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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8056C10.5
        

               
Conread position:
               
3-326
               

               
Cow position:
               
chr23:41348717-41348396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 211
               

               
Conread position:
               
11-198
               

               
Cow position:
               
chr23:19769506-19769689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
13-134
               

               
Cow position:
               
chr23:1803711-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr23:38503187-38502978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 161
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr23:21309492-21309277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
13-263
               

               
Cow position:
               
chr23:39083370-39083620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr23:769633-769351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
59, 209
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr23:20194996-20194739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr23:22396528-22396260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr23:29345840-29345581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr23:799751-799464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr23:40502595-40502295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
13-314
               

               
Cow position:
               
chr23:20557925-20557625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
13-315
               

               
Cow position:
               
chr23:14523904-14524214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
13-327
               

               
Cow position:
               
chr23:20539303-20539610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
14-156
               

               
Cow position:
               
chr23:21974217-21974359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
14-173
               

               
Cow position:
               
chr23:25669168-25669010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
14-178
               

               
Cow position:
               
chr23:5745093-5745266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
14-183
               

               
Cow position:
               
chr23:1647540-1647706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chr23:18322494-18322334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
14-188
               

               
Cow position:
               
chr23:36075898-36075717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
14-189
               

               
Cow position:
               
chr23:4562807-4562981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr23:12050282-12050458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
14-199
               

               
Cow position:
               
chr23:24984246-24984064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr23:11845197-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr23:27544750-27544934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
14-201
               

               
Cow position:
               
chr23:35938262-35938453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr23:1403883-1403694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
14-208
               

               
Cow position:
               
chr23:40781247-40781444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr23:5603361-5603169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr23:9652559-9652371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr23:17000629-17000820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr23:24867227-24867425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
14-210
               

               
Cow position:
               
chr23:17404760-17404955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr23:1767751-1767948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr23:27563791-27563588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 171
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr23:1222318-1222118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr23:1876632-1876830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr23:6035357-6035549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr23:6592778-6592590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr23:19774695-19774887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr23:4966741-4966938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr23:18286113-18286312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr23:40648810-40648611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
14-214
               

               
Cow position:
               
chr23:2799503-2799700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr23:1605149-1605352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr23:31970614-31970415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr23:36128984-36128789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr23:1742278-1742480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr23:14838819-14838618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr23:6367528-6367728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr23:6995061-6994854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr23:30950878-30951084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr23:5706915-5707123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr23:20002176-20002383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr23:18698102-18697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr23:20171498-20171712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr23:11473587-11473372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr23:1254611-1254820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr23:29034238-29034450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr23:38845527-38845734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr23:4104326-4104532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr23:11380331-11380115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr23:21440080-21439862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr23:33717619-33717404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr23:38208647-38208865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr23:39780677-39780893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr23:25358654-25358852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr23:15872775-15872549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 179
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr23:35155294-35155517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr23:40891281-40891506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
14-249
               

               
Cow position:
               
chr23:5540081-5540298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
14-258
               

               
Cow position:
               
chr23:306440-306687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
14-266
               

               
Cow position:
               
chr23:20056945-20056712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
14-268
               

               
Cow position:
               
chr23:1701092-1701346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr23:18036736-18036474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
14-280
               

               
Cow position:
               
chr23:17486905-17486643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr23:9599411-9599674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr23:21452810-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
125, 201
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr23:15280577-15280305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr23:6223904-6224159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr23:349803-349529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr23:16881241-16880973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr23:283472-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr23:385391-385110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr23:7845214-7845486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr23:13555516-13555235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
193, 54
               

               
Conread position:
               
14-295
               

               
Cow position:
               
chr23:3191205-3190928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 211
               

               
Conread position:
               
14-295
               

               
Cow position:
               
chr23:5795399-5795675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:1438216-1438480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:2282253-2281986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:3967637-3967352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:10852973-10853249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:11081176-11081460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 134
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:24685173-24685442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:33570057-33570333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:34356565-34356843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:39753039-39753304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:40391398-40391677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
14-305
               

               
Cow position:
               
chr23:7175540-7175826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
14-305
               

               
Cow position:
               
chr23:22298114-22297821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
14-307
               

               
Cow position:
               
chr23:4996177-4995885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr23:7398432-7398736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
14-313
               

               
Cow position:
               
chr23:32322952-32322651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
125, 165
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr23:187099-187399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr23:3244994-3244696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 145
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr23:10416497-10416210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
14-316
               

               
Cow position:
               
chr23:11224779-11225072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr23:19221722-19221415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr23:3247506-3247813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 49
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr23:5437076-5436777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr23:18802350-18802043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
14-320
               

               
Cow position:
               
chr23:10829664-10829353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr23:8006164-8006467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr23:35239269-35239574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr23:4646432-4646728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr23:18902126-18901841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
14-323
               

               
Cow position:
               
chr23:3293613-3293916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
14-325
               

               
Cow position:
               
chr23:19173432-19173127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
192, 49
               

               
Conread position:
               
14-325
               

               
Cow position:
               
chr23:36018070-36018395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
14-326
               

               
Cow position:
               
chr23:26986350-26986042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
14-327
               

               
Cow position:
               
chr23:2501932-2501620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
14-329
               

               
Cow position:
               
chr23:307373-307691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
14-329
               

               
Cow position:
               
chr23:39813425-39813737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 25
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr23:3430990-3431320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
15-133
               

               
Cow position:
               
chr23:6720360-6720242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-188
               

               
Cow position:
               
chr23:39806789-39806964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
15-225
               

               
Cow position:
               
chr23:39275812-39276028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
15-237
               

               
Cow position:
               
chr23:11751208-11750991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr23:26632725-26632989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr23:9734337-9734623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr23:16847891-16848174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
15-298
               

               
Cow position:
               
chr23:38455259-38454961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
15-317
               

               
Cow position:
               
chr23:12363696-12363400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
15-326
               

               
Cow position:
               
chr23:16780627-16780326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 58
               

               
Conread position:
               
15-334
               

               
Cow position:
               
chr23:1655817-1656132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
16-130
               

               
Cow position:
               
chr23:1670825-1670938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
16-130
               

               
Cow position:
               
chr23:9713244-9713358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-135
               

               
Cow position:
               
chr23:23113955-23114073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
16-167
               

               
Cow position:
               
chr23:4329757-4329601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
16-168
               

               
Cow position:
               
chr23:1921302-1921152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
16-183
               

               
Cow position:
               
chr23:15710149-15709982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
16-189
               

               
Cow position:
               
chr23:3262572-3262402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
16-200
               

               
Cow position:
               
chr23:10014462-10014633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
16-201
               

               
Cow position:
               
chr23:36309344-36309528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
16-211
               

               
Cow position:
               
chr23:23409663-23409850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr23:16700115-16699922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr23:10554085-10553880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr23:40844576-40844778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr23:18296732-18296937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr23:24480036-24479832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr23:18892077-18892295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr23:1923913-1923700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr23:13599268-13599476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr23:1398111-1397900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr23:13511658-13511864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr23:13945959-13946176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr23:18402365-18402152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
16-232
               

               
Cow position:
               
chr23:21502716-21502492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
16-238
               

               
Cow position:
               
chr23:28945141-28944924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
16-258
               

               
Cow position:
               
chr23:5723468-5723699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
16-258
               

               
Cow position:
               
chr23:39573335-39573094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr23:14651781-14651536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
124, 110
               

               
Conread position:
               
16-271
               

               
Cow position:
               
chr23:7835567-7835309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
16-281
               

               
Cow position:
               
chr23:1188981-1188735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
16-286
               

               
Cow position:
               
chr23:22496643-22496368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr23:21336563-21336278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
16-291
               

               
Cow position:
               
chr23:33695849-33695568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr23:1885248-1884977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr23:41472544-41472821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr23:37065766-37066054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr23:5881595-5881322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr23:16797886-16797612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
42, 211
               

               
Conread position:
               
16-296
               

               
Cow position:
               
chr23:35149672-35149952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr23:26949123-26949393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr23:38973771-38974037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
16-304
               

               
Cow position:
               
chr23:20248772-20248485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr23:1883317-1883602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr23:14164477-14164167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr23:16631193-16631486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr23:40789901-40790173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
16-306
               

               
Cow position:
               
chr23:1636203-1636477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr23:33153266-33152983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
16-312
               

               
Cow position:
               
chr23:33628849-33629136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 201
               

               
Conread position:
               
16-315
               

               
Cow position:
               
chr23:15741439-15741148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
16-316
               

               
Cow position:
               
chr23:5162351-5162660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
16-316
               

               
Cow position:
               
chr23:38264610-38264308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
16-316
               

               
Cow position:
               
chr23:40778190-40778481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr23:534151-534445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr23:1337377-1337089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr23:14462436-14462732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr23:29242874-29243153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr23:24704205-24704502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 206
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr23:26848983-26848673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
16-319
               

               
Cow position:
               
chr23:25675776-25675474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
16-320
               

               
Cow position:
               
chr23:12091435-12091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
16-320
               

               
Cow position:
               
chr23:16246658-16246960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
16-320
               

               
Cow position:
               
chr23:18238603-18238299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
16-322
               

               
Cow position:
               
chr23:40330231-40329926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
16-323
               

               
Cow position:
               
chr23:32480110-32479792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 214
               

               
Conread position:
               
16-325
               

               
Cow position:
               
chr23:36172445-36172762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
16-326
               

               
Cow position:
               
chr23:24930149-24929839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
16-326
               

               
Cow position:
               
chr23:33711685-33711992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
16-328
               

               
Cow position:
               
chr23:11129154-11129467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 177
               

               
Conread position:
               
16-329
               

               
Cow position:
               
chr23:22804649-22804956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
16-332
               

               
Cow position:
               
chr23:1942652-1942969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr23:26794989-26794672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
16-346
               

               
Cow position:
               
chr23:34315034-34314700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
17-225
               

               
Cow position:
               
chr23:18403931-18404137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr23:4726712-4726994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
17-315
               

               
Cow position:
               
chr23:29626339-29626644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
17-320
               

               
Cow position:
               
chr23:13520375-13520666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr23:5732474-5732769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
18-201
               

               
Cow position:
               
chr23:4795098-4795277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
18-229
               

               
Cow position:
               
chr23:29069517-29069307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 193
               

               
Conread position:
               
18-246
               

               
Cow position:
               
chr23:33622227-33621997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr23:25864768-25864497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr23:22573991-22573704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr23:30827825-30827538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
285, 34
               

               
Conread position:
               
18-329
               

               
Cow position:
               
chr23:31601526-31601214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
18-329
               

               
Cow position:
               
chr23:34416489-34416802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
19-184
               

               
Cow position:
               
chr23:19371144-19370984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
19-189
               

               
Cow position:
               
chr23:25378581-25378742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr23:35247292-35247498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 193
               

               
Conread position:
               
19-311
               

               
Cow position:
               
chr23:1863398-1863675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr23:40348716-40348450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr23:5617505-5617777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr23:15743019-15743293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr23:3522678-3522968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
20-331
               

               
Cow position:
               
chr23:18749138-18748845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
121, 158
               

               
Conread position:
               
21-266
               

               
Cow position:
               
chr23:1917382-1917135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr23:39302630-39302899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr23:10085255-10084950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr23:8911393-8911579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
22-282
               

               
Cow position:
               
chr23:3279528-3279283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr23:18649770-18650043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
22-286
               

               
Cow position:
               
chr23:24701161-24700886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
22-293
               

               
Cow position:
               
chr23:38744003-38744267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
22-316
               

               
Cow position:
               
chr23:8837764-8837469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 248
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr23:36244275-36244583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
23-223
               

               
Cow position:
               
chr23:7574704-7574495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
23-305
               

               
Cow position:
               
chr23:20744663-20744373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
24-317
               

               
Cow position:
               
chr23:18384653-18384941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr23:1589520-1589719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
30-316
               

               
Cow position:
               
chr23:39049499-39049223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
31-189
               

               
Cow position:
               
chr23:3909948-3909790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
31-221
               

               
Cow position:
               
chr23:20388711-20388526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 8
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr23:24926750-24927028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr23:40275606-40275355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
31-312
               

               
Cow position:
               
chr23:18822931-18823200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr23:4528940-4528636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
32-144
               

               
Cow position:
               
chr23:39520510-39520398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
32-191
               

               
Cow position:
               
chr23:1499548-1499391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
32-196
               

               
Cow position:
               
chr23:4470562-4470397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr23:19765295-19765485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr23:10876335-10876539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr23:29107133-29106936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
32-236
               

               
Cow position:
               
chr23:35503724-35503916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 9
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr23:39775664-39775887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr23:21446059-21446286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr23:18416107-18415867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
32-287
               

               
Cow position:
               
chr23:22415005-22415261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 125
               

               
Conread position:
               
32-290
               

               
Cow position:
               
chr23:16582969-16582713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
32-292
               

               
Cow position:
               
chr23:40637195-40637460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr23:37897851-37898115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr23:9226214-9226476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr23:40443797-40444058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 172
               

               
Conread position:
               
32-315
               

               
Cow position:
               
chr23:33601588-33601316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
201, 44
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr23:22414367-22414088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
32-326
               

               
Cow position:
               
chr23:19268988-19269276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr23:4968581-4968293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr23:5436705-5436407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
32-332
               

               
Cow position:
               
chr23:1743741-1744024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
32-347
               

               
Cow position:
               
chr23:15287198-15286899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
33-230
               

               
Cow position:
               
chr23:3814342-3814142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
34-213
               

               
Cow position:
               
chr23:13202420-13202239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
34-214
               

               
Cow position:
               
chr23:3830259-3830080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
34-218
               

               
Cow position:
               
chr23:349009-348823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr23:8917733-8917547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr23:35369104-35368906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
34-293
               

               
Cow position:
               
chr23:39330348-39330097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
34-294
               

               
Cow position:
               
chr23:19565390-19565644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
34-295
               

               
Cow position:
               
chr23:3282182-3281911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr23:16961237-16961488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 180
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr23:35965084-35965351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr23:39778340-39778599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
21, 184
               

               
Conread position:
               
34-307
               

               
Cow position:
               
chr23:32166961-32167242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
34-315
               

               
Cow position:
               
chr23:12470870-12471150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
34-317
               

               
Cow position:
               
chr23:39524619-39524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr23:1614717-1614426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
34-327
               

               
Cow position:
               
chr23:19760847-19760552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr23:1290235-1290539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
35-209
               

               
Cow position:
               
chr23:22674499-22674306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
35-213
               

               
Cow position:
               
chr23:22105503-22105680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
35-294
               

               
Cow position:
               
chr23:20604777-20604489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
36-230
               

               
Cow position:
               
chr23:4916628-4916827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
36-325
               

               
Cow position:
               
chr23:11212449-11212734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 180
               

               
Conread position:
               
36-327
               

               
Cow position:
               
chr23:24966521-24966229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
38-209
               

               
Cow position:
               
chr23:11045431-11045602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 100
               

               
Conread position:
               
38-314
               

               
Cow position:
               
chr23:5426376-5426655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
38-319
               

               
Cow position:
               
chr23:40995117-40995383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
39-188
               

               
Cow position:
               
chr23:32309631-32309780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
39-223
               

               
Cow position:
               
chr23:3244520-3244339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
39-286
               

               
Cow position:
               
chr23:39811414-39811168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
39-293
               

               
Cow position:
               
chr23:4877303-4877568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
39-319
               

               
Cow position:
               
chr23:16447745-16447471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
40-232
               

               
Cow position:
               
chr23:360743-360549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
40-343
               

               
Cow position:
               
chr23:14140554-14140864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr23:17484890-17484666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
41-298
               

               
Cow position:
               
chr23:1427036-1426781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr23:19758680-19758423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr23:39793627-39793803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
42-258
               

               
Cow position:
               
chr23:26283673-26283891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
44-223
               

               
Cow position:
               
chr23:17676008-17676186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr23:14739395-14739587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
44-275
               

               
Cow position:
               
chr23:24944699-24944464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
44-280
               

               
Cow position:
               
chr23:29021617-29021851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 152
               

               
Conread position:
               
44-286
               

               
Cow position:
               
chr23:2160684-2160452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
44-295
               

               
Cow position:
               
chr23:28529996-28529752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
186, 13
               

               
Conread position:
               
44-298
               

               
Cow position:
               
chr23:12334159-12334424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
44-305
               

               
Cow position:
               
chr23:7956899-7956642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
44-322
               

               
Cow position:
               
chr23:2470947-2471231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
45-198
               

               
Cow position:
               
chr23:33940208-33940052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
45-294
               

               
Cow position:
               
chr23:38732199-38732429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
46-210
               

               
Cow position:
               
chr23:2405852-2406018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
46-273
               

               
Cow position:
               
chr23:6767856-6768086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
47-298
               

               
Cow position:
               
chr23:37976-38232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
47-298
               

               
Cow position:
               
chr23:36200367-36200601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
47-329
               

               
Cow position:
               
chr23:5311286-5311573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr23:4972720-4972938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-287
               

               
Cow position:
               
chr23:1536274-1536511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr23:4003595-4003887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
49-288
               

               
Cow position:
               
chr23:20093287-20093052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
49-311
               

               
Cow position:
               
chr23:3890612-3890356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr23:30244495-30244757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
51-275
               

               
Cow position:
               
chr23:37171732-37171509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
51-296
               

               
Cow position:
               
chr23:1759205-1759447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
51-298
               

               
Cow position:
               
chr23:29786382-29786141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
52-206
               

               
Cow position:
               
chr23:30655852-30655701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
52-322
               

               
Cow position:
               
chr23:13674073-13673789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
53-174
               

               
Cow position:
               
chr23:21545452-21545575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr23:25990479-25990236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 192
               

               
Conread position:
               
55-314
               

               
Cow position:
               
chr23:12590357-12590619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
55-314
               

               
Cow position:
               
chr23:14394628-14394887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
248, 51
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr23:28590338-28590075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 193
               

               
Conread position:
               
56-302
               

               
Cow position:
               
chr23:13254154-13254404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 218
               

               
Conread position:
               
57-242
               

               
Cow position:
               
chr23:7554565-7554372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
61-231
               

               
Cow position:
               
chr23:17231116-17231282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
62-201
               

               
Cow position:
               
chr23:27529115-27528976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr23:6244626-6244401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
62-319
               

               
Cow position:
               
chr23:8698388-8698651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
63-217
               

               
Cow position:
               
chr23:18037279-18037428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
63-221
               

               
Cow position:
               
chr23:32411882-32412045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
63-223
               

               
Cow position:
               
chr23:6158229-6158068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
63-281
               

               
Cow position:
               
chr23:468497-468279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 186
               

               
Conread position:
               
63-326
               

               
Cow position:
               
chr23:37041618-37041356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
64-201
               

               
Cow position:
               
chr23:8063513-8063651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
64-223
               

               
Cow position:
               
chr23:5605743-5605905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr23:28528044-28528265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
64-298
               

               
Cow position:
               
chr23:32173890-32173657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
64-305
               

               
Cow position:
               
chr23:36267987-36268228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 155
               

               
Conread position:
               
64-309
               

               
Cow position:
               
chr23:16037563-16037315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 236
               

               
Conread position:
               
64-311
               

               
Cow position:
               
chr23:27859755-27860007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
64-316
               

               
Cow position:
               
chr23:5703871-5704118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
64-323
               

               
Cow position:
               
chr23:7392333-7392072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
65-294
               

               
Cow position:
               
chr23:16744521-16744741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
65-331
               

               
Cow position:
               
chr23:28502259-28502522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 201
               

               
Conread position:
               
65-338
               

               
Cow position:
               
chr23:29521443-29521718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
67-212
               

               
Cow position:
               
chr23:4864404-4864550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
67-232
               

               
Cow position:
               
chr23:18605434-18605270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
67-298
               

               
Cow position:
               
chr23:24509667-24509886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr23:1725326-1725560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
67-317
               

               
Cow position:
               
chr23:30012300-30012048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
68-183
               

               
Cow position:
               
chr23:25371801-25371916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
68-213
               

               
Cow position:
               
chr23:29459125-29458979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
68-217
               

               
Cow position:
               
chr23:23904354-23904203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
68-243
               

               
Cow position:
               
chr23:29479862-29480036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
68-286
               

               
Cow position:
               
chr23:6501684-6501465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
68-286
               

               
Cow position:
               
chr23:22586854-22587068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
68-296
               

               
Cow position:
               
chr23:40095160-40095382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr23:1585427-1585197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr23:1981685-1981471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr23:13137962-13137737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
68-306
               

               
Cow position:
               
chr23:9874629-9874870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
68-311
               

               
Cow position:
               
chr23:25556851-25557094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
68-313
               

               
Cow position:
               
chr23:21407800-21407553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 180
               

               
Conread position:
               
68-317
               

               
Cow position:
               
chr23:25363545-25363795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
68-319
               

               
Cow position:
               
chr23:1103216-1103466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 128
               

               
Conread position:
               
68-322
               

               
Cow position:
               
chr23:11770961-11771204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr23:39339968-39340232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
68-326
               

               
Cow position:
               
chr23:10377382-10377121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr23:2316761-2317013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 150
               

               
Conread position:
               
68-331
               

               
Cow position:
               
chr23:2984749-2985013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
69, 136
               

               
Conread position:
               
69-191
               

               
Cow position:
               
chr23:28053244-28053369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr23:1936668-1936508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-228
               

               
Cow position:
               
chr23:12645305-12645147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
69-228
               

               
Cow position:
               
chr23:12646331-12646173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
69-244
               

               
Cow position:
               
chr23:13471140-13470965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
69-264
               

               
Cow position:
               
chr23:20563672-20563865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
69-266
               

               
Cow position:
               
chr23:7696533-7696716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
69-282
               

               
Cow position:
               
chr23:5785819-5786031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr23:3234807-3234587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr23:1760871-1760631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr23:9805776-9805561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr23:31262864-31263103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr23:40542290-40542057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr23:4903865-4904112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr23:7311796-7312055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 205
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr23:8293476-8293739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
71, 241
               

               
Conread position:
               
69-329
               

               
Cow position:
               
chr23:57189-56924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 238
               

               
Conread position:
               
69-330
               

               
Cow position:
               
chr23:28206572-28206833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 193
               

               
Conread position:
               
69-345
               

               
Cow position:
               
chr23:30585675-30585401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
70-231
               

               
Cow position:
               
chr23:4336046-4336204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
70-284
               

               
Cow position:
               
chr23:2358856-2359064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 146
               

               
Conread position:
               
70-286
               

               
Cow position:
               
chr23:30311956-30311740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 140
               

               
Conread position:
               
70-298
               

               
Cow position:
               
chr23:18692202-18691972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr23:15360790-15360535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chr23:15866810-15866541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
71-211
               

               
Cow position:
               
chr23:21384941-21384802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr23:7709767-7709999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 121
               

               
Conread position:
               
71-334
               

               
Cow position:
               
chr23:39203091-39202834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
72-214
               

               
Cow position:
               
chr23:4054195-4054337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
72-220
               

               
Cow position:
               
chr23:20435087-20434937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
72-293
               

               
Cow position:
               
chr23:8923580-8923796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
72-301
               

               
Cow position:
               
chr23:16690090-16689860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
72-305
               

               
Cow position:
               
chr23:26741513-26741281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 197
               

               
Conread position:
               
72-305
               

               
Cow position:
               
chr23:31988029-31988251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr23:37205882-37205642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr23:2179680-2179432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
72-333
               

               
Cow position:
               
chr23:4844584-4844845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
72-349
               

               
Cow position:
               
chr23:5870214-5869938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
73-292
               

               
Cow position:
               
chr23:39267763-39267981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr23:26779696-26779476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr23:35929929-35930146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr23:22238843-22238618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 196
               

               
Conread position:
               
73-323
               

               
Cow position:
               
chr23:21788788-21788546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
73-329
               

               
Cow position:
               
chr23:24962978-24963236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
74-232
               

               
Cow position:
               
chr23:21438473-21438634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
74-233
               

               
Cow position:
               
chr23:7596367-7596214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr23:14895694-14895458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr23:25676641-25676388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
75-212
               

               
Cow position:
               
chr23:14569520-14569382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
75-220
               

               
Cow position:
               
chr23:25938406-25938263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
75-292
               

               
Cow position:
               
chr23:3835614-3835385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
75-298
               

               
Cow position:
               
chr23:9220388-9220607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
76-298
               

               
Cow position:
               
chr23:35656394-35656611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
76-335
               

               
Cow position:
               
chr23:40673002-40672737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
77-188
               

               
Cow position:
               
chr23:1803925-1803815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr23:37118727-37118582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
78-232
               

               
Cow position:
               
chr23:4241654-4241503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
78-232
               

               
Cow position:
               
chr23:27790001-27790158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr23:4327717-4327498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
78-292
               

               
Cow position:
               
chr23:5799477-5799275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
78-305
               

               
Cow position:
               
chr23:39333539-39333310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
78-316
               

               
Cow position:
               
chr23:18739481-18739243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 224
               

               
Conread position:
               
79-275
               

               
Cow position:
               
chr23:40501113-40500918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 150
               

               
Conread position:
               
79-298
               

               
Cow position:
               
chr23:40950973-40951205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
79-320
               

               
Cow position:
               
chr23:38267413-38267181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
80-294
               

               
Cow position:
               
chr23:17597412-17597620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
80-295
               

               
Cow position:
               
chr23:1877910-1877698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 147
               

               
Conread position:
               
80-295
               

               
Cow position:
               
chr23:10497685-10497895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
81-232
               

               
Cow position:
               
chr23:18787297-18787147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
81-275
               

               
Cow position:
               
chr23:89985-89788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
81-318
               

               
Cow position:
               
chr23:1194505-1194273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
81-322
               

               
Cow position:
               
chr23:4090414-4090645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
81-326
               

               
Cow position:
               
chr23:1652988-1653233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
82-213
               

               
Cow position:
               
chr23:3104873-3105004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
82-318
               

               
Cow position:
               
chr23:37660659-37660891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
83-323
               

               
Cow position:
               
chr23:5686633-5686409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
83-335
               

               
Cow position:
               
chr23:344198-343936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
84-231
               

               
Cow position:
               
chr23:33554295-33554150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
84-286
               

               
Cow position:
               
chr23:14350815-14351015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
84-286
               

               
Cow position:
               
chr23:33153774-33153976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
84-293
               

               
Cow position:
               
chr23:22668515-22668315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr23:39839409-39839644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-320
               

               
Cow position:
               
chr23:15655674-15655432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 227
               

               
Conread position:
               
84-320
               

               
Cow position:
               
chr23:28574699-28574930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
125, 55
               

               
Conread position:
               
84-329
               

               
Cow position:
               
chr23:12290256-12290509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
85-217
               

               
Cow position:
               
chr23:5532968-5532833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
85-298
               

               
Cow position:
               
chr23:15954302-15954096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr23:32621274-32621520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 230
               

               
Conread position:
               
86-298
               

               
Cow position:
               
chr23:5395484-5395281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
86-329
               

               
Cow position:
               
chr23:40738027-40737778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
86-330
               

               
Cow position:
               
chr23:24779551-24779298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
87-286
               

               
Cow position:
               
chr23:40847561-40847761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
89-292
               

               
Cow position:
               
chr23:21423762-21423962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
89-298
               

               
Cow position:
               
chr23:1661624-1661432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
89-326
               

               
Cow position:
               
chr23:12405825-12405593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
90-209
               

               
Cow position:
               
chr23:40122557-40122677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
90-314
               

               
Cow position:
               
chr23:6672639-6672411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
90-345
               

               
Cow position:
               
chr23:27848992-27849240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
93-298
               

               
Cow position:
               
chr23:19453985-19453770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
93-298
               

               
Cow position:
               
chr23:30867300-30867097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
94-229
               

               
Cow position:
               
chr23:32546265-32546137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
94-275
               

               
Cow position:
               
chr23:39368337-39368518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-292
               

               
Cow position:
               
chr23:204280-204486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
94-298
               

               
Cow position:
               
chr23:1739468-1739659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
94-298
               

               
Cow position:
               
chr23:5314527-5314730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
94-298
               

               
Cow position:
               
chr23:37948687-37948891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
94-335
               

               
Cow position:
               
chr23:3204778-3205029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
95-298
               

               
Cow position:
               
chr23:7471557-7471746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
95-305
               

               
Cow position:
               
chr23:35512263-35512048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
95-320
               

               
Cow position:
               
chr23:40137565-40137778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 20
               
UCSC Genome Browser

               
Conread position:
               
96-315
               

               
Cow position:
               
chr23:1954281-1954493 (view  custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 110
               
UCSC Genome Browser

               
               
               
Conread position:
97-216

               
               
               
Cow position:
chr23:25726201-25726320 (view  custom track)

               
               
               
Alignm length:
121

               
               
               
Alignm identity:
100

               
               
               
Alignm E-value:
1e-26

               
               
               
Alignm gaps (pig, cow):
43, 109
UCSC Genome Browser

               
               
               
Conread position:
97-287

               
               
               
Cow position:
chr23:5927613-5927431 (view  custom track)

               
               
               
Alignm length:
192

               
               
               
Alignm identity:
137

               
               
               
Alignm E-value:
1e-22

               
               
               
Alignm gaps (pig, cow):
44, 57

               
               
               Conread position:97-322
               
               
               Cow position:chr23:1798113-1798340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:177
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:97-322
               
               
               Cow position:chr23:26604253-26604483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:160
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:98-295
               
               
               Cow position:chr23:16664398-16664204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):46, 129

               
               
               Conread position:98-296
               
               
               Cow position:chr23:32126308-32126505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):36, 59

               
               
               Conread position:98-309
               
               
               Cow position:chr23:38854586-38854375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:153
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):46, 108

               
               
               Conread position:98-314
               
               
               Cow position:chr23:29041161-29040942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:98-319
               
               
               Cow position:chr23:24809434-24809213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):51, 92

               
               
               Conread position:99-223
               
               
               Cow position:chr23:5203927-5203803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:101
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):41, 74

               
               
               Conread position:99-229
               
               
               Cow position:chr23:18106966-18106836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):17, 98

               
               
               Conread position:99-232
               
               
               Cow position:chr23:19273659-19273788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:105
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):128, 33

               
               
               Conread position:99-294
               
               
               Cow position:chr23:38993086-38992898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):13, 71

               
               
               Conread position:99-298
               
               
               Cow position:chr23:250222-250028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):42, 17

               
               
               Conread position:99-302
               
               
               Cow position:chr23:809510-809713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:161
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):44, 120

               
               
               Conread position:99-311
               
               
               Cow position:chr23:587684-587899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):42, 202

               
               
               Conread position:99-321
               
               
               Cow position:chr23:7155688-7155477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):42, 70

               
               
               Conread position:99-346
               
               
               Cow position:chr23:33434665-33434911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):39, 179

               
               
               Conread position:100-229
               
               
               Cow position:chr23:31299181-31299310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:101
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):40, 13

               
               
               Conread position:100-289
               
               
               Cow position:chr23:14580755-14580933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):40, 95

               
               
               Conread position:100-298
               
               
               Cow position:chr23:10888280-10888470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:151
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):39, 84

               
               
               Conread position:100-320
               
               
               Cow position:chr23:39108938-39109161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:160
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):41, 96

               
               
               Conread position:100-321
               
               
               Cow position:chr23:3952008-3952226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):40, 161

               
               
               Conread position:100-329
               
               
               Cow position:chr23:39864658-39864891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):40, 62

               
               
               Conread position:100-347
               
               
               Cow position:chr23:5514530-5514765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):40, 119

               
               
               Conread position:101-334
               
               
               Cow position:chr23:35527087-35527320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:172
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):195, 176

               
               
               Conread position:102-295
               
               
               Cow position:chr23:22530431-22530238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):40, 136

               
               
               Conread position:102-298
               
               
               Cow position:chr23:20397456-20397265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:102-305
               
               
               Cow position:chr23:18222049-18221845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:102-312
               
               
               Cow position:chr23:4042471-4042665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:102-318
               
               
               Cow position:chr23:33934484-33934271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):38, 49

               
               
               Conread position:102-320
               
               
               Cow position:chr23:19179368-19179147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):32, 167

               
               
               Conread position:102-324
               
               
               Cow position:chr23:4343489-4343713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:102-327
               
               
               Cow position:chr23:17012731-17012511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):38, 118

               
               
               Conread position:102-340
               
               
               Cow position:chr23:27027082-27026852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:177
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):40, 46

               
               
               Conread position:103-232
               
               
               Cow position:chr23:23114067-23114197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:101
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:103-298
               
               
               Cow position:chr23:39248379-39248198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:150
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):37, 82

               
               
               Conread position:103-317
               
               
               Cow position:chr23:30357290-30357077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):38, 152

               
               
               Conread position:103-336
               
               
               Cow position:chr23:23897201-23897436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:105-232
               
               
               Cow position:chr23:17590812-17590940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:101
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):35, 95

               
               
               Conread position:105-294
               
               
               Cow position:chr23:665777-665582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:136
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):17, 87

               
               
               Conread position:105-295
               
               
               Cow position:chr23:22826430-22826254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):35, 101

               
               
               Conread position:105-298
               
               
               Cow position:chr23:6179535-6179346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):36, 95

               
               
               Conread position:105-332
               
               
               Cow position:chr23:11053881-11053656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):39, 21

               
               
               Conread position:106-197
               
               
               Cow position:chr23:5316658-5316566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:93
               
               
               Alignm identity:81
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:106-252
               
               
               Cow position:chr23:3979751-3979603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:127
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:106-292
               
               
               Cow position:chr23:18874403-18874206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:150
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):33, 87

               
               
               Conread position:106-294
               
               
               Cow position:chr23:16647334-16647523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:140
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:106-298
               
               
               Cow position:chr23:3896012-3895819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:106-320
               
               
               Cow position:chr23:7856771-7856987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:107-232
               
               
               Cow position:chr23:33360887-33360763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:102
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):98, 26

               
               
               Conread position:107-287
               
               
               Cow position:chr23:10844575-10844750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):99, 26

               
               
               Conread position:107-295
               
               
               Cow position:chr23:26029162-26029357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):32, 143

               
               
               Conread position:107-314
               
               
               Cow position:chr23:29330320-29330526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:151
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):33, 197

               
               
               Conread position:107-326
               
               
               Cow position:chr23:33232689-33232472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:166
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):33, 92

               
               
               Conread position:107-334
               
               
               Cow position:chr23:37456024-37455799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):33, 97

               
               
               Conread position:110-223
               
               
               Cow position:chr23:580805-580690 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:92
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:110-323
               
               
               Cow position:chr23:17281984-17282189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):186, 10

               
               
               Conread position:111-210
               
               
               Cow position:chr23:26286642-26286544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:101
               
               
               Alignm identity:88
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):29, 67

               
               
               Conread position:111-229
               
               
               Cow position:chr23:1503588-1503705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:96
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):29, 100

               
               
               Conread position:111-231
               
               
               Cow position:chr23:26694166-26694043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:100
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:111-311
               
               
               Cow position:chr23:18611749-18611548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:157
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):5, 180

               
               
               Conread position:111-315
               
               
               Cow position:chr23:41108004-41107801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:147
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):30, 100

               
               
               Conread position:111-322
               
               
               Cow position:chr23:39254728-39254517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):30, 194

               
               
               Conread position:112-223
               
               
               Cow position:chr23:5174558-5174670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:113
               
               
               Alignm identity:90
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:112-235
               
               
               Cow position:chr23:3484290-3484412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):28, 67

               
               
               Conread position:112-252
               
               
               Cow position:chr23:7247094-7246953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:111
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):29, 102

               
               
               Conread position:112-287
               
               
               Cow position:chr23:15288331-15288507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:112-294
               
               
               Cow position:chr23:37207215-37207035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):29, 96

               
               
               Conread position:112-298
               
               
               Cow position:chr23:1480657-1480844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:148
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:112-317
               
               
               Cow position:chr23:12040177-12040382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:146
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:112-328
               
               
               Cow position:chr23:13553680-13553900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:112-329
               
               
               Cow position:chr23:38710567-38710790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:151
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):28, 99

               
               
               Conread position:112-336
               
               
               Cow position:chr23:16709895-16709674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:162
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):27, 73

               
               
               Conread position:113-316
               
               
               Cow position:chr23:19515454-19515256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:140
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):32, 58

               
               
               Conread position:113-319
               
               
               Cow position:chr23:24718783-24718582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):26, 114

               
               
               Conread position:113-323
               
               
               Cow position:chr23:21664323-21664528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):27, 99

               
               
               Conread position:114-268
               
               
               Cow position:chr23:38994253-38994409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:114-298
               
               
               Cow position:chr23:12138029-12138210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):27, 92

               
               
               Conread position:114-298
               
               
               Cow position:chr23:40511300-40511485 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:114-299
               
               
               Cow position:chr23:25699747-25699930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):11, 58

               
               
               Conread position:115-212
               
               
               Cow position:chr23:35254145-35254047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:99
               
               
               Alignm identity:87
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:115-232
               
               
               Cow position:chr23:30109866-30109983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:95
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):24, 48

               
               
               Conread position:115-246
               
               
               Cow position:chr23:10595440-10595309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:102
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):25, 109

               
               
               Conread position:115-258
               
               
               Cow position:chr23:18417113-18417247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):25, 97

               
               
               Conread position:115-286
               
               
               Cow position:chr23:13692824-13692992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:115-286
               
               
               Cow position:chr23:30170766-30170603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):26, 47

               
               
               Conread position:115-292
               
               
               Cow position:chr23:27633686-27633509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):17, 125

               
               
               Conread position:115-295
               
               
               Cow position:chr23:16073543-16073728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):98, 17

               
               
               Conread position:115-298
               
               
               Cow position:chr23:4979261-4979081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):26, 37

               
               
               Conread position:115-298
               
               
               Cow position:chr23:11369249-11369422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:115-305
               
               
               Cow position:chr23:20596574-20596380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:148
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):24, 92

               
               
               Conread position:115-317
               
               
               Cow position:chr23:26591890-26591672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):25, 34

               
               
               Conread position:115-318
               
               
               Cow position:chr23:36458136-36457932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):25, 81

               
               
               Conread position:115-319
               
               
               Cow position:chr23:30617458-30617251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:166
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:115-320
               
               
               Cow position:chr23:25883987-25884190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):26, 50

               
               
               Conread position:115-327
               
               
               Cow position:chr23:18489677-18489883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:115-330
               
               
               Cow position:chr23:39125406-39125189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):25, 33

               
               
               Conread position:115-331
               
               
               Cow position:chr23:21628181-21628403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:161
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:116-298
               
               
               Cow position:chr23:28814397-28814581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:117-221
               
               
               Cow position:chr23:33569245-33569142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:105
               
               
               Alignm identity:85
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:117-295
               
               
               Cow position:chr23:11250713-11250890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):24, 96

               
               
               Conread position:117-298
               
               
               Cow position:chr23:10815932-10815755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:139
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):24, 83

               
               
               Conread position:117-298
               
               
               Cow position:chr23:36306591-36306768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):24, 144

               
               
               Conread position:117-322
               
               
               Cow position:chr23:2395575-2395372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:149
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):24, 95

               
               
               Conread position:118-287
               
               
               Cow position:chr23:26127038-26126865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:118-298
               
               
               Cow position:chr23:23104463-23104288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:141
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):23, 15

               
               
               Conread position:118-316
               
               
               Cow position:chr23:10675875-10676075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:118-317
               
               
               Cow position:chr23:4282192-4281989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):23, 78

               
               
               Conread position:118-317
               
               
               Cow position:chr23:27414068-27413871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):23, 74

               
               
               Conread position:118-319
               
               
               Cow position:chr23:13553678-13553480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:157
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):23, 126

               
               
               Conread position:118-321
               
               
               Cow position:chr23:4291379-4291580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:161
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):22, 7

               
               
               Conread position:118-323
               
               
               Cow position:chr23:1510903-1510699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:151
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):20, 110

               
               
               Conread position:118-329
               
               
               Cow position:chr23:4416264-4416052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:167
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:119-292
               
               
               Cow position:chr23:20259184-20259016 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:119-298
               
               
               Cow position:chr23:13380734-13380911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):21, 149

               
               
               Conread position:119-314
               
               
               Cow position:chr23:17462614-17462810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:148
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:119-320
               
               
               Cow position:chr23:9876974-9876776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):26, 101

               
               
               Conread position:119-325
               
               
               Cow position:chr23:1490386-1490582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):20, 13

               
               
               Conread position:119-329
               
               
               Cow position:chr23:28580562-28580348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:164
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:119-336
               
               
               Cow position:chr23:26100349-26100135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):25, 182

               
               
               Conread position:120-305
               
               
               Cow position:chr23:19182481-19182295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:120-323
               
               
               Cow position:chr23:39056783-39056984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:158
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):20, 8

               
               
               Conread position:121-312
               
               
               Cow position:chr23:29972413-29972615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:121-315
               
               
               Cow position:chr23:4793213-4793017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:121-318
               
               
               Cow position:chr23:5320906-5320703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:122-231
               
               
               Cow position:chr23:5387063-5386956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:94
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):18, 43

               
               
               Conread position:122-237
               
               
               Cow position:chr23:38117985-38118101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:101
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:122-321
               
               
               Cow position:chr23:25087375-25087183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):18, 144

               
               
               Conread position:122-324
               
               
               Cow position:chr23:5451346-5451547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):19, 81

               
               
               Conread position:123-295
               
               
               Cow position:chr23:13410727-13410562 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):17, 52

               
               
               Conread position:123-295
               
               
               Cow position:chr23:20272099-20271933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:123-298
               
               
               Cow position:chr23:9387999-9387828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):17, 42

               
               
               Conread position:123-317
               
               
               Cow position:chr23:4802987-4803184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):17, 92

               
               
               Conread position:124-298
               
               
               Cow position:chr23:11277071-11276902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:126
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):16, 72

               
               
               Conread position:124-320
               
               
               Cow position:chr23:17792395-17792202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):16, 78

               
               
               Conread position:124-329
               
               
               Cow position:chr23:3297893-3298093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):192, 56

               
               
               Conread position:125-286
               
               
               Cow position:chr23:2288791-2288942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:125-294
               
               
               Cow position:chr23:164789-164952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):6, 130

               
               
               Conread position:125-298
               
               
               Cow position:chr23:18740187-18740013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:125-320
               
               
               Cow position:chr23:5642330-5642137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):15, 42

               
               
               Conread position:125-321
               
               
               Cow position:chr23:28868491-28868298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):19, 179

               
               
               Conread position:126-284
               
               
               Cow position:chr23:35718344-35718501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):14, 6

               
               
               Conread position:126-286
               
               
               Cow position:chr23:36022757-36022602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):16, 101

               
               
               Conread position:126-310
               
               
               Cow position:chr23:33702363-33702178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):80, 172

               
               
               Conread position:126-316
               
               
               Cow position:chr23:15056540-15056359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):15, 89

               
               
               Conread position:127-299
               
               
               Cow position:chr23:20725655-20725488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):17, 79

               
               
               Conread position:127-324
               
               
               Cow position:chr23:15099897-15099697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:128-298
               
               
               Cow position:chr23:9726508-9726337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:128-311
               
               
               Cow position:chr23:2110816-2110993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):12, 34

               
               
               Conread position:128-330
               
               
               Cow position:chr23:29607110-29607308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):12, 34

               
               
               Conread position:129-315
               
               
               Cow position:chr23:5215882-5215694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):12, 41

               
               
               Conread position:131-297
               
               
               Cow position:chr23:3983155-3982989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):7, 86

               
               
               Conread position:132-294
               
               
               Cow position:chr23:5603708-5603549 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):9, 74

               
               
               Conread position:133-306
               
               
               Cow position:chr23:25933196-25933358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):10, 83

               
               
               Conread position:133-319
               
               
               Cow position:chr23:1061791-1061969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):7, 70

               
               
               Conread position:133-332
               
               
               Cow position:chr23:18387552-18387351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:141
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:133-334
               
               
               Cow position:chr23:40965943-40965742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):8, 164

               
               
               Conread position:134-314
               
               
               Cow position:chr23:22205551-22205381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):6, 62

               
               
               Conread position:134-315
               
               
               Cow position:chr23:19739526-19739344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):6, 165

               
               
               Conread position:134-347
               
               
               Cow position:chr23:30962840-30963055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:135-298
               
               
               Cow position:chr23:34264710-34264550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:136-322
               
               
               Cow position:chr23:13836762-13836949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):75, 169

               
               
               Conread position:136-329
               
               
               Cow position:chr23:27526627-27526819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:142
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:136-334
               
               
               Cow position:chr23:4338304-4338112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):44, 82

               
               
               Conread position:138-281
               
               
               Cow position:chr23:22324244-22324107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:118
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:138-298
               
               
               Cow position:chr23:4521840-4521679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:138-298
               
               
               Cow position:chr23:5605303-5605467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:138-298
               
               
               Cow position:chr23:5612563-5612727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:139-298
               
               
               Cow position:chr23:21473206-21473050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:139-329
               
               
               Cow position:chr23:9754168-9753977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):164, 0

               
               
               Conread position:139-335
               
               
               Cow position:chr23:40487919-40487724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):183, 19

               
               
               Conread position:141-293
               
               
               Cow position:chr23:37993219-37993373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:117
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:142-265
               
               
               Cow position:chr23:36307665-36307544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:142-335
               
               
               Cow position:chr23:4073047-4072855 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):168, 0

               
               
               Conread position:143-295
               
               
               Cow position:chr23:3270348-3270498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):122, 0

               
               
               Conread position:145-297
               
               
               Cow position:chr23:26975413-26975266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:147-321
               
               
               Cow position:chr23:4465913-4465738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:133
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:147-330
               
               
               Cow position:chr23:21539208-21539396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):153, 0

               
               
               Conread position:148-298
               
               
               Cow position:chr23:16480067-16479925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:113
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:152-298
               
               
               Cow position:chr23:2511204-2511347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:152-298
               
               
               Cow position:chr23:19295156-19295311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:152-349
               
               
               Cow position:chr23:2187006-2186801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):82, 61

               
               
               Conread position:153-294
               
               
               Cow position:chr23:38738373-38738513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:153-311
               
               
               Cow position:chr23:40494378-40494547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:153-320
               
               
               Cow position:chr23:2563722-2563888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:121
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:153-329
               
               
               Cow position:chr23:30041979-30042158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):145, 0

               
               
               Conread position:167-298
               
               
               Cow position:chr23:27307819-27307950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:104
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:167-329
               
               
               Cow position:chr23:1647913-1648072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:171-279
               
               
               Cow position:chr23:18978862-18978754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:109
               
               
               Alignm identity:87
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:181-321
               
               
               Cow position:chr23:19822381-19822241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:106
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:199-348
               
               
               Cow position:chr23:12031512-12031661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:113
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):97, 124

               
               
               Conread position:316-691
               
               
               Cow position:chr23:7370514-7370913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:263
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):34, 162

               
               
               Conread position:372-688
               
               
               Cow position:chr23:644015-643676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:242
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):6, 92

               
               
               Conread position:375-696
               
               
               Cow position:chr23:17877150-17876809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:225
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):158, 48

               
               
               Conread position:376-688
               
               
               Cow position:chr23:1552593-1552268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:225
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):156, 108

               
               
               Conread position:377-689
               
               
               Cow position:chr23:8705592-8705926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:238
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):157, 129

               
               
               Conread position:377-691
               
               
               Cow position:chr23:3285487-3285824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:236
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):162, 131

               
               
               Conread position:377-691
               
               
               Cow position:chr23:4516269-4516606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:224
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):162, 131

               
               
               Conread position:377-696
               
               
               Cow position:chr23:21773178-21772840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:237
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):155, 131

               
               
               Conread position:383-688
               
               
               Cow position:chr23:15504727-15505053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:233
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):149, 67

               
               
               Conread position:387-691
               
               
               Cow position:chr23:24119293-24119620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:227
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):138, 121

               
               
               Conread position:388-532
               
               
               Cow position:chr23:36097562-36097705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):120, 0

               
               
               Conread position:388-573
               
               
               Cow position:chr23:5411007-5411199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):144, 118

               
               
               Conread position:388-580
               
               
               Cow position:chr23:2579334-2579530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:140
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):144, 99

               
               
               Conread position:388-583
               
               
               Cow position:chr23:2410632-2410430 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-590
               
               
               Cow position:chr23:24612969-24613177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):144, 127

               
               
               Conread position:388-591
               
               
               Cow position:chr23:41096002-41095791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:153
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-593
               
               
               Cow position:chr23:6222593-6222804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):144, 68

               
               
               Conread position:388-593
               
               
               Cow position:chr23:15039563-15039357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):114, 84

               
               
               Conread position:388-593
               
               
               Cow position:chr23:29448542-29448330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:156
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):144, 117

               
               
               Conread position:388-598
               
               
               Cow position:chr23:3844298-3844081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-598
               
               
               Cow position:chr23:7492608-7492390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):125, 113

               
               
               Conread position:388-598
               
               
               Cow position:chr23:11172935-11172716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:151
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):45, 121

               
               
               Conread position:388-598
               
               
               Cow position:chr23:16367669-16367884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):27, 88

               
               
               Conread position:388-638
               
               
               Cow position:chr23:8099986-8100238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):67, 121

               
               
               Conread position:388-681
               
               
               Cow position:chr23:943720-944036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:223
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):137, 120

               
               
               Conread position:388-683
               
               
               Cow position:chr23:11781526-11781841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:222
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):144, 41

               
               
               Conread position:388-684
               
               
               Cow position:chr23:19317227-19317546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:223
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-687
               
               
               Cow position:chr23:26318041-26318347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):189, 45

               
               
               Conread position:388-688
               
               
               Cow position:chr23:14265089-14265409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:219
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):85, 123

               
               
               Conread position:388-688
               
               
               Cow position:chr23:41143180-41143503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:224
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-690
               
               
               Cow position:chr23:40888181-40888507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:237
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):153, 96

               
               
               Conread position:388-691
               
               
               Cow position:chr23:609468-609794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:1248788-1248462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:228
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:2321202-2320878 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:229
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:2368563-2368889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:226
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):95, 121

               
               
               Conread position:388-691
               
               
               Cow position:chr23:3301595-3301921 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:237
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):146, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:3417589-3417263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:226
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:3709144-3709470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):147, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:4080884-4081210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:228
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:4265876-4265550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:4532964-4532632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:227
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):82, 126

               
               
               Conread position:388-691
               
               
               Cow position:chr23:5396841-5396515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:233
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:7359203-7359526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:228
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):151, 128

               
               
               Conread position:388-691
               
               
               Cow position:chr23:10680094-10679768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:228
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):146, 124

               
               
               Conread position:388-691
               
               
               Cow position:chr23:11712928-11712602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:21008865-21008539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:24516586-24516904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):145, 122

               
               
               Conread position:388-691
               
               
               Cow position:chr23:25351099-25351425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:231
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):95, 121

               
               
               Conread position:388-691
               
               
               Cow position:chr23:28084354-28084028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:228
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:28221446-28221766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:220
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):145, 83

               
               
               Conread position:388-691
               
               
               Cow position:chr23:29442356-29442030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:232
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):144, 117

               
               
               Conread position:388-691
               
               
               Cow position:chr23:30239005-30239331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:221
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):145, 128

               
               
               Conread position:388-691
               
               
               Cow position:chr23:31605167-31605493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:31703634-31703960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:233
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-691
               
               
               Cow position:chr23:39744631-39744929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):253, 120

               
               
               Conread position:388-693
               
               
               Cow position:chr23:10422125-10421813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:210
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:388-693
               
               
               Cow position:chr23:20540559-20540888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:231
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):66, 172

               
               
               Conread position:388-696
               
               
               Cow position:chr23:32008637-32008306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:228
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):144, 120

               
               
               Conread position:389-527
               
               
               Cow position:chr23:1011087-1010948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:107
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:389-532
               
               
               Cow position:chr23:10417750-10417611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:389-593
               
               
               Cow position:chr23:4637582-4637372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):136, 95

               
               
               Conread position:389-593
               
               
               Cow position:chr23:11343238-11343448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):143, 62

               
               
               Conread position:389-650
               
               
               Cow position:chr23:35928660-35928948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):73, 120

               
               
               Conread position:389-680
               
               
               Cow position:chr23:2720196-2720510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):143, 117

               
               
               Conread position:389-681
               
               
               Cow position:chr23:36028637-36028323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:228
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):143, 50

               
               
               Conread position:389-687
               
               
               Cow position:chr23:31892785-31893098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:220
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):163, 86

               
               
               Conread position:389-688
               
               
               Cow position:chr23:2437439-2437120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):163, 119

               
               
               Conread position:389-688
               
               
               Cow position:chr23:15528328-15528649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:223
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):143, 65

               
               
               Conread position:389-688
               
               
               Cow position:chr23:20153479-20153159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:227
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):144, 90

               
               
               Conread position:389-690
               
               
               Cow position:chr23:14960207-14959884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:230
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):143, 50

               
               
               Conread position:389-696
               
               
               Cow position:chr23:2792024-2791695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):143, 117

               
               
               Conread position:389-696
               
               
               Cow position:chr23:5624835-5624502 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:236
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):68, 119

               
               
               Conread position:389-696
               
               
               Cow position:chr23:5871820-5871493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:228
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):65, 96

               
               
               Conread position:389-696
               
               
               Cow position:chr23:17845749-17846068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:226
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):142, 22

               
               
               Conread position:389-696
               
               
               Cow position:chr23:22144571-22144238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:228
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):139, 119

               
               
               Conread position:389-696
               
               
               Cow position:chr23:30634854-30634524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:232
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):136, 117

               
               
               Conread position:390-593
               
               
               Cow position:chr23:16496529-16496319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):139, 0

               
               
               Conread position:390-593
               
               
               Cow position:chr23:19492301-19492508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:157
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):149, 54

               
               
               Conread position:390-593
               
               
               Cow position:chr23:22989136-22988926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:152
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):142, 118

               
               
               Conread position:390-593
               
               
               Cow position:chr23:31647333-31647127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):141, 61

               
               
               Conread position:390-689
               
               
               Cow position:chr23:1958871-1959192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:225
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):143, 115

               
               
               Conread position:390-691
               
               
               Cow position:chr23:1338731-1338417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:219
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):137, 118

               
               
               Conread position:390-693
               
               
               Cow position:chr23:4891437-4891763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:227
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):135, 116

               
               
               Conread position:390-696
               
               
               Cow position:chr23:2024342-2024014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:230
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):143, 89

               
               
               Conread position:390-696
               
               
               Cow position:chr23:37199774-37199444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:226
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):69, 117

               
               
               Conread position:391-688
               
               
               Cow position:chr23:16056464-16056774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:209
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):142, 10

               
               
               Conread position:391-691
               
               
               Cow position:chr23:25593771-25594089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:224
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):158, 69

               
               
               Conread position:391-691
               
               
               Cow position:chr23:38583684-38583984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):141, 61

               
               
               Conread position:391-693
               
               
               Cow position:chr23:22169633-22169957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:226
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):141, 117

               
               
               Conread position:392-567
               
               
               Cow position:chr23:1114827-1115003 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):59, 117

               
               
               Conread position:392-593
               
               
               Cow position:chr23:2039795-2040002 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):18, 48

               
               
               Conread position:392-696
               
               
               Cow position:chr23:616517-616199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):164, 92

               
               
               Conread position:392-696
               
               
               Cow position:chr23:1049130-1048803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:226
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):142, 114

               
               
               Conread position:392-696
               
               
               Cow position:chr23:2760645-2760969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:227
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):153, 114

               
               
               Conread position:392-696
               
               
               Cow position:chr23:27401880-27402207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:234
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):140, 61

               
               
               Conread position:396-593
               
               
               Cow position:chr23:25671011-25670805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):6, 122

               
               
               Conread position:399-598
               
               
               Cow position:chr23:32493017-32493223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):130, 0

               
               
               Conread position:400-605
               
               
               Cow position:chr23:15658807-15658600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):139, 52

               
               
               Conread position:402-693
               
               
               Cow position:chr23:33434455-33434147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:220
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):130, 69

               
               
               Conread position:403-593
               
               
               Cow position:chr23:1800390-1800586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):130, 105

               
               
               Conread position:404-593
               
               
               Cow position:chr23:3878357-3878164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):128, 8

               
               
               Conread position:406-691
               
               
               Cow position:chr23:4799412-4799111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:211
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):91, 27

               
               
               Conread position:407-691
               
               
               Cow position:chr23:4436391-4436697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):132, 101

               
               
               Conread position:410-691
               
               
               Cow position:chr23:670652-670956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:214
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):122, 96

               
               
               Conread position:412-691
               
               
               Cow position:chr23:14216459-14216158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:209
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):117, 51

               
               
               Conread position:414-687
               
               
               Cow position:chr23:28987115-28987412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):59, 95

               
               
               Conread position:444-691
               
               
               Cow position:chr23:10904711-10904955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):17, 28
Show alignments to all cow chromosomes.