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr21:13365321-13365523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr21:28626223-28626418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
14-214
               

               
Cow position:
               
chr21:22465180-22465372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
14-214
               

               
Cow position:
               
chr21:42209648-42209447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr21:28191014-28191217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr21:46552122-46551916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr21:45262828-45262623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr21:17690177-17690382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr21:31691465-31691670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr21:33729413-33729619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr21:29484962-29485168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr21:45473769-45473567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr21:712910-713136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr21:3400851-3400639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr21:5392557-5392344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 191
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr21:11360022-11360217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr21:17008963-17009174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr21:4280690-4280481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr21:27429442-27429647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr21:36909918-36910128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:734579-734789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:10514787-10515002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:12801769-12801549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 192
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:13128113-13127899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
155, 23
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:18790576-18790366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:26244903-26245114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:30250213-30250004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
199, 42
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:46264155-46264370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 6
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr21:19874369-19874152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr21:23801145-23800926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr21:7564334-7564102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr21:9940207-9939985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr21:33727482-33727257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 186
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr21:45355819-45356038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr21:39401577-39401810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr21:9990493-9990727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr21:45329963-45329738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
14-258
               

               
Cow position:
               
chr21:19258807-19259039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
14-258
               

               
Cow position:
               
chr21:47764132-47763894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
14-270
               

               
Cow position:
               
chr21:29978777-29978528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
14-273
               

               
Cow position:
               
chr21:41579739-41579993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chr21:7377944-7377684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr21:829227-828970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr21:46912523-46912789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
14-283
               

               
Cow position:
               
chr21:10410203-10410471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr21:10561601-10561336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr21:34049896-34049640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr21:17193770-17193496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 194
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr21:29069346-29069071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr21:46849144-46848881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr21:20160661-20160935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr21:22121501-22121759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr21:47465138-47464862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr21:47714022-47713750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 58
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr21:1511274-1511544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr21:11644987-11644707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
55, 216
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:868942-868660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:5898416-5898150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:6051490-6051764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:11779546-11779279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:15544235-15543980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:22210261-22209984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 60
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:28733931-28733653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:42135637-42135360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr21:23672733-23673006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 58
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:33704-33996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:957655-957932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:4399786-4400056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:7394365-7394632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:8426429-8426706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:13585071-13584789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:20152937-20153220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 172
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:22014170-22014454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:27229811-27229540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 124
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:30222326-30222605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:39888765-39888463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:41522424-41522150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr21:42841617-42841322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
14-305
               

               
Cow position:
               
chr21:13840308-13840598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 141
               

               
Conread position:
               
14-305
               

               
Cow position:
               
chr21:20260338-20260027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
14-305
               

               
Cow position:
               
chr21:37706436-37706142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr21:12154116-12154401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr21:13089487-13089191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr21:34654059-34654346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
14-316
               

               
Cow position:
               
chr21:742268-742557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
285, 99
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr21:13713857-13713555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr21:21907446-21907159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr21:27521348-27521060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr21:30218210-30217935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr21:33982823-33982527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
282, 49
               

               
Conread position:
               
14-320
               

               
Cow position:
               
chr21:18155584-18155278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
14-320
               

               
Cow position:
               
chr21:44251858-44251556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr21:19060104-19059804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr21:22856203-22856511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr21:49700051-49699752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr21:14464567-14464871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
14-323
               

               
Cow position:
               
chr21:4281888-4281596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
14-323
               

               
Cow position:
               
chr21:47719322-47719018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr21:15584437-15584136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
14-325
               

               
Cow position:
               
chr21:40266107-40266415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
14-325
               

               
Cow position:
               
chr21:45906638-45906333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
14-327
               

               
Cow position:
               
chr21:29002175-29001853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
14-327
               

               
Cow position:
               
chr21:38720235-38720539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr21:41617757-41617447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
14-329
               

               
Cow position:
               
chr21:25127585-25127906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
14-330
               

               
Cow position:
               
chr21:9036282-9036597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 213
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr21:16569884-16570185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
14-339
               

               
Cow position:
               
chr21:641569-641891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
14-353
               

               
Cow position:
               
chr21:938011-938339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
15-182
               

               
Cow position:
               
chr21:16187824-16187657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
15-211
               

               
Cow position:
               
chr21:25382998-25383205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr21:33350724-33350941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr21:40168643-40168427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chr21:17723001-17723232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
15-293
               

               
Cow position:
               
chr21:38449463-38449194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
15-294
               

               
Cow position:
               
chr21:23586864-23587131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 171
               

               
Conread position:
               
15-299
               

               
Cow position:
               
chr21:23568205-23568489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
15-306
               

               
Cow position:
               
chr21:16152420-16152711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 215
               

               
Conread position:
               
15-317
               

               
Cow position:
               
chr21:20165625-20165920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
15-317
               

               
Cow position:
               
chr21:29658264-29658557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
15-318
               

               
Cow position:
               
chr21:11740137-11739841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
15-349
               

               
Cow position:
               
chr21:18568656-18568324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
16-130
               

               
Cow position:
               
chr21:6102275-6102164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
16-130
               

               
Cow position:
               
chr21:22720211-22720325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-154
               

               
Cow position:
               
chr21:10727262-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
16-164
               

               
Cow position:
               
chr21:32454888-32455036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr21:17929853-17929688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr21:34390990-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
122, 49
               

               
Conread position:
               
16-183
               

               
Cow position:
               
chr21:15611131-15611291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr21:41878456-41878624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
16-189
               

               
Cow position:
               
chr21:20418699-20418525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr21:4998501-4998334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr21:46141029-46141210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
16-201
               

               
Cow position:
               
chr21:13036915-13036737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
16-201
               

               
Cow position:
               
chr21:15911385-15911569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
16-207
               

               
Cow position:
               
chr21:1591537-1591722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
16-208
               

               
Cow position:
               
chr21:471662-471850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr21:6758332-6758521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr21:45921073-45920879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
16-214
               

               
Cow position:
               
chr21:28810274-28810080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
110, 12
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr21:15976618-15976822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr21:28429428-28429632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr21:10118544-10118756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr21:25628925-25628720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr21:23322093-23321885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
16-227
               

               
Cow position:
               
chr21:724901-724696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 116
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr21:19673790-19674005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:3818195-3818408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:10538265-10538055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:10633655-10633443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:16696354-16696573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:19513850-19514054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:24642505-24642712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:30157823-30157606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:36795585-36795803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr21:37345112-37344904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
16-237
               

               
Cow position:
               
chr21:10823552-10823763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
16-237
               

               
Cow position:
               
chr21:34739827-34740049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 212
               

               
Conread position:
               
16-251
               

               
Cow position:
               
chr21:42007478-42007243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
16-258
               

               
Cow position:
               
chr21:9416233-9416473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr21:6017604-6017858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 184
               

               
Conread position:
               
16-273
               

               
Cow position:
               
chr21:19615159-19615410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
16-276
               

               
Cow position:
               
chr21:6624145-6624400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
16-285
               

               
Cow position:
               
chr21:37790015-37789752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
16-286
               

               
Cow position:
               
chr21:6317695-6317434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
16-286
               

               
Cow position:
               
chr21:10883939-10883667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
16-286
               

               
Cow position:
               
chr21:28237727-28237448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr21:37014417-37014173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr21:30835348-30835623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr21:6713541-6713265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr21:15445088-15444823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr21:30848963-30848689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr21:42501024-42501311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 205
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr21:8349313-8349582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr21:36910725-36910997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
16-296
               

               
Cow position:
               
chr21:29014928-29014656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:3585382-3585101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:8950165-8950456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 186
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:9311030-9311318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:10007654-10007374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:10657117-10656838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:11027368-11027095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:12461985-12461706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 198
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:14452221-14452496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:14597431-14597157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:17890288-17890566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:23535698-23535976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:40899326-40899604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:41140732-41140452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:41621109-41621391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr21:45971186-45970916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr21:7673105-7673377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr21:17982961-17983235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
16-301
               

               
Cow position:
               
chr21:17875206-17874924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
16-303
               

               
Cow position:
               
chr21:15545378-15545094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr21:5238371-5238659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr21:8961489-8961213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr21:43388336-43388631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
16-306
               

               
Cow position:
               
chr21:31253529-31253806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
233, 42
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr21:13035059-13034758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr21:18064928-18064651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
16-314
               

               
Cow position:
               
chr21:5426926-5427204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
16-314
               

               
Cow position:
               
chr21:24222553-24222238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
16-316
               

               
Cow position:
               
chr21:41155848-41156150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr21:47022-47326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 297
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr21:6834035-6834330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr21:40432435-40432744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr21:40786663-40786963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
16-319
               

               
Cow position:
               
chr21:12559682-12559989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 234
               

               
Conread position:
               
16-319
               

               
Cow position:
               
chr21:38900763-38901044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
16-320
               

               
Cow position:
               
chr21:16914761-16915061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
16-321
               

               
Cow position:
               
chr21:19196177-19195876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
16-323
               

               
Cow position:
               
chr21:41974390-41974080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
194, 46
               

               
Conread position:
               
16-324
               

               
Cow position:
               
chr21:10004902-10004595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
16-324
               

               
Cow position:
               
chr21:47363753-47363433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
16-326
               

               
Cow position:
               
chr21:17559944-17559627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr21:13048210-13047901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
124, 292
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr21:18318698-18319008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr21:30231706-30231404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
16-329
               

               
Cow position:
               
chr21:40589500-40589186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
16-330
               

               
Cow position:
               
chr21:44724380-44724088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
16-331
               

               
Cow position:
               
chr21:17183908-17184214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
16-334
               

               
Cow position:
               
chr21:27863530-27863221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr21:5464732-5465051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
17-158
               

               
Cow position:
               
chr21:9862582-9862439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
17-178
               

               
Cow position:
               
chr21:46143944-46144105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr21:802321-802060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
17-317
               

               
Cow position:
               
chr21:17455372-17455664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
18-173
               

               
Cow position:
               
chr21:11250866-11251010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
18-181
               

               
Cow position:
               
chr21:30607102-30606937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-196
               

               
Cow position:
               
chr21:18850241-18850059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 111
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr21:42414114-42413900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 196
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr21:42384497-42384709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
18-250
               

               
Cow position:
               
chr21:21169505-21169278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
18-280
               

               
Cow position:
               
chr21:41198417-41198152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 255
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr21:28030275-28030539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
18-311
               

               
Cow position:
               
chr21:28244456-28244742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 94
               

               
Conread position:
               
20-209
               

               
Cow position:
               
chr21:6387989-6388176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr21:7583833-7584034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
20-286
               

               
Cow position:
               
chr21:10114344-10114082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr21:14126276-14126532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr21:32339748-32339469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr21:33580410-33580690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
20-330
               

               
Cow position:
               
chr21:32393061-32392768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
21-213
               

               
Cow position:
               
chr21:13395586-13395779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr21:24858303-24858574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 195
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr21:29214169-29213900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr21:10264022-10264298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
21-311
               

               
Cow position:
               
chr21:10147981-10148274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
21-315
               

               
Cow position:
               
chr21:48527400-48527696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
21-327
               

               
Cow position:
               
chr21:9301203-9301517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
22-209
               

               
Cow position:
               
chr21:40769281-40769470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
22-212
               

               
Cow position:
               
chr21:9334475-9334668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr21:26648020-26647826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
22-223
               

               
Cow position:
               
chr21:30980587-30980387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
22-258
               

               
Cow position:
               
chr21:7768425-7768658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 196
               

               
Conread position:
               
22-289
               

               
Cow position:
               
chr21:10261271-10261527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr21:27569182-27568896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
22-315
               

               
Cow position:
               
chr21:18289654-18289958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
22-316
               

               
Cow position:
               
chr21:12104354-12104632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
22-318
               

               
Cow position:
               
chr21:23980189-23979898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
23-194
               

               
Cow position:
               
chr21:14441827-14441999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
23-225
               

               
Cow position:
               
chr21:29014570-29014365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
23-237
               

               
Cow position:
               
chr21:3254141-3254356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 205
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr21:36696098-36695832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr21:37479943-37480223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
23-319
               

               
Cow position:
               
chr21:41590576-41590284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
23-321
               

               
Cow position:
               
chr21:9418164-9417860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
202, 29
               

               
Conread position:
               
23-328
               

               
Cow position:
               
chr21:26563167-26562868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr21:19360181-19359976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
27-217
               

               
Cow position:
               
chr21:24598650-24598842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr21:44861112-44860944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
31-221
               

               
Cow position:
               
chr21:27341593-27341406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
31-233
               

               
Cow position:
               
chr21:9027312-9027514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 164
               

               
Conread position:
               
31-251
               

               
Cow position:
               
chr21:977143-976924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
32-166
               

               
Cow position:
               
chr21:11198147-11198014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
32-184
               

               
Cow position:
               
chr21:29405214-29405069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
32-187
               

               
Cow position:
               
chr21:13738563-13738707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
32-212
               

               
Cow position:
               
chr21:2810167-2809985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
32-223
               

               
Cow position:
               
chr21:28989609-28989803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
32-229
               

               
Cow position:
               
chr21:18779970-18779779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
32-229
               

               
Cow position:
               
chr21:43259224-43259416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr21:33563011-33563203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
32-237
               

               
Cow position:
               
chr21:12301515-12301307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
32-244
               

               
Cow position:
               
chr21:31159404-31159608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr21:14760573-14760808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr21:34151585-34151827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 100
               

               
Conread position:
               
32-287
               

               
Cow position:
               
chr21:1764863-1764606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 31
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr21:12739080-12739347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr21:36508242-36508489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr21:41918245-41917980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr21:6997941-6998203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr21:40134161-40134409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr21:46132576-46132855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
32-299
               

               
Cow position:
               
chr21:44565719-44565465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr21:3763738-3763469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr21:8546017-8545731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr21:13752874-13753159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr21:22718783-22718498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr21:30256269-30255961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
173, 33
               

               
Conread position:
               
32-350
               

               
Cow position:
               
chr21:13588763-13589072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
33-225
               

               
Cow position:
               
chr21:7581900-7581712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
33-258
               

               
Cow position:
               
chr21:17642982-17642766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr21:12916419-12916155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr21:19868955-19868699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr21:30592305-30592051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
34-194
               

               
Cow position:
               
chr21:20183074-20183233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
34-202
               

               
Cow position:
               
chr21:28955511-28955671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
34-213
               

               
Cow position:
               
chr21:38121102-38121282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
34-248
               

               
Cow position:
               
chr21:28599892-28600096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr21:643327-643560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr21:10292495-10292745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr21:41287792-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
34-292
               

               
Cow position:
               
chr21:7169689-7169944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
34-294
               

               
Cow position:
               
chr21:46599362-46599617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr21:44825888-44825612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
34-314
               

               
Cow position:
               
chr21:16604315-16604037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr21:37640560-37640858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
34-326
               

               
Cow position:
               
chr21:13656632-13656347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr21:8431099-8430802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
34-331
               

               
Cow position:
               
chr21:32559358-32559076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr21:31701952-31701649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
35-217
               

               
Cow position:
               
chr21:41828162-41827973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr21:23460145-23460299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
39-206
               

               
Cow position:
               
chr21:27406250-27406070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
39-223
               

               
Cow position:
               
chr21:2657816-2658002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
39-317
               

               
Cow position:
               
chr21:9477175-9477447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
39-322
               

               
Cow position:
               
chr21:39319406-39319124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 231
               

               
Conread position:
               
39-327
               

               
Cow position:
               
chr21:44114122-44113842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr21:41046813-41046985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
41-284
               

               
Cow position:
               
chr21:3361004-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
43-252
               

               
Cow position:
               
chr21:36149472-36149679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
44-201
               

               
Cow position:
               
chr21:37384498-37384652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
44-209
               

               
Cow position:
               
chr21:5566998-5567163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
44-294
               

               
Cow position:
               
chr21:13889634-13889395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
44-294
               

               
Cow position:
               
chr21:39664387-39664139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
44-321
               

               
Cow position:
               
chr21:36682334-36682608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 212
               

               
Conread position:
               
46-220
               

               
Cow position:
               
chr21:10151813-10151993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
47-329
               

               
Cow position:
               
chr21:10130158-10130443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
48-286
               

               
Cow position:
               
chr21:8351297-8351043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 198
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr21:8713944-8713658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
49-275
               

               
Cow position:
               
chr21:8241931-8242155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr21:13842507-13842753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr21:42463669-42463494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
51-286
               

               
Cow position:
               
chr21:41107757-41107525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
52-206
               

               
Cow position:
               
chr21:7823381-7823538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
52-294
               

               
Cow position:
               
chr21:11353080-11353323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr21:28907523-28907287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
52-298
               

               
Cow position:
               
chr21:13580434-13580678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr21:46612774-46612516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
53-246
               

               
Cow position:
               
chr21:26567759-26567561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
53-299
               

               
Cow position:
               
chr21:20213757-20213507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
53-313
               

               
Cow position:
               
chr21:17511797-17512052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
53-333
               

               
Cow position:
               
chr21:18059941-18059658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
87, 117
               

               
Conread position:
               
54-325
               

               
Cow position:
               
chr21:13944097-13943826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
55-282
               

               
Cow position:
               
chr21:2292978-2292750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
55-316
               

               
Cow position:
               
chr21:19407555-19407289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
55-334
               

               
Cow position:
               
chr21:27145968-27145685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
56-317
               

               
Cow position:
               
chr21:10423131-10423393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 157
               

               
Conread position:
               
57-218
               

               
Cow position:
               
chr21:42348668-42348510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
57-230
               

               
Cow position:
               
chr21:11057854-11057681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
57-271
               

               
Cow position:
               
chr21:49276158-49276373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
57-295
               

               
Cow position:
               
chr21:17515828-17516070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
57-321
               

               
Cow position:
               
chr21:6584113-6583853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
58-215
               

               
Cow position:
               
chr21:17062950-17063104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr21:37835603-37835862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr21:25344888-25345151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
62-229
               

               
Cow position:
               
chr21:44592180-44592013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
62-231
               

               
Cow position:
               
chr21:30119723-30119893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
62-232
               

               
Cow position:
               
chr21:46470216-46470387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
62-327
               

               
Cow position:
               
chr21:18471606-18471867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
62-329
               

               
Cow position:
               
chr21:26018409-26018674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
62-334
               

               
Cow position:
               
chr21:17637921-17638193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 252
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr21:46809740-46809506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr21:12366401-12366636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr21:27677512-27677746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
64-232
               

               
Cow position:
               
chr21:17265970-17265798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
64-237
               

               
Cow position:
               
chr21:34475093-34475264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
64-298
               

               
Cow position:
               
chr21:16498549-16498778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
64-317
               

               
Cow position:
               
chr21:11174270-11174527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
64-322
               

               
Cow position:
               
chr21:36023159-36022899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr21:7785248-7785527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
64-349
               

               
Cow position:
               
chr21:38728185-38728471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 147
               

               
Conread position:
               
65-205
               

               
Cow position:
               
chr21:12207770-12207629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
65-218
               

               
Cow position:
               
chr21:9028648-9028803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
65-282
               

               
Cow position:
               
chr21:18493341-18493119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
65-291
               

               
Cow position:
               
chr21:13462746-13462974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 194
               

               
Conread position:
               
65-295
               

               
Cow position:
               
chr21:10072189-10072426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
65-311
               

               
Cow position:
               
chr21:31279288-31279527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
65-317
               

               
Cow position:
               
chr21:40475532-40475783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
65-319
               

               
Cow position:
               
chr21:17403818-17403563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
76, 241
               

               
Conread position:
               
65-324
               

               
Cow position:
               
chr21:12310509-12310765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
65-329
               

               
Cow position:
               
chr21:11706723-11706470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
65-330
               

               
Cow position:
               
chr21:12322534-12322794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
66-275
               

               
Cow position:
               
chr21:1483512-1483714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr21:22850954-22851175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr21:36763095-36763335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
66-327
               

               
Cow position:
               
chr21:43692850-43693105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
67-314
               

               
Cow position:
               
chr21:10817065-10817313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr21:42144860-42145098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
67-347
               

               
Cow position:
               
chr21:31760179-31759916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
258, 60
               

               
Conread position:
               
68-197
               

               
Cow position:
               
chr21:8231642-8231513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
68-213
               

               
Cow position:
               
chr21:46451917-46451773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
68-214
               

               
Cow position:
               
chr21:26837914-26838053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
68-214
               

               
Cow position:
               
chr21:27081081-27081226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
68-221
               

               
Cow position:
               
chr21:41597846-41598000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
68-222
               

               
Cow position:
               
chr21:42562667-42562816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
68-232
               

               
Cow position:
               
chr21:8213243-8213085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
68-232
               

               
Cow position:
               
chr21:27624732-27624899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
68-245
               

               
Cow position:
               
chr21:19766889-19767067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
68-275
               

               
Cow position:
               
chr21:36177194-36177399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
68-284
               

               
Cow position:
               
chr21:7825156-7824941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
68-287
               

               
Cow position:
               
chr21:11625778-11625998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
68-288
               

               
Cow position:
               
chr21:7066346-7066132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
133, 96
               

               
Conread position:
               
68-289
               

               
Cow position:
               
chr21:24266530-24266307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
68-295
               

               
Cow position:
               
chr21:17252943-17252717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
68-295
               

               
Cow position:
               
chr21:24797692-24797915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr21:6851207-6851428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr21:24061156-24060929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr21:32297484-32297245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr21:37838031-37837815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr21:41610202-41610442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
68-305
               

               
Cow position:
               
chr21:9278558-9278798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
68-305
               

               
Cow position:
               
chr21:44074726-44074961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
68-313
               

               
Cow position:
               
chr21:5970805-5970569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 153
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr21:11755730-11755483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr21:15271412-15271157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
68-317
               

               
Cow position:
               
chr21:48334755-48334505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
68-318
               

               
Cow position:
               
chr21:19083564-19083304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
68-319
               

               
Cow position:
               
chr21:10858843-10859095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
68-322
               

               
Cow position:
               
chr21:41546743-41546996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
68-328
               

               
Cow position:
               
chr21:24343232-24342971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
68-328
               

               
Cow position:
               
chr21:35084562-35084299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr21:12749204-12748940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
68-331
               

               
Cow position:
               
chr21:17364445-17364182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 172
               

               
Conread position:
               
68-346
               

               
Cow position:
               
chr21:19702766-19703038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
69-232
               

               
Cow position:
               
chr21:5342058-5341893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
69-237
               

               
Cow position:
               
chr21:18135836-18135669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
69-279
               

               
Cow position:
               
chr21:10978912-10978703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 126
               

               
Conread position:
               
69-294
               

               
Cow position:
               
chr21:21615818-21616035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 143
               

               
Conread position:
               
69-295
               

               
Cow position:
               
chr21:48637720-48637496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr21:19958250-19958479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr21:20032802-20032569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr21:42328629-42328398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
69-307
               

               
Cow position:
               
chr21:40571419-40571200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
69-312
               

               
Cow position:
               
chr21:21968847-21969091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
69-316
               

               
Cow position:
               
chr21:46776964-46776715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr21:31652424-31652669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
69-321
               

               
Cow position:
               
chr21:44829723-44829473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 229
               

               
Conread position:
               
69-326
               

               
Cow position:
               
chr21:10980394-10980654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr21:9504902-9505159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 236
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr21:19561532-19561270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
70-223
               

               
Cow position:
               
chr21:22939804-22939961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr21:7221303-7221149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
70-246
               

               
Cow position:
               
chr21:17710673-17710848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
70-256
               

               
Cow position:
               
chr21:20318550-20318740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
70-288
               

               
Cow position:
               
chr21:29979733-29979519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 150
               

               
Conread position:
               
70-298
               

               
Cow position:
               
chr21:17519057-17519291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
70-314
               

               
Cow position:
               
chr21:13849798-13849553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
70-317
               

               
Cow position:
               
chr21:5218738-5218988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr21:10743424-10743683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
233, 244
               

               
Conread position:
               
71-195
               

               
Cow position:
               
chr21:7088638-7088764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
71-216
               

               
Cow position:
               
chr21:5153659-5153804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
71-284
               

               
Cow position:
               
chr21:40291708-40291500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr21:39393786-39394029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
71-320
               

               
Cow position:
               
chr21:3498532-3498780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
72-216
               

               
Cow position:
               
chr21:38440298-38440443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
72-222
               

               
Cow position:
               
chr21:32237321-32237470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
72-232
               

               
Cow position:
               
chr21:13163898-13164059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
72-268
               

               
Cow position:
               
chr21:7681138-7681330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
72-294
               

               
Cow position:
               
chr21:41040983-41041207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
72-298
               

               
Cow position:
               
chr21:13960727-13960950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
72-299
               

               
Cow position:
               
chr21:1562504-1562266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr21:28191395-28191630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr21:28792445-28792696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr21:45151590-45151328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
72-360
               

               
Cow position:
               
chr21:28027836-28028131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
73-311
               

               
Cow position:
               
chr21:14027102-14027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 233
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr21:36765782-36765535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr21:21900559-21900309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
73-327
               

               
Cow position:
               
chr21:16793829-16794083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
73-332
               

               
Cow position:
               
chr21:22005869-22005603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 208
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr21:24094719-24094454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
74-269
               

               
Cow position:
               
chr21:13717060-13716865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
74-311
               

               
Cow position:
               
chr21:10009782-10009540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 198
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr21:17433228-17432987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
74-323
               

               
Cow position:
               
chr21:22313475-22313725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
74-328
               

               
Cow position:
               
chr21:17419041-17418788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 98
               

               
Conread position:
               
75-231
               

               
Cow position:
               
chr21:17728663-17728501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
75-286
               

               
Cow position:
               
chr21:19161754-19161966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
75-298
               

               
Cow position:
               
chr21:31246306-31246534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
75-316
               

               
Cow position:
               
chr21:13674610-13674372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 194
               

               
Conread position:
               
75-329
               

               
Cow position:
               
chr21:17416250-17415996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
76-229
               

               
Cow position:
               
chr21:14015552-14015709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
76-264
               

               
Cow position:
               
chr21:6736146-6735964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
64, 136
               

               
Conread position:
               
76-298
               

               
Cow position:
               
chr21:13225758-13225980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
76-320
               

               
Cow position:
               
chr21:30938629-30938383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
77-240
               

               
Cow position:
               
chr21:13726520-13726356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr21:18341262-18341482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
47, 195
               

               
Conread position:
               
77-316
               

               
Cow position:
               
chr21:25014982-25014761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
78-201
               

               
Cow position:
               
chr21:35647783-35647659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
78-314
               

               
Cow position:
               
chr21:13757069-13757304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 197
               

               
Conread position:
               
78-323
               

               
Cow position:
               
chr21:19248940-19248699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
79-275
               

               
Cow position:
               
chr21:12222982-12222783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
80-315
               

               
Cow position:
               
chr21:8618312-8618542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
81-295
               

               
Cow position:
               
chr21:8240360-8240572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr21:13303840-13304077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr21:18721057-18720822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr21:22194051-22193812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
82-232
               

               
Cow position:
               
chr21:28824176-28824026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
82-294
               

               
Cow position:
               
chr21:8648312-8648536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
82-317
               

               
Cow position:
               
chr21:17155902-17155665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
83-232
               

               
Cow position:
               
chr21:14228230-14228079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
83-286
               

               
Cow position:
               
chr21:14360415-14360619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr21:82117-82322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
83-311
               

               
Cow position:
               
chr21:41043269-41043040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
84-217
               

               
Cow position:
               
chr21:8978500-8978632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
84-258
               

               
Cow position:
               
chr21:30243630-30243462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
84-298
               

               
Cow position:
               
chr21:3415705-3415920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
84-298
               

               
Cow position:
               
chr21:19624451-19624666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 209
               

               
Conread position:
               
84-305
               

               
Cow position:
               
chr21:17842946-17842725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
84-316
               

               
Cow position:
               
chr21:13817443-13817679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
84-316
               

               
Cow position:
               
chr21:27712192-27711952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr21:9433070-9433306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 173
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr21:700741-700505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-331
               

               
Cow position:
               
chr21:37928700-37928950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
85-294
               

               
Cow position:
               
chr21:30145576-30145374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
85-296
               

               
Cow position:
               
chr21:2537087-2536875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
85-296
               

               
Cow position:
               
chr21:24875404-24875613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 132
               

               
Conread position:
               
85-298
               

               
Cow position:
               
chr21:40820801-40820588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
86-215
               

               
Cow position:
               
chr21:8687090-8686960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
86-275
               

               
Cow position:
               
chr21:8497553-8497363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
86-298
               

               
Cow position:
               
chr21:3177894-3178108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
86-298
               

               
Cow position:
               
chr21:25012135-25012341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 94
               

               
Conread position:
               
86-315
               

               
Cow position:
               
chr21:19148163-19148394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
86-317
               

               
Cow position:
               
chr21:12541346-12541114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
86-320
               

               
Cow position:
               
chr21:35801451-35801213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
87-334
               

               
Cow position:
               
chr21:15012493-15012727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
88-232
               

               
Cow position:
               
chr21:5130313-5130168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr21:42355684-42355892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
88-298
               

               
Cow position:
               
chr21:9030036-9030255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
88-317
               

               
Cow position:
               
chr21:26033882-26034113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
89-231
               

               
Cow position:
               
chr21:265680-265822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
89-298
               

               
Cow position:
               
chr21:1735322-1735122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
89-298
               

               
Cow position:
               
chr21:38943563-38943345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
51, 167
               

               
Conread position:
               
89-311
               

               
Cow position:
               
chr21:31659091-31658879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-317
               

               
Cow position:
               
chr21:6153857-6154083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
90-298
               

               
Cow position:
               
chr21:26735466-26735660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
90-315
               

               
Cow position:
               
chr21:16895471-16895686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
90-323
               

               
Cow position:
               
chr21:13090431-13090665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 173
               

               
Conread position:
               
90-323
               

               
Cow position:
               
chr21:26391981-26392216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr21:34738635-34738830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 129
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr21:45683870-45684080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr21:17531187-17531435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
92-206
               

               
Cow position:
               
chr21:38268003-38267888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
92-222
               

               
Cow position:
               
chr21:20548301-20548165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
92-311
               

               
Cow position:
               
chr21:5405875-5406088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 124
               

               
Conread position:
               
92-320
               

               
Cow position:
               
chr21:40059087-40059302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
92-336
               

               
Cow position:
               
chr21:48482469-48482230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
93-206
               

               
Cow position:
               
chr21:19927204-19927093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
93-326
               

               
Cow position:
               
chr21:20174378-20174599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
94-213
               

               
Cow position:
               
chr21:41050950-41051069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
94-324
               

               
Cow position:
               
chr21:8959552-8959782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
94-325
               

               
Cow position:
               
chr21:21940346-21940119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
94-326
               

               
Cow position:
               
chr21:13985647-13985881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
95-298
               

               
Cow position:
               
chr21:745238-745433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
95-298
               

               
Cow position:
               
chr21:30657932-30658124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr21:14745833-14746023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
97-288
               

               
Cow position:
               
chr21:29418636-29418824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
97-298
               

               
Cow position:
               
chr21:27810454-27810655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
97-311
               

               
Cow position:
               
chr21:17911203-17910980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 217
               

               
Conread position:
               
98-258
               

               
Cow position:
               
chr21:9346487-9346649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
98-318
               

               
Cow position:
               
chr21:30977192-30976985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
98-320
               

               
Cow position:
               
chr21:12348830-12349052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
98-321
               

               
Cow position:
               
chr21:22211318-22211543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr21:38482448-38482670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
98-325
               

               
Cow position:
               
chr21:33169663-33169885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
98-326
               

               
Cow position:
               
chr21:27409667-27409449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr21:34834014-34833826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
99-295
               

               
Cow position:
               
chr21:14228836-14228635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
99-298
               

               
Cow position:
               
chr21:22525116-22524916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
99-311
               

               
Cow position:
               
chr21:21769150-21769357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
99-317
               

               
Cow position:
               
chr21:43368394-43368615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
99-325
               

               
Cow position:
               
chr21:21745935-21746163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
99-327
               

               
Cow position:
               
chr21:43316829-43316599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
100-216
               

               
Cow position:
               
chr21:43362097-43362214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
100-298
               

               
Cow position:
               
chr21:7201216-7201414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr21:35252514-35252722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
100-317
               

               
Cow position:
               
chr21:26828904-26828689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr21:14830815-14830595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
100-319
               

               
Cow position:
               
chr21:21997617-21997386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr21:20925410-20925166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
101-231
               

               
Cow position:
               
chr21:43336674-43336805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
101-312
               

               
Cow position:
               
chr21:17410281-17410078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
101-334
               

               
Cow position:
               
chr21:36280358-36280592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 207
               

               
Conread position:
               
102-232
               

               
Cow position:
               
chr21:12200169-12200302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
102-258
               

               
Cow position:
               
chr21:13043951-13043802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
102-284
               

               
Cow position:
               
chr21:17302572-17302755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
102-286
               

               
Cow position:
               
chr21:42017534-42017350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
102-298
               

               
Cow position:
               
chr21:42189688-42189497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
102-323
               

               
Cow position:
               
chr21:11743435-11743207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 202
               

               
Conread position:
               
102-341
               

               
Cow position:
               
chr21:2785417-2785195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
103-237
               

               
Cow position:
               
chr21:43265325-43265186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
103-298
               

               
Cow position:
               
chr21:790243-790044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
103-298
               

               
Cow position:
               
chr21:11006700-11006505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
103-298
               

               
Cow position:
               
chr21:11099901-11099707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
103-314
               

               
Cow position:
               
chr21:14638994-14639206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
103-314
               

               
Cow position:
               
chr21:36115673-36115885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 195
               

               
Conread position:
               
103-321
               

               
Cow position:
               
chr21:15869760-15869973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
104-214
               

               
Cow position:
               
chr21:38953500-38953612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
104-230
               

               
Cow position:
               
chr21:42131284-42131157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr21:4108846-4109040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
104-321
               

               
Cow position:
               
chr21:8986093-8986311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
104-325
               

               
Cow position:
               
chr21:646242-646026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
104-329
               

               
Cow position:
               
chr21:5214419-5214652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
104-359
               

               
Cow position:
               
chr21:21167795-21168052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
105-295
               

               
Cow position:
               
chr21:10587415-10587224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
105-296
               

               
Cow position:
               
chr21:18783397-18783205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
105-298
               

               
Cow position:
               
chr21:18578490-18578305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
105-316
               

               
Cow position:
               
chr21:45537259-45537471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
105-322
               

               
Cow position:
               
chr21:874393-874611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 204
               

               
Conread position:
               
106-213
               

               
Cow position:
               
chr21:26658909-26658801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
106-269
               

               
Cow position:
               
chr21:20107620-20107456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 121
               

               
Conread position:
               
106-311
               

               
Cow position:
               
chr21:46627325-46627515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr21:32648116-32647905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
106-328
               

               
Cow position:
               
chr21:14247208-14247430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
107-213
               

               
Cow position:
               
chr21:41994976-41994869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
107-267
               

               
Cow position:
               
chr21:12640544-12640705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
108-298
               

               
Cow position:
               
chr21:24350927-24351114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr21:27744100-27744311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
109-322
               

               
Cow position:
               
chr21:36121303-36121516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
110-328
               

               
Cow position:
               
chr21:7539451-7539236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 176
               

               
Conread position:
               
111-232
               

               
Cow position:
               
chr21:16928028-16927905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
111-232
               

               
Cow position:
               
chr21:37361164-37361041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
111-284
               

               
Cow position:
               
chr21:26454928-26454753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
111-287
               

               
Cow position:
               
chr21:8494718-8494895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
111-287
               

               
Cow position:
               
chr21:45651382-45651209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
111-298
               

               
Cow position:
               
chr21:1283810-1283990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
111-298
               

               
Cow position:
               
chr21:16796928-16797115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
5, 159
               

               
Conread position:
               
111-319
               

               
Cow position:
               
chr21:34737244-34737443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
111-328
               

               
Cow position:
               
chr21:39278219-39278000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
111-329
               

               
Cow position:
               
chr21:18561397-18561175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
112-275
               

               
Cow position:
               
chr21:9341879-9341715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr21:19826297-19826474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
112-294
               

               
Cow position:
               
chr21:30970014-30970194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
112-298
               

               
Cow position:
               
chr21:10576314-10576499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
112-298
               

               
Cow position:
               
chr21:10660814-10660628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
112-298
               

               
Cow position:
               
chr21:15305220-15305032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
112-305
               

               
Cow position:
               
chr21:10751123-10751316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
112-316
               

               
Cow position:
               
chr21:20193049-20193254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr21:9259892-9259677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 203
               

               
Conread position:
               
112-329
               

               
Cow position:
               
chr21:18449832-18450048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
113-233
               

               
Cow position:
               
chr21:30622719-30622839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr21:8506466-8506287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr21:8509354-8509175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr21:45376031-45376231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr21:22311102-22311326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
113-332
               

               
Cow position:
               
chr21:20199352-20199132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 166
               

               
Conread position:
               
115-223
               

               
Cow position:
               
chr21:25159253-25159362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
115-223
               

               
Cow position:
               
chr21:28617870-28617979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
115-237
               

               
Cow position:
               
chr21:43642619-43642741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
115-281
               

               
Cow position:
               
chr21:42343783-42343946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr21:28882263-28882446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr21:40457683-40457871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
115-315
               

               
Cow position:
               
chr21:41737990-41738188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
115-318
               

               
Cow position:
               
chr21:10624851-10624648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
115-321
               

               
Cow position:
               
chr21:19220716-19220509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 190
               

               
Conread position:
               
115-327
               

               
Cow position:
               
chr21:15200838-15201048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
115-328
               

               
Cow position:
               
chr21:13104321-13104106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
115-328
               

               
Cow position:
               
chr21:24611691-24611474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
115-329
               

               
Cow position:
               
chr21:11340467-11340677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 163
               

               
Conread position:
               
116-294
               

               
Cow position:
               
chr21:22720657-22720826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
116-305
               

               
Cow position:
               
chr21:874605-874795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
116-308
               

               
Cow position:
               
chr21:42680521-42680322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr21:1464426-1464622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
116-332
               

               
Cow position:
               
chr21:4585073-4584855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
117-223
               

               
Cow position:
               
chr21:40305027-40305135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr21:19014794-19014606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 177
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr21:40551659-40551469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr21:14595998-14596201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 188
               

               
Conread position:
               
117-327
               

               
Cow position:
               
chr21:41194071-41193861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
117-328
               

               
Cow position:
               
chr21:10138019-10138232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
118-298
               

               
Cow position:
               
chr21:8558389-8558212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
118-321
               

               
Cow position:
               
chr21:12911793-12912005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
118-321
               

               
Cow position:
               
chr21:31278268-31278475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
118-328
               

               
Cow position:
               
chr21:41437693-41437902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
118-331
               

               
Cow position:
               
chr21:24757026-24757232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
119-322
               

               
Cow position:
               
chr21:7424928-7424731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
119-325
               

               
Cow position:
               
chr21:4269030-4269223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
120-287
               

               
Cow position:
               
chr21:27567981-27568146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
120-293
               

               
Cow position:
               
chr21:44732956-44732785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
120-295
               

               
Cow position:
               
chr21:6291833-6292009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
120-298
               

               
Cow position:
               
chr21:438649-438819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
120-298
               

               
Cow position:
               
chr21:8523728-8523895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
120-308
               

               
Cow position:
               
chr21:12473969-12473789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
120-311
               

               
Cow position:
               
chr21:13134688-13134873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr21:37495859-37495658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr21:47860685-47860882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr21:3135782-3135578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
121-321
               

               
Cow position:
               
chr21:7357630-7357832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr21:9873406-9873620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
123-295
               

               
Cow position:
               
chr21:6391431-6391602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
123-296
               

               
Cow position:
               
chr21:7460697-7460866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
123-298
               

               
Cow position:
               
chr21:58540-58710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
123-298
               

               
Cow position:
               
chr21:29011880-29011713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
123-298
               

               
Cow position:
               
chr21:32272010-32272192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr21:42454951-42455181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
174, 82
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr21:40930383-40930224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
127-272
               

               
Cow position:
               
chr21:42905304-42905158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
127-287
               

               
Cow position:
               
chr21:34722903-34723063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
127-295
               

               
Cow position:
               
chr21:45446629-45446798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
129-297
               

               
Cow position:
               
chr21:10829774-10829605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
129-333
               

               
Cow position:
               
chr21:31462658-31462855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
130-309
               

               
Cow position:
               
chr21:6041881-6042062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
131-292
               

               
Cow position:
               
chr21:32536494-32536648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
132-292
               

               
Cow position:
               
chr21:3379653-3379496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
132-298
               

               
Cow position:
               
chr21:39845692-39845865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
132-332
               

               
Cow position:
               
chr21:19394784-19394583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr21:39810158-39810317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr21:16120061-16119903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr21:8359125-8358966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
136-296
               

               
Cow position:
               
chr21:22036701-22036862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
136-327
               

               
Cow position:
               
chr21:13263457-13263647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
136-334
               

               
Cow position:
               
chr21:12530148-12529950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
138-293
               

               
Cow position:
               
chr21:34727313-34727462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr21:41482869-41482710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chr21:48205115-48204950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-314
               

               
Cow position:
               
chr21:18495327-18495492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr21:21772195-21772371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
138-322
               

               
Cow position:
               
chr21:19990711-19990534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
138-325
               

               
Cow position:
               
chr21:43655808-43655993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 46
               

               
Conread position:
               
139-295
               

               
Cow position:
               
chr21:17671381-17671536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
139-316
               

               
Cow position:
               
chr21:42047935-42047759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
139-320
               

               
Cow position:
               
chr21:19176349-19176528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
140-221
               

               
Cow position:
               
chr21:19657728-19657809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
82
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-286
               

               
Cow position:
               
chr21:31258574-31258720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-298
               

               
Cow position:
               
chr21:33384393-33384236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-298
               

               
Cow position:
               
chr21:42920894-42920737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
142-320
               

               
Cow position:
               
chr21:5344988-5345167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
142-330
               

               
Cow position:
               
chr21:4008816-4008636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
143-320
               

               
Cow position:
               
chr21:19236859-19236682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
173, 7
               

               
Conread position:
               
144-273
               

               
Cow position:
               
chr21:41692162-41692291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
145-308
               

               
Cow position:
               
chr21:17856878-17857038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
145-316
               

               
Cow position:
               
chr21:19340119-19339949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
145-334
               

               
Cow position:
               
chr21:40846621-40846802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
146-285
               

               
Cow position:
               
chr21:40916597-40916731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr21:18497879-18497688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
149-328
               

               
Cow position:
               
chr21:30359228-30359057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
149-329
               

               
Cow position:
               
chr21:30794309-30794126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
150-298
               

               
Cow position:
               
chr21:8880235-8880088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
153-305
               

               
Cow position:
               
chr21:16099444-16099290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
154-298
               

               
Cow position:
               
chr21:5476701-5476845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
155-315
               

               
Cow position:
               
chr21:48242933-48242775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
158-334
               

               
Cow position:
               
chr21:7535420-7535251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
161-285
               

               
Cow position:
               
chr21:47784721-47784845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-286
               

               
Cow position:
               
chr21:42441756-42441881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-317
               

               
Cow position:
               
chr21:34209887-34209732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
164-329
               

               
Cow position:
               
chr21:40821763-40821600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 102
               

               
Conread position:
               
166-320
               

               
Cow position:
               
chr21:42227565-42227410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
147, 79
               

               
Conread position:
               
167-320
               

               
Cow position:
               
chr21:41829246-41829095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
167-323
               

               
Cow position:
               
chr21:20185383-20185530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
171-321
               

               
Cow position:
               
chr21:40593357-40593502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
175-319
               

               
Cow position:
               
chr21:12293164-12293307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 94
               

               
Conread position:
               
178-322
               

               
Cow position:
               
chr21:48609121-48609266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
178-327
               

               
Cow position:
               
chr21:5488895-5489040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
185-298
               

               
Cow position:
               
chr21:20585525-20585413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
205-322
               

               
Cow position:
               
chr21:38440606-38440721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
309-593
               

               
Cow position:
               
chr21:29254362-29254067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
310-688
               

               
Cow position:
               
chr21:4738478-4738882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
371-532
               

               
Cow position:
               
chr21:49297729-49297891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
372-688
               

               
Cow position:
               
chr21:49648067-49647722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
372-692
               

               
Cow position:
               
chr21:1686278-1685932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
6, 149
               

               
Conread position:
               
373-688
               

               
Cow position:
               
chr21:37151224-37151562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
375-597
               

               
Cow position:
               
chr21:21941644-21941413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
375-692
               

               
Cow position:
               
chr21:44293405-44293061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
376-580
               

               
Cow position:
               
chr21:33663197-33663403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
376-590
               

               
Cow position:
               
chr21:20912034-20911819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
156, 140
               

               
Conread position:
               
376-693
               

               
Cow position:
               
chr21:24886563-24886901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 136
               

               
Conread position:
               
377-689
               

               
Cow position:
               
chr21:21026407-21026733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
383-687
               

               
Cow position:
               
chr21:13299752-13300068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
211, 125
               

               
Conread position:
               
388-523
               

               
Cow position:
               
chr21:32830397-32830263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
388-532
               

               
Cow position:
               
chr21:166776-166918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
388-557
               

               
Cow position:
               
chr21:4880515-4880344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
388-559
               

               
Cow position:
               
chr21:14984886-14984713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-559
               

               
Cow position:
               
chr21:32397129-32396957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
388-579
               

               
Cow position:
               
chr21:3046254-3046450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 91
               

               
Conread position:
               
388-588
               

               
Cow position:
               
chr21:4133582-4133791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
388-590
               

               
Cow position:
               
chr21:219389-219589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
388-590
               

               
Cow position:
               
chr21:23802748-23802537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
388-590
               

               
Cow position:
               
chr21:32300029-32300238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
388-591
               

               
Cow position:
               
chr21:27262185-27262392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
388-593
               

               
Cow position:
               
chr21:4586781-4586569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
144, 124
               

               
Conread position:
               
388-593
               

               
Cow position:
               
chr21:5010552-5010340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
148, 120
               

               
Conread position:
               
388-593
               

               
Cow position:
               
chr21:15547989-15547777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 122
               

               
Conread position:
               
388-593
               

               
Cow position:
               
chr21:35576683-35576473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-593
               

               
Cow position:
               
chr21:37355053-37354846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
142, 96
               

               
Conread position:
               
388-598
               

               
Cow position:
               
chr21:3923183-3923402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
388-598
               

               
Cow position:
               
chr21:23340758-23340541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-598
               

               
Cow position:
               
chr21:34901913-34901700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-598
               

               
Cow position:
               
chr21:47976929-47977146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 120
               

               
Conread position:
               
388-601
               

               
Cow position:
               
chr21:15398054-15397834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
388-602
               

               
Cow position:
               
chr21:26240-26018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-605
               

               
Cow position:
               
chr21:4566909-4567134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
388-679
               

               
Cow position:
               
chr21:34656876-34657193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
388-688
               

               
Cow position:
               
chr21:11508858-11509183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
388-689
               

               
Cow position:
               
chr21:36977993-36977668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
100, 121
               

               
Conread position:
               
388-690
               

               
Cow position:
               
chr21:22943735-22944056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 123
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:1766605-1766274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:2513768-2514096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 118
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:3587149-3586825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
151, 75
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:4899043-4898718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 121
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:6966553-6966227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:7048263-7047937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:9364065-9363750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 209
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:11405961-11405635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:19351941-19351616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:21918416-21918736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:22463108-22463436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:24298283-24297962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:26757810-26757484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:27148632-27148306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:27620574-27620255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:28025844-28026160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
157, 87
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:30056785-30056459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:30967024-30966698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:33998601-33998277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:39428322-39428647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:39470846-39470520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-691
               

               
Cow position:
               
chr21:41796801-41796476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-693
               

               
Cow position:
               
chr21:28258592-28258917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
388-693
               

               
Cow position:
               
chr21:30857882-30858209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
388-693
               

               
Cow position:
               
chr21:36375909-36376237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
144, 120
               

               
Conread position:
               
388-693
               

               
Cow position:
               
chr21:37374146-37374458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
388-694
               

               
Cow position:
               
chr21:26634307-26633979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
388-696
               

               
Cow position:
               
chr21:2768920-2768593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
388-696
               

               
Cow position:
               
chr21:33256476-33256806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
388-696
               

               
Cow position:
               
chr21:35390224-35389901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
389-532
               

               
Cow position:
               
chr21:27286878-27287020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
389-587
               

               
Cow position:
               
chr21:995518-995322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
389-587
               

               
Cow position:
               
chr21:47943872-47944079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
389-593
               

               
Cow position:
               
chr21:17143600-17143811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-593
               

               
Cow position:
               
chr21:18284726-18284938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
389-593
               

               
Cow position:
               
chr21:24949037-24949246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
389-593
               

               
Cow position:
               
chr21:31251920-31252130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
389-602
               

               
Cow position:
               
chr21:5594649-5594872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-683
               

               
Cow position:
               
chr21:47648260-47648576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-688
               

               
Cow position:
               
chr21:44763039-44762719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
389-688
               

               
Cow position:
               
chr21:48292424-48292109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
163, 53
               

               
Conread position:
               
389-689
               

               
Cow position:
               
chr21:31513347-31513025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:3781697-3782018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:4078965-4079288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:7155312-7155638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:9895288-9895607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:13112470-13112146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:24827212-24826889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
150, 119
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:26699744-26699420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:30596167-30595845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
389-691
               

               
Cow position:
               
chr21:48274277-48273952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
389-692
               

               
Cow position:
               
chr21:48530096-48530414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
389-693
               

               
Cow position:
               
chr21:4813418-4813090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-693
               

               
Cow position:
               
chr21:10570207-10570534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 123
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr21:5020066-5020396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr21:10853187-10853515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
145, 50
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr21:21171388-21171075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr21:27066679-27066349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
144, 117
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr21:30564673-30565004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr21:33317446-33317116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
150, 117
               

               
Conread position:
               
390-591
               

               
Cow position:
               
chr21:47361247-47361039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 126
               

               
Conread position:
               
390-597
               

               
Cow position:
               
chr21:18979724-18979941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
390-688
               

               
Cow position:
               
chr21:1195461-1195781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
142, 116
               

               
Conread position:
               
390-688
               

               
Cow position:
               
chr21:22854844-22855156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 126
               

               
Conread position:
               
390-689
               

               
Cow position:
               
chr21:28916049-28915725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 116
               

               
Conread position:
               
390-691
               

               
Cow position:
               
chr21:27608775-27608455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
390-691
               

               
Cow position:
               
chr21:38026296-38026617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 126
               

               
Conread position:
               
390-691
               

               
Cow position:
               
chr21:42916715-42917039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 115
               

               
Conread position:
               
390-696
               

               
Cow position:
               
chr21:20578457-20578139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
390-696
               

               
Cow position:
               
chr21:26400843-26400514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 116
               

               
Conread position:
               
390-696
               

               
Cow position:
               
chr21:40268469-40268160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
166, 116
               

               
Conread position:
               
391-532
               

               
Cow position:
               
chr21:37123302-37123163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
391-593
               

               
Cow position:
               
chr21:2878903-2878704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
391-593
               

               
Cow position:
               
chr21:25189566-25189779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 115
               

               
Conread position:
               
391-691
               

               
Cow position:
               
chr21:2419121-2419446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
391-696
               

               
Cow position:
               
chr21:149072-149397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
141, 117
               

               
Conread position:
               
391-696
               

               
Cow position:
               
chr21:27125801-27125467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 123
               

               
Conread position:
               
392-591
               

               
Cow position:
               
chr21:25814471-25814264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
392-640
               

               
Cow position:
               
chr21:649840-649594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 120
               

               
Conread position:
               
392-682
               

               
Cow position:
               
chr21:34255666-34255346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 192
               

               
Conread position:
               
392-691
               

               
Cow position:
               
chr21:22750526-22750208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
393-691
               

               
Cow position:
               
chr21:34181173-34180852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 115
               

               
Conread position:
               
397-691
               

               
Cow position:
               
chr21:13162369-13162682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
398-691
               

               
Cow position:
               
chr21:44632-44949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
400-691
               

               
Cow position:
               
chr21:33358320-33358017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
404-598
               

               
Cow position:
               
chr21:2555665-2555464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
404-691
               

               
Cow position:
               
chr21:4097536-4097821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
410-588
               

               
Cow position:
               
chr21:17948214-17948399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
122, 98
               

               
Conread position:
               
416-690
               

               
Cow position:
               
chr21:16899239-16899536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
416-692
               

               
Cow position:
               
chr21:4733582-4733287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 92
               

               
Conread position:
               
421-687
               

               
Cow position:
               
chr21:12325034-12325322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr21:44639571-44639340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
490-693
               

               
Cow position:
               
chr21:33307004-33307218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 19
               
Show alignments to all cow chromosomes.