Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056C10.5
        

               Conread position:
               7-326
               

               Cow position:
               chr29:414722-415043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               12-223
               

               Cow position:
               chr29:32926011-32926230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               12-268
               

               Cow position:
               chr29:30548689-30548944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               13-200
               

               Cow position:
               chr29:18012471-18012660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               13-222
               

               Cow position:
               chr29:17409252-17409459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               13-231
               

               Cow position:
               chr29:26991160-26991375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 114
               

               Conread position:
               13-237
               

               Cow position:
               chr29:26995179-26995394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               13-298
               

               Cow position:
               chr29:1306945-1306665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               13-298
               

               Cow position:
               chr29:2055975-2056258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 206
               

               Conread position:
               13-298
               

               Cow position:
               chr29:10058623-10058345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               64, 178
               

               Conread position:
               13-298
               

               Cow position:
               chr29:29057096-29057377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               13-316
               

               Cow position:
               chr29:23844748-23845057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               13-331
               

               Cow position:
               chr29:3584194-3583887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               14-141
               

               Cow position:
               chr29:12004843-12004720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-148
               

               Cow position:
               chr29:25839612-25839750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-155
               

               Cow position:
               chr29:17301447-17301591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               14-173
               

               Cow position:
               chr29:17192-17037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               14-187
               

               Cow position:
               chr29:868693-868864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 49
               

               Conread position:
               14-195
               

               Cow position:
               chr29:23984040-23983858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               14-197
               

               Cow position:
               chr29:9638399-9638221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               14-198
               

               Cow position:
               chr29:2984806-2984990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-200
               

               Cow position:
               chr29:27329810-27329994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               14-201
               

               Cow position:
               chr29:12626061-12625873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               14-201
               

               Cow position:
               chr29:26615804-26615614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               14-203
               

               Cow position:
               chr29:24578776-24578968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               14-206
               

               Cow position:
               chr29:1229526-1229715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               14-208
               

               Cow position:
               chr29:26416269-26416460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 99
               

               Conread position:
               14-209
               

               Cow position:
               chr29:694083-693898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               14-209
               

               Cow position:
               chr29:6015040-6015237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               14-209
               

               Cow position:
               chr29:10235215-10235027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               14-209
               

               Cow position:
               chr29:11677540-11677351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-209
               

               Cow position:
               chr29:17607333-17607527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               123, 166
               

               Conread position:
               14-212
               

               Cow position:
               chr29:43495966-43496154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               176, 51
               

               Conread position:
               14-216
               

               Cow position:
               chr29:4367640-4367844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 66
               

               Conread position:
               14-217
               

               Cow position:
               chr29:4444632-4444838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               14-222
               

               Cow position:
               chr29:847723-847518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               14-224
               

               Cow position:
               chr29:356237-356448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               130, 51
               

               Conread position:
               14-224
               

               Cow position:
               chr29:15940716-15940511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               14-224
               

               Cow position:
               chr29:21941517-21941731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               14-224
               

               Cow position:
               chr29:32963474-32963663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-225
               

               Cow position:
               chr29:11647007-11647221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               14-227
               

               Cow position:
               chr29:36217035-36217239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               14-228
               

               Cow position:
               chr29:19338905-19339131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               14-229
               

               Cow position:
               chr29:32290526-32290741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               125, 54
               

               Conread position:
               14-230
               

               Cow position:
               chr29:40096881-40097094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 120
               

               Conread position:
               14-232
               

               Cow position:
               chr29:749992-749771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               14-232
               

               Cow position:
               chr29:26559323-26559112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               14-232
               

               Cow position:
               chr29:29314737-29314526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               14-234
               

               Cow position:
               chr29:5186578-5186354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               14-237
               

               Cow position:
               chr29:6207982-6208199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 64
               

               Conread position:
               14-237
               

               Cow position:
               chr29:13127204-13126981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               14-237
               

               Cow position:
               chr29:18021763-18021544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               14-237
               

               Cow position:
               chr29:22895639-22895866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               31, 183
               

               Conread position:
               14-237
               

               Cow position:
               chr29:29512223-29512002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               14-251
               

               Cow position:
               chr29:1325358-1325589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               55, 44
               

               Conread position:
               14-269
               

               Cow position:
               chr29:87098-86835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               40, 184
               

               Conread position:
               14-269
               

               Cow position:
               chr29:29795467-29795211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               14-273
               

               Cow position:
               chr29:8176569-8176830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 245
               

               Conread position:
               14-275
               

               Cow position:
               chr29:17168323-17168580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               14-286
               

               Cow position:
               chr29:26017584-26017314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               14-288
               

               Cow position:
               chr29:39111397-39111136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               57, 148
               

               Conread position:
               14-290
               

               Cow position:
               chr29:4520253-4520522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               14-291
               

               Cow position:
               chr29:1395514-1395763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               14-293
               

               Cow position:
               chr29:34359062-34358786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               127, 11
               

               Conread position:
               14-293
               

               Cow position:
               chr29:43099829-43099556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               127, 54
               

               Conread position:
               14-294
               

               Cow position:
               chr29:4480254-4479973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               127, 54
               

               Conread position:
               14-294
               

               Cow position:
               chr29:10653261-10653516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               126, 17
               

               Conread position:
               14-295
               

               Cow position:
               chr29:34745743-34745466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               14-298
               

               Cow position:
               chr29:1614843-1615125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               14-298
               

               Cow position:
               chr29:5892760-5893044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               14-298
               

               Cow position:
               chr29:6337579-6337848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 54
               

               Conread position:
               14-298
               

               Cow position:
               chr29:11434041-11434310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               125, 8
               

               Conread position:
               14-298
               

               Cow position:
               chr29:14501509-14501793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               14-298
               

               Cow position:
               chr29:18878578-18878284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               14-298
               

               Cow position:
               chr29:25474838-25475129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 280
               

               Conread position:
               14-298
               

               Cow position:
               chr29:26477457-26477742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               89, 277
               

               Conread position:
               14-298
               

               Cow position:
               chr29:26778798-26779074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               14-298
               

               Cow position:
               chr29:38580895-38581190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               14-298
               

               Cow position:
               chr29:40583711-40583983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               197, 49
               

               Conread position:
               14-298
               

               Cow position:
               chr29:40891778-40891509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               14-308
               

               Cow position:
               chr29:31674548-31674840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               14-314
               

               Cow position:
               chr29:3711308-3711590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               125, 71
               

               Conread position:
               14-315
               

               Cow position:
               chr29:10018494-10018784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 159
               

               Conread position:
               14-315
               

               Cow position:
               chr29:36530785-36531081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               14-316
               

               Cow position:
               chr29:11398006-11397696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               14-316
               

               Cow position:
               chr29:20770261-20770556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               14-316
               

               Cow position:
               chr29:28674789-28674485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               14-316
               

               Cow position:
               chr29:29769433-29769135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               14-317
               

               Cow position:
               chr29:5063065-5063360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               127, 51
               

               Conread position:
               14-317
               

               Cow position:
               chr29:29942812-29942508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 238
               

               Conread position:
               14-319
               

               Cow position:
               chr29:25284545-25284245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               125, 54
               

               Conread position:
               14-321
               

               Cow position:
               chr29:9709613-9709911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               14-321
               

               Cow position:
               chr29:12680076-12680376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               14-321
               

               Cow position:
               chr29:31928899-31929205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               14-321
               

               Cow position:
               chr29:40117486-40117783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               14-322
               

               Cow position:
               chr29:16609660-16609972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 304
               

               Conread position:
               14-322
               

               Cow position:
               chr29:23874377-23874684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 17
               

               Conread position:
               14-322
               

               Cow position:
               chr29:27009334-27009648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               14-322
               

               Cow position:
               chr29:29475335-29475031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               97, 42
               

               Conread position:
               14-322
               

               Cow position:
               chr29:30440849-30441160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 168
               

               Conread position:
               14-323
               

               Cow position:
               chr29:8669283-8669573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               14-323
               

               Cow position:
               chr29:22162335-22162043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               57, 179
               

               Conread position:
               14-324
               

               Cow position:
               chr29:10838868-10839160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               14-324
               

               Cow position:
               chr29:11915738-11916047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 117
               

               Conread position:
               14-327
               

               Cow position:
               chr29:19949219-19949527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 129
               

               Conread position:
               14-328
               

               Cow position:
               chr29:23697897-23698196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               14-329
               

               Cow position:
               chr29:4120766-4121087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               14-330
               

               Cow position:
               chr29:22068828-22068515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 179
               

               Conread position:
               14-331
               

               Cow position:
               chr29:17154685-17154993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               55, 125
               

               Conread position:
               14-331
               

               Cow position:
               chr29:32894186-32894493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               14-332
               

               Cow position:
               chr29:35292006-35292319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 203
               

               Conread position:
               14-334
               

               Cow position:
               chr29:6755916-6756219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               308, 40
               

               Conread position:
               14-336
               

               Cow position:
               chr29:35677629-35677302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               15-194
               

               Cow position:
               chr29:9455138-9454962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               15-200
               

               Cow position:
               chr29:19821206-19821385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               15-209
               

               Cow position:
               chr29:11005650-11005846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               15-209
               

               Cow position:
               chr29:39567606-39567792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-214
               

               Cow position:
               chr29:20903366-20903174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               126, 13
               

               Conread position:
               15-218
               

               Cow position:
               chr29:37961058-37960855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               15-223
               

               Cow position:
               chr29:43251249-43251040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               15-224
               

               Cow position:
               chr29:6286239-6286035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               126, 43
               

               Conread position:
               15-229
               

               Cow position:
               chr29:41811669-41811458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               198, 53
               

               Conread position:
               15-232
               

               Cow position:
               chr29:10156386-10156172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               15-243
               

               Cow position:
               chr29:1556850-1557072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 40
               

               Conread position:
               15-285
               

               Cow position:
               chr29:27618799-27619066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               15-294
               

               Cow position:
               chr29:4085238-4085490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               15-295
               

               Cow position:
               chr29:28993779-28994051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               15-323
               

               Cow position:
               chr29:18754947-18754638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               15-352
               

               Cow position:
               chr29:26269985-26270320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               16-156
               

               Cow position:
               chr29:3704281-3704140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               16-162
               

               Cow position:
               chr29:13486869-13487015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               123, 52
               

               Conread position:
               16-182
               

               Cow position:
               chr29:4052070-4051907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               47, 75
               

               Conread position:
               16-188
               

               Cow position:
               chr29:41365032-41365199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               16-194
               

               Cow position:
               chr29:11719884-11720063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               16-198
               

               Cow position:
               chr29:44236371-44236553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               16-202
               

               Cow position:
               chr29:44008861-44008681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               16-206
               

               Cow position:
               chr29:27873524-27873709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               16-207
               

               Cow position:
               chr29:463738-463543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 176
               

               Conread position:
               16-209
               

               Cow position:
               chr29:6293554-6293369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               16-209
               

               Cow position:
               chr29:9912092-9912286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 181
               

               Conread position:
               16-210
               

               Cow position:
               chr29:8005003-8004815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-212
               

               Cow position:
               chr29:4334648-4334832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               16-212
               

               Cow position:
               chr29:11053939-11053745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               125, 47
               

               Conread position:
               16-212
               

               Cow position:
               chr29:19428579-19428774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               123, 46
               

               Conread position:
               16-212
               

               Cow position:
               chr29:31926369-31926186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               16-213
               

               Cow position:
               chr29:22936190-22936386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 52
               

               Conread position:
               16-223
               

               Cow position:
               chr29:11705043-11705238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               189, 29
               

               Conread position:
               16-225
               

               Cow position:
               chr29:13372585-13372790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               123, 46
               

               Conread position:
               16-225
               

               Cow position:
               chr29:25333542-25333334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               16-232
               

               Cow position:
               chr29:6844708-6844498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               114, 25
               

               Conread position:
               16-232
               

               Cow position:
               chr29:8926543-8926327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               16-232
               

               Cow position:
               chr29:24252158-24252371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               16-233
               

               Cow position:
               chr29:22175607-22175815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               124, 47
               

               Conread position:
               16-235
               

               Cow position:
               chr29:707031-706823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               16-237
               

               Cow position:
               chr29:31813868-31814080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               16-266
               

               Cow position:
               chr29:30713789-30713551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               16-267
               

               Cow position:
               chr29:12025550-12025309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               16-267
               

               Cow position:
               chr29:13639450-13639197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               16-283
               

               Cow position:
               chr29:18556585-18556850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 207
               

               Conread position:
               16-284
               

               Cow position:
               chr29:12784036-12783771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               187, 49
               

               Conread position:
               16-287
               

               Cow position:
               chr29:24045913-24046185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               16-295
               

               Cow position:
               chr29:23389636-23389371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               16-295
               

               Cow position:
               chr29:23813116-23812853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               16-297
               

               Cow position:
               chr29:2744352-2744072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 171
               

               Conread position:
               16-298
               

               Cow position:
               chr29:17297054-17297336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 52
               

               Conread position:
               16-298
               

               Cow position:
               chr29:20167342-20167621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 47
               

               Conread position:
               16-298
               

               Cow position:
               chr29:21666007-21666284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               125, 46
               

               Conread position:
               16-298
               

               Cow position:
               chr29:35084302-35084025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 34
               

               Conread position:
               16-299
               

               Cow position:
               chr29:24952608-24952886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               16-301
               

               Cow position:
               chr29:5409220-5408941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 29
               

               Conread position:
               16-301
               

               Cow position:
               chr29:31489241-31489525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 42
               

               Conread position:
               16-305
               

               Cow position:
               chr29:3502487-3502767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 126
               

               Conread position:
               16-305
               

               Cow position:
               chr29:3825893-3826171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               124, 11
               

               Conread position:
               16-312
               

               Cow position:
               chr29:25092032-25092315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               16-312
               

               Cow position:
               chr29:29551772-29552059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               16-314
               

               Cow position:
               chr29:13028357-13028663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               16-315
               

               Cow position:
               chr29:11611759-11612061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               16-315
               

               Cow position:
               chr29:44378495-44378190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               189, 57
               

               Conread position:
               16-317
               

               Cow position:
               chr29:22613346-22613636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               16-317
               

               Cow position:
               chr29:27833909-27834204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               16-318
               

               Cow position:
               chr29:465478-465176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 38
               

               Conread position:
               16-318
               

               Cow position:
               chr29:16657610-16657909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               16-320
               

               Cow position:
               chr29:20243889-20243587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               16-320
               

               Cow position:
               chr29:30227353-30227061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               16-321
               

               Cow position:
               chr29:24292790-24293091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               16-322
               

               Cow position:
               chr29:27858714-27859011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               16-323
               

               Cow position:
               chr29:41530767-41531074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 177
               

               Conread position:
               16-324
               

               Cow position:
               chr29:5175877-5176190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               16-327
               

               Cow position:
               chr29:4625077-4624770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               287, 38
               

               Conread position:
               16-327
               

               Cow position:
               chr29:15738422-15738123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               16-329
               

               Cow position:
               chr29:25814918-25814605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 43
               

               Conread position:
               16-353
               

               Cow position:
               chr29:20924824-20925164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               58, 38
               

               Conread position:
               16-364
               

               Cow position:
               chr29:22519210-22518858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               17-166
               

               Cow position:
               chr29:9139334-9139489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 121
               

               Conread position:
               17-209
               

               Cow position:
               chr29:22721294-22721483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               17-232
               

               Cow position:
               chr29:13867291-13867075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               17-312
               

               Cow position:
               chr29:26334467-26334177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               117, 39
               

               Conread position:
               17-315
               

               Cow position:
               chr29:36248956-36249254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               123, 22
               

               Conread position:
               17-328
               

               Cow position:
               chr29:2263076-2262756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               18-230
               

               Cow position:
               chr29:13373221-13373433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               18-298
               

               Cow position:
               chr29:36220448-36220741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               18-298
               

               Cow position:
               chr29:42771571-42771851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               122, 26
               

               Conread position:
               18-301
               

               Cow position:
               chr29:22778255-22777980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               155, 50
               

               Conread position:
               18-320
               

               Cow position:
               chr29:3237433-3237127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               125, 40
               

               Conread position:
               18-324
               

               Cow position:
               chr29:20910772-20910465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               18-325
               

               Cow position:
               chr29:1022217-1022521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               18-342
               

               Cow position:
               chr29:43183386-43183077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 10
               

               Conread position:
               19-209
               

               Cow position:
               chr29:8862555-8862370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               19-266
               

               Cow position:
               chr29:21443418-21443170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               20-193
               

               Cow position:
               chr29:32521793-32521965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               20-232
               

               Cow position:
               chr29:18404191-18403983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               20-295
               

               Cow position:
               chr29:17222337-17222611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               20-298
               

               Cow position:
               chr29:21196728-21196454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               20-298
               

               Cow position:
               chr29:27816277-27816534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               20-319
               

               Cow position:
               chr29:27668739-27668436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               118, 292
               

               Conread position:
               21-145
               

               Cow position:
               chr29:28559268-28559391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 42
               

               Conread position:
               21-232
               

               Cow position:
               chr29:23220577-23220366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               21-233
               

               Cow position:
               chr29:7103480-7103693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               21-266
               

               Cow position:
               chr29:45589666-45589434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               21-293
               

               Cow position:
               chr29:8292991-8292720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               21-317
               

               Cow position:
               chr29:38348106-38347817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               21-322
               

               Cow position:
               chr29:34297646-34297347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               22-173
               

               Cow position:
               chr29:17668413-17668562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               22-214
               

               Cow position:
               chr29:4002813-4003008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               22-243
               

               Cow position:
               chr29:45005707-45005480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               22-252
               

               Cow position:
               chr29:14112302-14112537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               93, 171
               

               Conread position:
               22-298
               

               Cow position:
               chr29:22029032-22028763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               49, 118
               

               Conread position:
               22-316
               

               Cow position:
               chr29:22647768-22648064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               22-316
               

               Cow position:
               chr29:34744698-34744413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               22-317
               

               Cow position:
               chr29:16195768-16196072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               117, 36
               

               Conread position:
               23-213
               

               Cow position:
               chr29:5210413-5210606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               23-275
               

               Cow position:
               chr29:22184185-22184436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               24-287
               

               Cow position:
               chr29:20933632-20933902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               28-312
               

               Cow position:
               chr29:31092382-31092660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               30-223
               

               Cow position:
               chr29:40852862-40853053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               30-298
               

               Cow position:
               chr29:27911526-27911790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               30-305
               

               Cow position:
               chr29:32733231-32733507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               30-312
               

               Cow position:
               chr29:27926709-27926986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               31-212
               

               Cow position:
               chr29:23825603-23825787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               31-232
               

               Cow position:
               chr29:4691458-4691254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 199
               

               Conread position:
               31-298
               

               Cow position:
               chr29:40994955-40994681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 32
               

               Conread position:
               31-328
               

               Cow position:
               chr29:37618236-37618537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               32-171
               

               Cow position:
               chr29:2071637-2071496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               89, 31
               

               Conread position:
               32-186
               

               Cow position:
               chr29:36830295-36830446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               32-196
               

               Cow position:
               chr29:26330143-26330295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               32-221
               

               Cow position:
               chr29:12309945-12310131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 22
               

               Conread position:
               32-237
               

               Cow position:
               chr29:30350999-30350792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 190
               

               Conread position:
               32-250
               

               Cow position:
               chr29:109633-109830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               32-256
               

               Cow position:
               chr29:26654104-26653887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               32-269
               

               Cow position:
               chr29:28775523-28775294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               111, 13
               

               Conread position:
               32-275
               

               Cow position:
               chr29:40633582-40633828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 26
               

               Conread position:
               32-284
               

               Cow position:
               chr29:36632926-36632676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               32-294
               

               Cow position:
               chr29:24624182-24624435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               32-294
               

               Cow position:
               chr29:30367122-30366861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               169, 36
               

               Conread position:
               32-298
               

               Cow position:
               chr29:18450199-18449940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               32-323
               

               Cow position:
               chr29:32799772-32799480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 66
               

               Conread position:
               32-329
               

               Cow position:
               chr29:5046588-5046884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               32-332
               

               Cow position:
               chr29:28195577-28195300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               285, 31
               

               Conread position:
               33-189
               

               Cow position:
               chr29:26263772-26263927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               33-199
               

               Cow position:
               chr29:28868572-28868744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               33-273
               

               Cow position:
               chr29:7621628-7621385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               71, 22
               

               Conread position:
               33-295
               

               Cow position:
               chr29:1011637-1011398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               33-299
               

               Cow position:
               chr29:19125259-19125529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               33-310
               

               Cow position:
               chr29:23711978-23711694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               33-315
               

               Cow position:
               chr29:5995164-5994875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 162
               

               Conread position:
               34-223
               

               Cow position:
               chr29:4874950-4874755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               34-233
               

               Cow position:
               chr29:20260938-20260729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               34-248
               

               Cow position:
               chr29:7966177-7966393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               46, 143
               

               Conread position:
               34-281
               

               Cow position:
               chr29:23825283-23825031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 201
               

               Conread position:
               34-292
               

               Cow position:
               chr29:501137-501393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               34-294
               

               Cow position:
               chr29:19762208-19762457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               34-298
               

               Cow position:
               chr29:25737480-25737221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 195
               

               Conread position:
               34-298
               

               Cow position:
               chr29:28735107-28734849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               34-298
               

               Cow position:
               chr29:44139308-44139047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               34-305
               

               Cow position:
               chr29:38396301-38396569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               34-316
               

               Cow position:
               chr29:31786608-31786888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               34-327
               

               Cow position:
               chr29:35458835-35458543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 24
               

               Conread position:
               34-334
               

               Cow position:
               chr29:28587387-28587679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 168
               

               Conread position:
               35-313
               

               Cow position:
               chr29:41112936-41112674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               36-148
               

               Cow position:
               chr29:5445782-5445670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               36-287
               

               Cow position:
               chr29:4423500-4423263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               36-298
               

               Cow position:
               chr29:19756374-19756635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               91, 22
               

               Conread position:
               36-298
               

               Cow position:
               chr29:29923636-29923378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               36-312
               

               Cow position:
               chr29:17462846-17462566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               37-223
               

               Cow position:
               chr29:21285300-21285484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               37-272
               

               Cow position:
               chr29:44988848-44988632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               103, 34
               

               Conread position:
               37-301
               

               Cow position:
               chr29:26275548-26275802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               39-213
               

               Cow position:
               chr29:37599266-37599105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               39-223
               

               Cow position:
               chr29:30708678-30708498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               39-284
               

               Cow position:
               chr29:43544659-43544421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               39-298
               

               Cow position:
               chr29:15947110-15947367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               39-311
               

               Cow position:
               chr29:32656374-32656648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               39-316
               

               Cow position:
               chr29:39131521-39131240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               39-320
               

               Cow position:
               chr29:30681769-30681481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               39-323
               

               Cow position:
               chr29:28204209-28204487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               39-323
               

               Cow position:
               chr29:42630064-42630340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               40-298
               

               Cow position:
               chr29:22167138-22166889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               40-317
               

               Cow position:
               chr29:7109278-7109560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               44-282
               

               Cow position:
               chr29:5121921-5121679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               44-295
               

               Cow position:
               chr29:4418773-4419022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               44-298
               

               Cow position:
               chr29:23155175-23155433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               44-298
               

               Cow position:
               chr29:35405844-35405592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               44-299
               

               Cow position:
               chr29:732566-732809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 102
               

               Conread position:
               45-289
               

               Cow position:
               chr29:11844245-11843998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               45-305
               

               Cow position:
               chr29:16290673-16290928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               48-345
               

               Cow position:
               chr29:5302278-5301979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 24
               

               Conread position:
               50-308
               

               Cow position:
               chr29:9721252-9721511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               90, 228
               

               Conread position:
               50-329
               

               Cow position:
               chr29:32307601-32307339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 84
               

               Conread position:
               52-201
               

               Cow position:
               chr29:30918503-30918652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               52-324
               

               Cow position:
               chr29:28396644-28396920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 242
               

               Conread position:
               53-194
               

               Cow position:
               chr29:19559065-19558923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               53-317
               

               Cow position:
               chr29:5568443-5568710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               53-317
               

               Cow position:
               chr29:22533913-22534180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               54-295
               

               Cow position:
               chr29:33321309-33321544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               54-349
               

               Cow position:
               chr29:28739581-28739873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               55-200
               

               Cow position:
               chr29:8686287-8686432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               55-215
               

               Cow position:
               chr29:20468857-20469018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               55-298
               

               Cow position:
               chr29:30827361-30827606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               55-328
               

               Cow position:
               chr29:27524879-27524605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               55-331
               

               Cow position:
               chr29:18200740-18201019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 92
               

               Conread position:
               56-316
               

               Cow position:
               chr29:39038312-39038051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 156
               

               Conread position:
               57-225
               

               Cow position:
               chr29:34687792-34687962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               57-268
               

               Cow position:
               chr29:22723559-22723767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 160
               

               Conread position:
               57-329
               

               Cow position:
               chr29:1933613-1933341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 196
               

               Conread position:
               57-331
               

               Cow position:
               chr29:9310556-9310837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               58-298
               

               Cow position:
               chr29:5520526-5520286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 166
               

               Conread position:
               58-316
               

               Cow position:
               chr29:37438176-37437916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               59-232
               

               Cow position:
               chr29:25088706-25088876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               59-333
               

               Cow position:
               chr29:40610674-40610398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               61-188
               

               Cow position:
               chr29:40903136-40903265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               61-294
               

               Cow position:
               chr29:28066452-28066674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               62-298
               

               Cow position:
               chr29:17109923-17110151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               63-225
               

               Cow position:
               chr29:39508229-39508378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               63-237
               

               Cow position:
               chr29:21509816-21509989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               63-280
               

               Cow position:
               chr29:38581939-38582150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               63-294
               

               Cow position:
               chr29:26602157-26602394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 155
               

               Conread position:
               63-329
               

               Cow position:
               chr29:29189131-29188873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               77, 57
               

               Conread position:
               63-331
               

               Cow position:
               chr29:22720687-22720417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 98
               

               Conread position:
               64-258
               

               Cow position:
               chr29:42263057-42262864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               64-290
               

               Cow position:
               chr29:7285428-7285643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               64-298
               

               Cow position:
               chr29:20689765-20689539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               64-321
               

               Cow position:
               chr29:44684068-44684318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               64-325
               

               Cow position:
               chr29:16272707-16272969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 251
               

               Conread position:
               64-334
               

               Cow position:
               chr29:8816175-8815904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 64
               

               Conread position:
               65-209
               

               Cow position:
               chr29:27819185-27819329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               74, 131
               

               Conread position:
               65-217
               

               Cow position:
               chr29:31491191-31491350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               65-232
               

               Cow position:
               chr29:42883991-42883823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               65-275
               

               Cow position:
               chr29:19389444-19389655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               65-287
               

               Cow position:
               chr29:31981797-31982009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               76, 142
               

               Conread position:
               65-290
               

               Cow position:
               chr29:21508390-21508157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 156
               

               Conread position:
               65-291
               

               Cow position:
               chr29:21706429-21706206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 8
               

               Conread position:
               65-295
               

               Cow position:
               chr29:24188099-24187868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               65-297
               

               Cow position:
               chr29:40791276-40791494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               65-298
               

               Cow position:
               chr29:21195826-21195593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               65-299
               

               Cow position:
               chr29:2188390-2188156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               78, 146
               

               Conread position:
               65-315
               

               Cow position:
               chr29:29364090-29363850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               65-316
               

               Cow position:
               chr29:25874505-25874252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               65-318
               

               Cow position:
               chr29:4492404-4492649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 39
               

               Conread position:
               65-326
               

               Cow position:
               chr29:20527198-20526936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 250
               

               Conread position:
               66-240
               

               Cow position:
               chr29:3726989-3727171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 132
               

               Conread position:
               66-311
               

               Cow position:
               chr29:5788994-5789227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               66-316
               

               Cow position:
               chr29:396379-396618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               66-330
               

               Cow position:
               chr29:35434824-35435088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 224
               

               Conread position:
               67-213
               

               Cow position:
               chr29:27563024-27562878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               67-298
               

               Cow position:
               chr29:38858246-38858014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               67-321
               

               Cow position:
               chr29:23637712-23637454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               10, 241
               

               Conread position:
               68-209
               

               Cow position:
               chr29:5947835-5947695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               68-217
               

               Cow position:
               chr29:43252702-43252552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               68-232
               

               Cow position:
               chr29:16365919-16365751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               68-243
               

               Cow position:
               chr29:16568898-16569074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               68-258
               

               Cow position:
               chr29:41082381-41082189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               68-268
               

               Cow position:
               chr29:12900582-12900382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               72, 95
               

               Conread position:
               68-275
               

               Cow position:
               chr29:39280188-39280397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 187
               

               Conread position:
               68-281
               

               Cow position:
               chr29:19253861-19253648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 179
               

               Conread position:
               68-282
               

               Cow position:
               chr29:5769762-5769973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 109
               

               Conread position:
               68-286
               

               Cow position:
               chr29:4460093-4460312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               68-286
               

               Cow position:
               chr29:23115032-23114814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 139
               

               Conread position:
               68-287
               

               Cow position:
               chr29:17804504-17804717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               68-294
               

               Cow position:
               chr29:29324451-29324227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               142, 69
               

               Conread position:
               68-298
               

               Cow position:
               chr29:16278957-16279175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               68-298
               

               Cow position:
               chr29:36329478-36329712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               71, 136
               

               Conread position:
               68-298
               

               Cow position:
               chr29:36357098-36357326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               68-299
               

               Cow position:
               chr29:3685550-3685322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               68-317
               

               Cow position:
               chr29:7310646-7310881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               221, 67
               

               Conread position:
               68-318
               

               Cow position:
               chr29:20626535-20626785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               6, 238
               

               Conread position:
               68-319
               

               Cow position:
               chr29:4070597-4070838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               73, 43
               

               Conread position:
               68-320
               

               Cow position:
               chr29:363218-363471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 211
               

               Conread position:
               68-321
               

               Cow position:
               chr29:29588957-29588705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               72, 132
               

               Conread position:
               68-322
               

               Cow position:
               chr29:25944334-25944073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 237
               

               Conread position:
               68-322
               

               Cow position:
               chr29:36522390-36522130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               68-326
               

               Cow position:
               chr29:20673841-20673580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               68-327
               

               Cow position:
               chr29:15944529-15944789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               68-329
               

               Cow position:
               chr29:25950190-25949922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 199
               

               Conread position:
               69-227
               

               Cow position:
               chr29:42886513-42886675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               69-232
               

               Cow position:
               chr29:11042402-11042562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 105
               

               Conread position:
               69-293
               

               Cow position:
               chr29:7956020-7955795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               69-294
               

               Cow position:
               chr29:4492089-4491859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 193
               

               Conread position:
               69-298
               

               Cow position:
               chr29:28814010-28813774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               69-298
               

               Cow position:
               chr29:35258955-35259179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               69-320
               

               Cow position:
               chr29:35501684-35501449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               70-232
               

               Cow position:
               chr29:40299049-40298886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               140
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               70-294
               

               Cow position:
               chr29:26540569-26540346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 130
               

               Conread position:
               70-294
               

               Cow position:
               chr29:31934350-31934570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               70-298
               

               Cow position:
               chr29:21645289-21645515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               158, 54
               

               Conread position:
               70-313
               

               Cow position:
               chr29:26995688-26995942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               70-317
               

               Cow position:
               chr29:25268101-25268353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               46, 240
               

               Conread position:
               70-326
               

               Cow position:
               chr29:22690196-22690452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               71, 238
               

               Conread position:
               71-233
               

               Cow position:
               chr29:32211094-32210936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               71-298
               

               Cow position:
               chr29:22735133-22734908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               72-282
               

               Cow position:
               chr29:5109211-5109001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 123
               

               Conread position:
               72-298
               

               Cow position:
               chr29:28420728-28420955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               72-316
               

               Cow position:
               chr29:16652123-16652379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               72-329
               

               Cow position:
               chr29:36586540-36586800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               72-331
               

               Cow position:
               chr29:3549576-3549844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               73-286
               

               Cow position:
               chr29:7124786-7125007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               73-286
               

               Cow position:
               chr29:34359847-34359640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               73-291
               

               Cow position:
               chr29:11227415-11227190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               73-298
               

               Cow position:
               chr29:44938016-44937797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               73-316
               

               Cow position:
               chr29:19909930-19910180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               73-353
               

               Cow position:
               chr29:39329629-39329335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 248
               

               Conread position:
               74-225
               

               Cow position:
               chr29:28166245-28166095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               74-298
               

               Cow position:
               chr29:23951606-23951379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               74-332
               

               Cow position:
               chr29:6636060-6636310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               75-187
               

               Cow position:
               chr29:26319145-26319254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               75-295
               

               Cow position:
               chr29:31651387-31651597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 111
               

               Conread position:
               76-298
               

               Cow position:
               chr29:32656115-32655896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               64, 145
               

               Conread position:
               76-325
               

               Cow position:
               chr29:7290753-7290994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 143
               

               Conread position:
               76-328
               

               Cow position:
               chr29:8163850-8163599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               77-323
               

               Cow position:
               chr29:22729545-22729786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               78-231
               

               Cow position:
               chr29:1220152-1219998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               78-272
               

               Cow position:
               chr29:20780991-20781192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               78-287
               

               Cow position:
               chr29:42444586-42444786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               138, 35
               

               Conread position:
               78-295
               

               Cow position:
               chr29:34832406-34832198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               126, 55
               

               Conread position:
               78-323
               

               Cow position:
               chr29:30294886-30294647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               238, 54
               

               Conread position:
               78-353
               

               Cow position:
               chr29:28979519-28979266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               79-296
               

               Cow position:
               chr29:3292928-3293139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 120
               

               Conread position:
               79-320
               

               Cow position:
               chr29:26259456-26259697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 148
               

               Conread position:
               80-221
               

               Cow position:
               chr29:34517502-34517368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               80-223
               

               Cow position:
               chr29:34760432-34760292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               80-232
               

               Cow position:
               chr29:11527808-11527658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               80-275
               

               Cow position:
               chr29:29974034-29973838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               80-316
               

               Cow position:
               chr29:38754958-38754722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               81-298
               

               Cow position:
               chr29:9378619-9378833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 148
               

               Conread position:
               82-268
               

               Cow position:
               chr29:24051398-24051210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               82-294
               

               Cow position:
               chr29:19176930-19176721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               84-220
               

               Cow position:
               chr29:21592693-21592828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               84-298
               

               Cow position:
               chr29:7585144-7584929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               84-311
               

               Cow position:
               chr29:29183702-29183933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               84-315
               

               Cow position:
               chr29:16200493-16200261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               84-321
               

               Cow position:
               chr29:23876849-23876617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 194
               

               Conread position:
               84-328
               

               Cow position:
               chr29:33511744-33511500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 225
               

               Conread position:
               84-330
               

               Cow position:
               chr29:5831035-5830787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               85-298
               

               Cow position:
               chr29:29308586-29308384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 128
               

               Conread position:
               86-209
               

               Cow position:
               chr29:12452783-12452906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 106
               

               Conread position:
               86-211
               

               Cow position:
               chr29:37046714-37046588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               86-213
               

               Cow position:
               chr29:13615662-13615540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               86-311
               

               Cow position:
               chr29:377452-377225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               86-318
               

               Cow position:
               chr29:36781317-36781091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               86-329
               

               Cow position:
               chr29:21018759-21018514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               86-332
               

               Cow position:
               chr29:21933134-21932887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 160
               

               Conread position:
               86-334
               

               Cow position:
               chr29:6819601-6819854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               87-284
               

               Cow position:
               chr29:24365908-24365713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               87-286
               

               Cow position:
               chr29:14552686-14552886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               87-295
               

               Cow position:
               chr29:23819404-23819189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               87-298
               

               Cow position:
               chr29:5953871-5953658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               87-317
               

               Cow position:
               chr29:36210134-36210367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               128, 58
               

               Conread position:
               88-319
               

               Cow position:
               chr29:19363700-19363927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               88-329
               

               Cow position:
               chr29:20256217-20256450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               215, 46
               

               Conread position:
               89-286
               

               Cow position:
               chr29:20772432-20772233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               89-317
               

               Cow position:
               chr29:28478317-28478550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 118
               

               Conread position:
               90-232
               

               Cow position:
               chr29:16672482-16672624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               90-296
               

               Cow position:
               chr29:7954976-7954768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               90-343
               

               Cow position:
               chr29:29579662-29579926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 181
               

               Conread position:
               92-287
               

               Cow position:
               chr29:23913400-23913210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 124
               

               Conread position:
               93-213
               

               Cow position:
               chr29:19244465-19244343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-298
               

               Cow position:
               chr29:4022998-4023194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               93-323
               

               Cow position:
               chr29:18748394-18748168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               93-327
               

               Cow position:
               chr29:32713155-32713392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               94-233
               

               Cow position:
               chr29:18579839-18579704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               94-294
               

               Cow position:
               chr29:15796481-15796678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               94-298
               

               Cow position:
               chr29:15797947-15798149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 174
               

               Conread position:
               94-329
               

               Cow position:
               chr29:17436744-17436978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               97-298
               

               Cow position:
               chr29:629536-629735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               97-317
               

               Cow position:
               chr29:4441207-4440989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               97-317
               

               Cow position:
               chr29:29578975-29578753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               97-320
               

               Cow position:
               chr29:14375883-14375658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               97-323
               

               Cow position:
               chr29:42886971-42887193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               98-249
               

               Cow position:
               chr29:26052349-26052501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-293
               

               Cow position:
               chr29:29544516-29544720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               98-294
               

               Cow position:
               chr29:8634653-8634846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               98-298
               

               Cow position:
               chr29:23539390-23539573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               98-315
               

               Cow position:
               chr29:8979575-8979356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               98-317
               

               Cow position:
               chr29:14576858-14577072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               98-317
               

               Cow position:
               chr29:31221748-31221959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               98-321
               

               Cow position:
               chr29:22579470-22579696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               98-327
               

               Cow position:
               chr29:26990492-26990735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               98-328
               

               Cow position:
               chr29:29546018-29546246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               98-348
               

               Cow position:
               chr29:20087381-20087132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               99-213
               

               Cow position:
               chr29:19060082-19059968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               99-213
               

               Cow position:
               chr29:35636662-35636773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               99-243
               

               Cow position:
               chr29:42406693-42406838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               99-298
               

               Cow position:
               chr29:2730286-2730083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               99-298
               

               Cow position:
               chr29:19420613-19420422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               99-299
               

               Cow position:
               chr29:26411469-26411271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               41, 105
               

               Conread position:
               99-327
               

               Cow position:
               chr29:39534668-39534440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 97
               

               Conread position:
               100-199
               

               Cow position:
               chr29:39285496-39285596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               100-251
               

               Cow position:
               chr29:5043381-5043533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               100-294
               

               Cow position:
               chr29:41422906-41422715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               100-308
               

               Cow position:
               chr29:19187027-19187234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               40, 130
               

               Conread position:
               100-315
               

               Cow position:
               chr29:22735447-22735234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               100-315
               

               Cow position:
               chr29:26211053-26211268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               100-325
               

               Cow position:
               chr29:28087670-28087899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               8, 125
               

               Conread position:
               100-328
               

               Cow position:
               chr29:25793147-25793370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               100-331
               

               Cow position:
               chr29:8047023-8046792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               169, 24
               

               Conread position:
               101-298
               

               Cow position:
               chr29:9078527-9078332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 153
               

               Conread position:
               102-285
               

               Cow position:
               chr29:8001424-8001252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               102-298
               

               Cow position:
               chr29:43088314-43088504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               102-319
               

               Cow position:
               chr29:24026697-24026925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               103-313
               

               Cow position:
               chr29:685169-684966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               103-324
               

               Cow position:
               chr29:31658729-31658516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               103-327
               

               Cow position:
               chr29:1959941-1959727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               104-275
               

               Cow position:
               chr29:11116656-11116488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               104-327
               

               Cow position:
               chr29:8629094-8628869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               104-334
               

               Cow position:
               chr29:31497139-31497375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               105-294
               

               Cow position:
               chr29:26539241-26539425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               27, 98
               

               Conread position:
               105-298
               

               Cow position:
               chr29:32215713-32215902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               105-322
               

               Cow position:
               chr29:29187950-29187731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               106-258
               

               Cow position:
               chr29:40916815-40916965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               106-334
               

               Cow position:
               chr29:23142327-23142099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               106-351
               

               Cow position:
               chr29:4648202-4647967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               38, 100
               

               Conread position:
               107-232
               

               Cow position:
               chr29:26764374-26764494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               107-268
               

               Cow position:
               chr29:42865567-42865728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               107-275
               

               Cow position:
               chr29:30742595-30742764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               107-320
               

               Cow position:
               chr29:8704460-8704240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               108-322
               

               Cow position:
               chr29:9800659-9800879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               109-298
               

               Cow position:
               chr29:4484110-4484295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               109-327
               

               Cow position:
               chr29:35737317-35737093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               33, 167
               

               Conread position:
               110-321
               

               Cow position:
               chr29:4327604-4327803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               111-229
               

               Cow position:
               chr29:20604623-20604506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 105
               

               Conread position:
               111-232
               

               Cow position:
               chr29:32301763-32301883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               111-266
               

               Cow position:
               chr29:27042288-27042442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               111-283
               

               Cow position:
               chr29:33393690-33393871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               111-298
               

               Cow position:
               chr29:20685181-20685369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               111-315
               

               Cow position:
               chr29:34669055-34668850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               111-316
               

               Cow position:
               chr29:14756329-14756125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               111-317
               

               Cow position:
               chr29:8799003-8798794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 175
               

               Conread position:
               112-274
               

               Cow position:
               chr29:735609-735772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               112-320
               

               Cow position:
               chr29:14746793-14746999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               112-321
               

               Cow position:
               chr29:30021132-30021343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               112-323
               

               Cow position:
               chr29:13558346-13558560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               112-325
               

               Cow position:
               chr29:34675996-34675782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               29, 137
               

               Conread position:
               112-333
               

               Cow position:
               chr29:3662120-3661894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               113-284
               

               Cow position:
               chr29:22127884-22128048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               114-321
               

               Cow position:
               chr29:23954645-23954851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 190
               

               Conread position:
               115-223
               

               Cow position:
               chr29:1402782-1402894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               115-231
               

               Cow position:
               chr29:26942926-26943042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               115-232
               

               Cow position:
               chr29:17022166-17022284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               115-232
               

               Cow position:
               chr29:29940656-29940774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               115-257
               

               Cow position:
               chr29:5652956-5653099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               115-282
               

               Cow position:
               chr29:19665958-19665790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               115-291
               

               Cow position:
               chr29:934941-935118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               115-294
               

               Cow position:
               chr29:3538660-3538491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               115-311
               

               Cow position:
               chr29:22577163-22576967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               26, 96
               

               Conread position:
               115-316
               

               Cow position:
               chr29:19061758-19061546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               115-321
               

               Cow position:
               chr29:28948990-28949204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               110, 195
               

               Conread position:
               115-321
               

               Cow position:
               chr29:41014581-41014790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               115-325
               

               Cow position:
               chr29:25432470-25432679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               115-331
               

               Cow position:
               chr29:40351059-40350851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               115-360
               

               Cow position:
               chr29:30681168-30681412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 204
               

               Conread position:
               116-284
               

               Cow position:
               chr29:23991813-23991645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               116-295
               

               Cow position:
               chr29:40763677-40763501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               116-298
               

               Cow position:
               chr29:20177687-20177492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               116-298
               

               Cow position:
               chr29:24614362-24614546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               116-298
               

               Cow position:
               chr29:34274359-34274176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               116-306
               

               Cow position:
               chr29:44901646-44901455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               116-317
               

               Cow position:
               chr29:25288906-25288701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               116-325
               

               Cow position:
               chr29:5740269-5740063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               116-329
               

               Cow position:
               chr29:22019171-22018958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               116-330
               

               Cow position:
               chr29:27487201-27487413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               117-298
               

               Cow position:
               chr29:28715215-28715033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               117-310
               

               Cow position:
               chr29:36697775-36697966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 145
               

               Conread position:
               118-295
               

               Cow position:
               chr29:10203791-10203964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               118-298
               

               Cow position:
               chr29:37771867-37771687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               118-308
               

               Cow position:
               chr29:44895383-44895192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               118-315
               

               Cow position:
               chr29:20575598-20575401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               119-223
               

               Cow position:
               chr29:28242321-28242218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               119-312
               

               Cow position:
               chr29:26631061-26631262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               120-287
               

               Cow position:
               chr29:22335208-22335038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               120-331
               

               Cow position:
               chr29:11685185-11685398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 191
               

               Conread position:
               120-333
               

               Cow position:
               chr29:11894719-11894927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               20, 181
               

               Conread position:
               120-334
               

               Cow position:
               chr29:35189628-35189841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               20, 191
               

               Conread position:
               120-349
               

               Cow position:
               chr29:16735245-16735479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               122-323
               

               Cow position:
               chr29:30089032-30088831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               123-225
               

               Cow position:
               chr29:22818798-22818903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               123-295
               

               Cow position:
               chr29:42404971-42405144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               123-316
               

               Cow position:
               chr29:936231-936420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               124-298
               

               Cow position:
               chr29:22652348-22652517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               125-265
               

               Cow position:
               chr29:28279261-28279120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               125-292
               

               Cow position:
               chr29:10192013-10191853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               125-294
               

               Cow position:
               chr29:11081370-11081200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               125-294
               

               Cow position:
               chr29:30743690-30743516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               125-322
               

               Cow position:
               chr29:29152267-29152065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               126-275
               

               Cow position:
               chr29:28257168-28257317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               126-298
               

               Cow position:
               chr29:27997223-27997050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               127-258
               

               Cow position:
               chr29:13091439-13091310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               127-287
               

               Cow position:
               chr29:17663733-17663571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 130
               

               Conread position:
               127-316
               

               Cow position:
               chr29:33005012-33005201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               164, 16
               

               Conread position:
               128-320
               

               Cow position:
               chr29:8605906-8605718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 115
               

               Conread position:
               128-330
               

               Cow position:
               chr29:29265053-29264848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               129-324
               

               Cow position:
               chr29:38732183-38732375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               129-330
               

               Cow position:
               chr29:16536923-16536720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               132-267
               

               Cow position:
               chr29:29447414-29447551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 88
               

               Conread position:
               132-287
               

               Cow position:
               chr29:33143321-33143169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 95
               

               Conread position:
               132-292
               

               Cow position:
               chr29:25907279-25907444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               132-295
               

               Cow position:
               chr29:23678742-23678896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               132-313
               

               Cow position:
               chr29:41094152-41094332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               171, 11
               

               Conread position:
               132-334
               

               Cow position:
               chr29:13063892-13064088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 84
               

               Conread position:
               133-305
               

               Cow position:
               chr29:7414535-7414699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               133-315
               

               Cow position:
               chr29:2414718-2414541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 143
               

               Conread position:
               133-317
               

               Cow position:
               chr29:2219421-2219606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 82
               

               Conread position:
               133-317
               

               Cow position:
               chr29:38775654-38775832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               133-332
               

               Cow position:
               chr29:14828194-14827992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               7, 59
               

               Conread position:
               134-357
               

               Cow position:
               chr29:6517264-6517488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 41
               

               Conread position:
               136-258
               

               Cow position:
               chr29:18605622-18605501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               137-305
               

               Cow position:
               chr29:20976378-20976555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               138-295
               

               Cow position:
               chr29:16561730-16561579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               138-298
               

               Cow position:
               chr29:7040832-7040670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               139-298
               

               Cow position:
               chr29:24604937-24605094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               139-311
               

               Cow position:
               chr29:22776120-22776288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               150, 72
               

               Conread position:
               139-314
               

               Cow position:
               chr29:16438738-16438558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               139-324
               

               Cow position:
               chr29:30123463-30123279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               140-286
               

               Cow position:
               chr29:30920361-30920214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               141-282
               

               Cow position:
               chr29:36546739-36546600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               141-320
               

               Cow position:
               chr29:22447914-22448094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               141-328
               

               Cow position:
               chr29:40112425-40112608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               155, 64
               

               Conread position:
               142-334
               

               Cow position:
               chr29:3192871-3192688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               143-295
               

               Cow position:
               chr29:23735043-23734891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-286
               

               Cow position:
               chr29:7143342-7143485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               146-298
               

               Cow position:
               chr29:10994560-10994709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               147-256
               

               Cow position:
               chr29:18211740-18211631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               147-327
               

               Cow position:
               chr29:24119451-24119272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               148-329
               

               Cow position:
               chr29:6441628-6441806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               166, 71
               

               Conread position:
               149-295
               

               Cow position:
               chr29:18577497-18577637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               150-324
               

               Cow position:
               chr29:35281516-35281696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               153-298
               

               Cow position:
               chr29:8841390-8841251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               155-298
               

               Cow position:
               chr29:4741334-4741191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-319
               

               Cow position:
               chr29:14614979-14614817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               147, 89
               

               Conread position:
               161-320
               

               Cow position:
               chr29:34483565-34483405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               161-329
               

               Cow position:
               chr29:4603078-4602898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               162-350
               

               Cow position:
               chr29:16164372-16164187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               163-327
               

               Cow position:
               chr29:20643980-20644142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 113
               

               Conread position:
               168-315
               

               Cow position:
               chr29:6515502-6515648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               169-315
               

               Cow position:
               chr29:774059-774204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               171-330
               

               Cow position:
               chr29:26777081-26777240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-316
               

               Cow position:
               chr29:31835347-31835484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               174-285
               

               Cow position:
               chr29:5218007-5217895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               174-286
               

               Cow position:
               chr29:35663843-35663730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               174-329
               

               Cow position:
               chr29:23209402-23209558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               277-690
               

               Cow position:
               chr29:13044991-13044566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               333-600
               

               Cow position:
               chr29:34807239-34807516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               350-691
               

               Cow position:
               chr29:17407852-17408215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               372-593
               

               Cow position:
               chr29:6215829-6216060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               372-597
               

               Cow position:
               chr29:253647-253887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               372-692
               

               Cow position:
               chr29:23755088-23754748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               374-691
               

               Cow position:
               chr29:17153003-17153328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               159, 77
               

               Conread position:
               375-693
               

               Cow position:
               chr29:2429852-2430178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               119, 131
               

               Conread position:
               375-696
               

               Cow position:
               chr29:32893473-32893802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               117, 134
               

               Conread position:
               376-696
               

               Cow position:
               chr29:107800-108124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               156, 64
               

               Conread position:
               377-593
               

               Cow position:
               chr29:41184270-41184047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               162, 131
               

               Conread position:
               377-598
               

               Cow position:
               chr29:32515071-32515300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               155, 131
               

               Conread position:
               377-598
               

               Cow position:
               chr29:42256232-42256004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               155, 131
               

               Conread position:
               377-696
               

               Cow position:
               chr29:19525543-19525201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               155, 131
               

               Conread position:
               382-696
               

               Cow position:
               chr29:35002906-35002569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               150, 122
               

               Conread position:
               383-593
               

               Cow position:
               chr29:2886907-2886699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               383-691
               

               Cow position:
               chr29:28657618-28657285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               116, 127
               

               Conread position:
               383-696
               

               Cow position:
               chr29:31764792-31765128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               149, 125
               

               Conread position:
               388-565
               

               Cow position:
               chr29:40619092-40618913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-587
               

               Cow position:
               chr29:43255649-43255446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               153, 91
               

               Conread position:
               388-591
               

               Cow position:
               chr29:24668278-24668482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               163, 65
               

               Conread position:
               388-593
               

               Cow position:
               chr29:9639792-9639578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 126
               

               Conread position:
               388-593
               

               Cow position:
               chr29:13612095-13611883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               146, 124
               

               Conread position:
               388-593
               

               Cow position:
               chr29:13850128-13849915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               388-593
               

               Cow position:
               chr29:27813165-27813377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               388-598
               

               Cow position:
               chr29:666650-666433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr29:5426670-5426452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               110, 121
               

               Conread position:
               388-598
               

               Cow position:
               chr29:13899423-13899641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               101, 121
               

               Conread position:
               388-598
               

               Cow position:
               chr29:39424381-39424164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-663
               

               Cow position:
               chr29:15623945-15623645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               85, 123
               

               Conread position:
               388-680
               

               Cow position:
               chr29:13076145-13076444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 84
               

               Conread position:
               388-687
               

               Cow position:
               chr29:6872797-6872474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               144, 62
               

               Conread position:
               388-687
               

               Cow position:
               chr29:7847146-7847468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-687
               

               Cow position:
               chr29:32556987-32556665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 120
               

               Conread position:
               388-688
               

               Cow position:
               chr29:9080035-9079720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               388-688
               

               Cow position:
               chr29:16064468-16064791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-689
               

               Cow position:
               chr29:6263250-6262927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               151, 118
               

               Conread position:
               388-691
               

               Cow position:
               chr29:607880-607554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:1478209-1478535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               388-691
               

               Cow position:
               chr29:3711779-3712100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 80
               

               Conread position:
               388-691
               

               Cow position:
               chr29:13584973-13585299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               85, 121
               

               Conread position:
               388-691
               

               Cow position:
               chr29:15966796-15966471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               388-691
               

               Cow position:
               chr29:16036657-16036334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               144, 91
               

               Conread position:
               388-691
               

               Cow position:
               chr29:21226734-21227059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:21430100-21429777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               164, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:22745657-22745983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:29600421-29600100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               124, 247
               

               Conread position:
               388-691
               

               Cow position:
               chr29:31094829-31094503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               146, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:31123608-31123282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               151, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:31184133-31184459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:32289148-32289474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               151, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:32291357-32291676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               144, 66
               

               Conread position:
               388-691
               

               Cow position:
               chr29:32352375-32352701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:34524565-34524239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:35299677-35300002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:35956547-35956219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               85, 121
               

               Conread position:
               388-691
               

               Cow position:
               chr29:40294089-40294390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr29:40471422-40471748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-693
               

               Cow position:
               chr29:29702616-29702317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               211, 9
               

               Conread position:
               388-693
               

               Cow position:
               chr29:32962072-32962399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               388-696
               

               Cow position:
               chr29:10845712-10846044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               389-585
               

               Cow position:
               chr29:25929761-25929558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-591
               

               Cow position:
               chr29:11474955-11475164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               150, 119
               

               Conread position:
               389-592
               

               Cow position:
               chr29:7428357-7428145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               389-593
               

               Cow position:
               chr29:2299558-2299347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               143, 115
               

               Conread position:
               389-593
               

               Cow position:
               chr29:2464113-2463901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 118
               

               Conread position:
               389-593
               

               Cow position:
               chr29:2693203-2693414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-593
               

               Cow position:
               chr29:14208798-14208587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-593
               

               Cow position:
               chr29:19620510-19620299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-593
               

               Cow position:
               chr29:21254716-21254920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               145, 95
               

               Conread position:
               389-593
               

               Cow position:
               chr29:26162077-26161868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-688
               

               Cow position:
               chr29:23979469-23979791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-691
               

               Cow position:
               chr29:408504-408181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-691
               

               Cow position:
               chr29:726487-726812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               389-691
               

               Cow position:
               chr29:5240150-5240477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 119
               

               Conread position:
               389-691
               

               Cow position:
               chr29:14082148-14081824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               144, 112
               

               Conread position:
               389-692
               

               Cow position:
               chr29:42806749-42807075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               144, 119
               

               Conread position:
               389-696
               

               Cow position:
               chr29:1577212-1576889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               163, 137
               

               Conread position:
               389-696
               

               Cow position:
               chr29:2102605-2102935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr29:4200150-4200466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               70, 113
               

               Conread position:
               389-696
               

               Cow position:
               chr29:6934249-6934580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               389-696
               

               Cow position:
               chr29:7812436-7812109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               389-696
               

               Cow position:
               chr29:8624438-8624108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr29:10820957-10820627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr29:16346964-16347294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr29:19515586-19515256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               143, 116
               

               Conread position:
               389-696
               

               Cow position:
               chr29:19656658-19656988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr29:20253928-20254255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               150, 35
               

               Conread position:
               389-696
               

               Cow position:
               chr29:22279133-22279462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 65
               

               Conread position:
               389-696
               

               Cow position:
               chr29:28697620-28697290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr29:45207270-45207599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               144, 117
               

               Conread position:
               390-593
               

               Cow position:
               chr29:5979968-5979757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               142, 16
               

               Conread position:
               390-593
               

               Cow position:
               chr29:43326259-43326480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 127
               

               Conread position:
               390-597
               

               Cow position:
               chr29:34795100-34794890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               170, 89
               

               Conread position:
               390-673
               

               Cow position:
               chr29:17137873-17138167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               208, 63
               

               Conread position:
               390-687
               

               Cow position:
               chr29:45626102-45626422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 114
               

               Conread position:
               390-688
               

               Cow position:
               chr29:35274264-35273959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               144, 94
               

               Conread position:
               390-689
               

               Cow position:
               chr29:45701-45380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               144, 118
               

               Conread position:
               390-691
               

               Cow position:
               chr29:10644652-10644328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               390-691
               

               Cow position:
               chr29:34737932-34737610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 118
               

               Conread position:
               390-693
               

               Cow position:
               chr29:5960595-5960918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 116
               

               Conread position:
               390-696
               

               Cow position:
               chr29:10453056-10452727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               142, 116
               

               Conread position:
               390-696
               

               Cow position:
               chr29:39076957-39076630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               142, 27
               

               Conread position:
               391-592
               

               Cow position:
               chr29:13019445-13019653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               148, 115
               

               Conread position:
               391-603
               

               Cow position:
               chr29:3172204-3171985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               391-683
               

               Cow position:
               chr29:32542896-32543212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 115
               

               Conread position:
               391-688
               

               Cow position:
               chr29:15995622-15995302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               142, 115
               

               Conread position:
               391-688
               

               Cow position:
               chr29:16596381-16596696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               157, 9
               

               Conread position:
               391-696
               

               Cow position:
               chr29:2838576-2838248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 103
               

               Conread position:
               391-696
               

               Cow position:
               chr29:45461993-45462321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               141, 117
               

               Conread position:
               392-591
               

               Cow position:
               chr29:10248918-10248716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 55
               

               Conread position:
               392-673
               

               Cow position:
               chr29:9330678-9330982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 87
               

               Conread position:
               392-691
               

               Cow position:
               chr29:579126-578825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               162, 48
               

               Conread position:
               395-688
               

               Cow position:
               chr29:6219027-6218726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               137, 5
               

               Conread position:
               396-693
               

               Cow position:
               chr29:2483673-2483993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               136, 112
               

               Conread position:
               397-584
               

               Cow position:
               chr29:34331781-34331588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               135, 87
               

               Conread position:
               397-593
               

               Cow position:
               chr29:40500224-40500026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               398-584
               

               Cow position:
               chr29:15942268-15942074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 55
               

               Conread position:
               399-693
               

               Cow position:
               chr29:18523662-18523343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               400-688
               

               Cow position:
               chr29:30412491-30412794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               160, 108
               

               Conread position:
               400-691
               

               Cow position:
               chr29:15943120-15943436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               403-598
               

               Cow position:
               chr29:19890327-19890529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               407-593
               

               Cow position:
               chr29:34538464-34538271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               410-691
               

               Cow position:
               chr29:21473928-21474232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 98
               
Show alignments to all cow chromosomes.
Conread position:	7-326
Cow position:	chr29:414722-415043 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	201
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	38, 135
Conread position:	12-223
Cow position:	chr29:32926011-32926230 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	166
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	11, 0
Conread position:	12-268
Cow position:	chr29:30548689-30548944 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	178
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	62, 53
Conread position:	13-200
Cow position:	chr29:18012471-18012660 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	143
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	56, 0
Conread position:	13-222
Cow position:	chr29:17409252-17409459 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	166
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	127, 41
Conread position:	13-231
Cow position:	chr29:26991160-26991375 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	151
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	143, 114
Conread position:	13-237
Cow position:	chr29:26995179-26995394 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	154
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	82, 0
Conread position:	13-298
Cow position:	chr29:1306945-1306665 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	193
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	32, 86
Conread position:	13-316
Cow position:	chr29:23844748-23845057 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	223
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	15, 51
Conread position:	13-331
Cow position:	chr29:3584194-3583887 (view UCSC Genome Browser custom track)
Alignm length:	319
Alignm identity:	212
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	45, 0
Conread position:	14-141
Cow position:	chr29:12004843-12004720 (view UCSC Genome Browser custom track)
Alignm length:	128
Alignm identity:	105
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	51, 0
Conread position:	14-148
Cow position:	chr29:25839612-25839750 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	112
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	51, 0
Conread position:	14-155
Cow position:	chr29:17301447-17301591 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	112
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	50, 0
Conread position:	14-173
Cow position:	chr29:17192-17037 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	122
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	62, 25
Conread position:	14-187
Cow position:	chr29:868693-868864 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	139
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	42, 49
Conread position:	14-195
Cow position:	chr29:23984040-23983858 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	129
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	59, 39
Conread position:	14-197
Cow position:	chr29:9638399-9638221 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	137
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	126, 44
Conread position:	14-198
Cow position:	chr29:2984806-2984990 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	137
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	0, 0
Conread position:	14-200
Cow position:	chr29:27329810-27329994 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	133
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	126, 54
Conread position:	14-201
Cow position:	chr29:12626061-12625873 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	147
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	15, 26