Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056C10.5
        

               Conread position:
               7-230
               

               Cow position:
               chr5:56339080-56338861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               7-305
               

               Cow position:
               chr5:65967797-65967504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               9-285
               

               Cow position:
               chr5:66466259-66466526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               132, 7
               

               Conread position:
               11-189
               

               Cow position:
               chr5:9390487-9390676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               11-298
               

               Cow position:
               chr5:43923216-43922945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               53, 125
               

               Conread position:
               13-231
               

               Cow position:
               chr5:23168885-23168665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               13-236
               

               Cow position:
               chr5:24175311-24175536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               13-314
               

               Cow position:
               chr5:63114533-63114225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               13-315
               

               Cow position:
               chr5:41303145-41302832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               14-123
               

               Cow position:
               chr5:24485492-24485382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-129
               

               Cow position:
               chr5:32956151-32956036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-129
               

               Cow position:
               chr5:54713786-54713673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-136
               

               Cow position:
               chr5:21964232-21964354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               14-137
               

               Cow position:
               chr5:29980042-29979916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-158
               

               Cow position:
               chr5:41951149-41951008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               14-167
               

               Cow position:
               chr5:40039825-40039669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               14-169
               

               Cow position:
               chr5:34192846-34193005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               14-173
               

               Cow position:
               chr5:4617312-4617469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               14-178
               

               Cow position:
               chr5:11965384-11965222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               14-186
               

               Cow position:
               chr5:55928886-55929060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 153
               

               Conread position:
               14-189
               

               Cow position:
               chr5:58793664-58793488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               14-191
               

               Cow position:
               chr5:52645134-52644959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               14-192
               

               Cow position:
               chr5:65883828-65883651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               125, 44
               

               Conread position:
               14-196
               

               Cow position:
               chr5:65588648-65588827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               14-197
               

               Cow position:
               chr5:26150476-26150294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               14-197
               

               Cow position:
               chr5:42744733-42744907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               14-197
               

               Cow position:
               chr5:63964221-63964038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               125, 17
               

               Conread position:
               14-200
               

               Cow position:
               chr5:15598288-15598108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               14-201
               

               Cow position:
               chr5:1461032-1461220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               14-201
               

               Cow position:
               chr5:50821727-50821914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 70
               

               Conread position:
               14-205
               

               Cow position:
               chr5:28927644-28927458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 117
               

               Conread position:
               14-205
               

               Cow position:
               chr5:52000167-52000353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               14-206
               

               Cow position:
               chr5:58856049-58856238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-206
               

               Cow position:
               chr5:62142615-62142812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               14-209
               

               Cow position:
               chr5:359997-359800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 49
               

               Conread position:
               14-209
               

               Cow position:
               chr5:18898923-18899112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               14-209
               

               Cow position:
               chr5:22643280-22643093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               14-209
               

               Cow position:
               chr5:27411452-27411262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               125, 51
               

               Conread position:
               14-209
               

               Cow position:
               chr5:29515551-29515366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               14-209
               

               Cow position:
               chr5:35785036-35784850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               14-209
               

               Cow position:
               chr5:39258461-39258644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               14-209
               

               Cow position:
               chr5:41713242-41713438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               14-209
               

               Cow position:
               chr5:56680194-56680395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               14-212
               

               Cow position:
               chr5:14473468-14473261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               14-212
               

               Cow position:
               chr5:57737049-57737241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               14-213
               

               Cow position:
               chr5:29771461-29771671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-213
               

               Cow position:
               chr5:47323410-47323605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               14-213
               

               Cow position:
               chr5:59325890-59325698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               14-214
               

               Cow position:
               chr5:72564707-72564908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               14-214
               

               Cow position:
               chr5:75436942-75436745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               125, 54
               

               Conread position:
               14-217
               

               Cow position:
               chr5:29844224-29844428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               124, 51
               

               Conread position:
               14-217
               

               Cow position:
               chr5:56524114-56524321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-217
               

               Cow position:
               chr5:57640023-57639828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               125, 58
               

               Conread position:
               14-220
               

               Cow position:
               chr5:28302802-28302593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               14-221
               

               Cow position:
               chr5:7697950-7698151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               130, 44
               

               Conread position:
               14-221
               

               Cow position:
               chr5:35125998-35126206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               14-223
               

               Cow position:
               chr5:36855150-36855359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               100, 51
               

               Conread position:
               14-223
               

               Cow position:
               chr5:41545949-41545740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 36
               

               Conread position:
               14-223
               

               Cow position:
               chr5:62378736-62378933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 40
               

               Conread position:
               14-224
               

               Cow position:
               chr5:23529335-23529128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               14-224
               

               Cow position:
               chr5:68330043-68329833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               14-225
               

               Cow position:
               chr5:50533442-50533233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 118
               

               Conread position:
               14-225
               

               Cow position:
               chr5:63987506-63987290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               14-225
               

               Cow position:
               chr5:64592149-64591940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               129, 14
               

               Conread position:
               14-229
               

               Cow position:
               chr5:67212301-67212519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 181
               

               Conread position:
               14-230
               

               Cow position:
               chr5:1087252-1087042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               14-230
               

               Cow position:
               chr5:43929792-43929578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 7
               

               Conread position:
               14-232
               

               Cow position:
               chr5:16206210-16205993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               14-232
               

               Cow position:
               chr5:30949971-30949751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 17
               

               Conread position:
               14-232
               

               Cow position:
               chr5:34300861-34301078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 114
               

               Conread position:
               14-232
               

               Cow position:
               chr5:37808724-37808502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               14-232
               

               Cow position:
               chr5:43992267-43992486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               14-232
               

               Cow position:
               chr5:45420189-45419977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               14-232
               

               Cow position:
               chr5:54060222-54060438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               14-232
               

               Cow position:
               chr5:54767964-54767747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               14-232
               

               Cow position:
               chr5:55019240-55019453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               14-232
               

               Cow position:
               chr5:56317242-56317451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-232
               

               Cow position:
               chr5:59873146-59872918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-233
               

               Cow position:
               chr5:60715413-60715205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               14-234
               

               Cow position:
               chr5:34528500-34528709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               174, 30
               

               Conread position:
               14-237
               

               Cow position:
               chr5:7723611-7723830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               14-237
               

               Cow position:
               chr5:17028038-17028262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               118, 214
               

               Conread position:
               14-237
               

               Cow position:
               chr5:27102849-27102627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               14-237
               

               Cow position:
               chr5:27419784-27419562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               14-237
               

               Cow position:
               chr5:28946117-28945893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 105
               

               Conread position:
               14-248
               

               Cow position:
               chr5:54375562-54375325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               14-252
               

               Cow position:
               chr5:7193365-7193593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               14-258
               

               Cow position:
               chr5:66366452-66366695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               53, 201
               

               Conread position:
               14-264
               

               Cow position:
               chr5:60183746-60183992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               101, 200
               

               Conread position:
               14-275
               

               Cow position:
               chr5:57419846-57419593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 17
               

               Conread position:
               14-275
               

               Cow position:
               chr5:64697730-64697991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               210, 44
               

               Conread position:
               14-281
               

               Cow position:
               chr5:35826548-35826807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               14-281
               

               Cow position:
               chr5:59330803-59330530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               39, 199
               

               Conread position:
               14-284
               

               Cow position:
               chr5:37646019-37646287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               14-286
               

               Cow position:
               chr5:34109114-34108843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               126, 50
               

               Conread position:
               14-286
               

               Cow position:
               chr5:45397517-45397779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-286
               

               Cow position:
               chr5:53946840-53947113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               14-286
               

               Cow position:
               chr5:63234881-63234609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 97
               

               Conread position:
               14-287
               

               Cow position:
               chr5:17555087-17554820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               14-288
               

               Cow position:
               chr5:6503938-6503660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               14-290
               

               Cow position:
               chr5:58144656-58144386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 44
               

               Conread position:
               14-292
               

               Cow position:
               chr5:42845652-42845377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 217
               

               Conread position:
               14-292
               

               Cow position:
               chr5:55966934-55966652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               14-292
               

               Cow position:
               chr5:74643726-74643464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 46
               

               Conread position:
               14-293
               

               Cow position:
               chr5:68604803-68605084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               14-294
               

               Cow position:
               chr5:9894184-9893903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 196
               

               Conread position:
               14-294
               

               Cow position:
               chr5:21617402-21617677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               127, 36
               

               Conread position:
               14-294
               

               Cow position:
               chr5:35684881-35685155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               187, 123
               

               Conread position:
               14-294
               

               Cow position:
               chr5:41884881-41885136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               14-294
               

               Cow position:
               chr5:42050496-42050766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               14-294
               

               Cow position:
               chr5:42670918-42670651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               14-294
               

               Cow position:
               chr5:49474604-49474332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 184
               

               Conread position:
               14-294
               

               Cow position:
               chr5:57935164-57934898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               14-294
               

               Cow position:
               chr5:74858517-74858809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 265
               

               Conread position:
               14-295
               

               Cow position:
               chr5:3771793-3772065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 87
               

               Conread position:
               14-295
               

               Cow position:
               chr5:7012903-7012626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               14-295
               

               Cow position:
               chr5:19278755-19278480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               14-295
               

               Cow position:
               chr5:30253686-30253963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 47
               

               Conread position:
               14-295
               

               Cow position:
               chr5:39447591-39447302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               14-295
               

               Cow position:
               chr5:44848075-44847804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               102, 48
               

               Conread position:
               14-295
               

               Cow position:
               chr5:57756086-57755811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               14-295
               

               Cow position:
               chr5:62172359-62172621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               14-297
               

               Cow position:
               chr5:67932519-67932241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               14-298
               

               Cow position:
               chr5:5855808-5856086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               14-298
               

               Cow position:
               chr5:7044762-7044480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               14-298
               

               Cow position:
               chr5:7057455-7057171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 45
               

               Conread position:
               14-298
               

               Cow position:
               chr5:11769213-11769498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               14-298
               

               Cow position:
               chr5:14904127-14903840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 243
               

               Conread position:
               14-298
               

               Cow position:
               chr5:15479069-15479355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 166
               

               Conread position:
               14-298
               

               Cow position:
               chr5:16179580-16179297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               14-298
               

               Cow position:
               chr5:18574118-18574408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 130
               

               Conread position:
               14-298
               

               Cow position:
               chr5:26467568-26467853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 201
               

               Conread position:
               14-298
               

               Cow position:
               chr5:30302838-30303107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               14-298
               

               Cow position:
               chr5:32339019-32338735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               14-298
               

               Cow position:
               chr5:41165031-41165308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               14-298
               

               Cow position:
               chr5:43402845-43403135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 183
               

               Conread position:
               14-298
               

               Cow position:
               chr5:43604088-43604365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               14-298
               

               Cow position:
               chr5:45845747-45845464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               14-298
               

               Cow position:
               chr5:47871098-47870828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               14-298
               

               Cow position:
               chr5:52165233-52164947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 54
               

               Conread position:
               14-298
               

               Cow position:
               chr5:55955852-55956136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 58
               

               Conread position:
               14-298
               

               Cow position:
               chr5:61455790-61456074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               14-298
               

               Cow position:
               chr5:62870097-62869837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               14-298
               

               Cow position:
               chr5:64321697-64321988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               14-299
               

               Cow position:
               chr5:26990337-26990614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               14-305
               

               Cow position:
               chr5:35459351-35459063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 206
               

               Conread position:
               14-305
               

               Cow position:
               chr5:53835658-53835956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               14-306
               

               Cow position:
               chr5:61725913-61726191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               129, 17
               

               Conread position:
               14-311
               

               Cow position:
               chr5:47601764-47602046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               14-312
               

               Cow position:
               chr5:34561957-34562250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 193
               

               Conread position:
               14-312
               

               Cow position:
               chr5:57526973-57526687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 74
               

               Conread position:
               14-314
               

               Cow position:
               chr5:21828811-21829104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               125, 148
               

               Conread position:
               14-314
               

               Cow position:
               chr5:24996278-24995979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               14-314
               

               Cow position:
               chr5:59082250-59081949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               14-315
               

               Cow position:
               chr5:45225879-45225581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               14-316
               

               Cow position:
               chr5:42064148-42064450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 291
               

               Conread position:
               14-317
               

               Cow position:
               chr5:35208208-35208507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               14-317
               

               Cow position:
               chr5:59627029-59626727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 175
               

               Conread position:
               14-319
               

               Cow position:
               chr5:35247165-35246859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               14-320
               

               Cow position:
               chr5:44446923-44446629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 203
               

               Conread position:
               14-320
               

               Cow position:
               chr5:63627580-63627290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               288, 30
               

               Conread position:
               14-323
               

               Cow position:
               chr5:52729072-52728760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               14-324
               

               Cow position:
               chr5:4280393-4280696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 43
               

               Conread position:
               14-324
               

               Cow position:
               chr5:19335839-19335523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               14-325
               

               Cow position:
               chr5:29097312-29097615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               14-326
               

               Cow position:
               chr5:11427290-11426982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               14-326
               

               Cow position:
               chr5:35235764-35235434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 301
               

               Conread position:
               14-327
               

               Cow position:
               chr5:43371250-43370936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               14-329
               

               Cow position:
               chr5:46512818-46512511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               14-329
               

               Cow position:
               chr5:66581910-66582223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 44
               

               Conread position:
               14-330
               

               Cow position:
               chr5:57074388-57074081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               14-331
               

               Cow position:
               chr5:20995150-20994827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 244
               

               Conread position:
               14-335
               

               Cow position:
               chr5:12673523-12673219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-343
               

               Cow position:
               chr5:55176835-55177148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               14-346
               

               Cow position:
               chr5:60952600-60952936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               14-347
               

               Cow position:
               chr5:26262729-26262411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               224, 21
               

               Conread position:
               15-201
               

               Cow position:
               chr5:64758825-64758636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               15-209
               

               Cow position:
               chr5:41452722-41452533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 113
               

               Conread position:
               15-231
               

               Cow position:
               chr5:34887254-34887034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               15-232
               

               Cow position:
               chr5:46509921-46509702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               15-283
               

               Cow position:
               chr5:60016113-60016375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               15-285
               

               Cow position:
               chr5:16893827-16893565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 181
               

               Conread position:
               15-287
               

               Cow position:
               chr5:64523921-64523649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               15-295
               

               Cow position:
               chr5:14314471-14314739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               15-298
               

               Cow position:
               chr5:14345149-14344870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               15-298
               

               Cow position:
               chr5:34624903-34625174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               118, 183
               

               Conread position:
               15-298
               

               Cow position:
               chr5:53842229-53842517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               15-298
               

               Cow position:
               chr5:66257584-66257860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               15-298
               

               Cow position:
               chr5:72895633-72895912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               126, 13
               

               Conread position:
               15-317
               

               Cow position:
               chr5:17999546-17999251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               15-321
               

               Cow position:
               chr5:11668239-11667937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               15-322
               

               Cow position:
               chr5:32153370-32153060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               15-323
               

               Cow position:
               chr5:53055617-53055308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 297
               

               Conread position:
               16-138
               

               Cow position:
               chr5:2500237-2500112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               16-142
               

               Cow position:
               chr5:34107183-34107307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               16-147
               

               Cow position:
               chr5:21920322-21920457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 113
               

               Conread position:
               16-165
               

               Cow position:
               chr5:73080147-73080300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               16-166
               

               Cow position:
               chr5:56820315-56820168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               16-168
               

               Cow position:
               chr5:16509043-16509204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               16-188
               

               Cow position:
               chr5:61840139-61840310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               123, 46
               

               Conread position:
               16-189
               

               Cow position:
               chr5:56635848-56636014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               123, 12
               

               Conread position:
               16-200
               

               Cow position:
               chr5:19813276-19813090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               16-201
               

               Cow position:
               chr5:29903571-29903392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               16-213
               

               Cow position:
               chr5:3639539-3639354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               16-213
               

               Cow position:
               chr5:28224401-28224595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               16-214
               

               Cow position:
               chr5:65887059-65886867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               16-217
               

               Cow position:
               chr5:36255314-36255110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               16-220
               

               Cow position:
               chr5:34463637-34463431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               46, 160
               

               Conread position:
               16-220
               

               Cow position:
               chr5:49685323-49685127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               16-221
               

               Cow position:
               chr5:38689596-38689388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 177
               

               Conread position:
               16-221
               

               Cow position:
               chr5:50215608-50215413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               16-222
               

               Cow position:
               chr5:37190148-37189945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               125, 44
               

               Conread position:
               16-225
               

               Cow position:
               chr5:4032045-4031831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               16-225
               

               Cow position:
               chr5:4220931-4221132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               16-228
               

               Cow position:
               chr5:59115334-59115539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               197, 48
               

               Conread position:
               16-229
               

               Cow position:
               chr5:3204784-3204985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               122, 37
               

               Conread position:
               16-232
               

               Cow position:
               chr5:9090073-9089866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               16-232
               

               Cow position:
               chr5:13717620-13717408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               16-232
               

               Cow position:
               chr5:40559584-40559795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               124, 47
               

               Conread position:
               16-232
               

               Cow position:
               chr5:53855645-53855868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               16-232
               

               Cow position:
               chr5:63427060-63426844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               16-236
               

               Cow position:
               chr5:51935139-51935355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               16-237
               

               Cow position:
               chr5:19523847-19524067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 38
               

               Conread position:
               16-242
               

               Cow position:
               chr5:53710743-53710519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 39
               

               Conread position:
               16-243
               

               Cow position:
               chr5:63059016-63059237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               16-248
               

               Cow position:
               chr5:22188610-22188848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               100, 178
               

               Conread position:
               16-258
               

               Cow position:
               chr5:28248120-28248361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               124, 39
               

               Conread position:
               16-258
               

               Cow position:
               chr5:71494767-71495008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               16-261
               

               Cow position:
               chr5:30805115-30805347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               16-269
               

               Cow position:
               chr5:68872141-68872392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               121, 34
               

               Conread position:
               16-273
               

               Cow position:
               chr5:12247799-12247540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 158
               

               Conread position:
               16-273
               

               Cow position:
               chr5:47704179-47703924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               16-274
               

               Cow position:
               chr5:55796014-55795768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 13
               

               Conread position:
               16-274
               

               Cow position:
               chr5:64137201-64137460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               16-280
               

               Cow position:
               chr5:64168290-64168029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               16-280
               

               Cow position:
               chr5:65752804-65753068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 175
               

               Conread position:
               16-284
               

               Cow position:
               chr5:29353187-29352920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               42, 181
               

               Conread position:
               16-284
               

               Cow position:
               chr5:34050063-34050320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               71, 42
               

               Conread position:
               16-285
               

               Cow position:
               chr5:3002864-3003119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               16-285
               

               Cow position:
               chr5:33414462-33414195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               185, 48
               

               Conread position:
               16-285
               

               Cow position:
               chr5:66815623-66815378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               16-287
               

               Cow position:
               chr5:17063143-17062864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               16-287
               

               Cow position:
               chr5:56070803-56071073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 197
               

               Conread position:
               16-287
               

               Cow position:
               chr5:57156367-57156085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               16-291
               

               Cow position:
               chr5:57327744-57328016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               16-293
               

               Cow position:
               chr5:65776435-65776156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               124, 38
               

               Conread position:
               16-294
               

               Cow position:
               chr5:8024248-8023993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               16-294
               

               Cow position:
               chr5:12557345-12557065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               55, 203
               

               Conread position:
               16-294
               

               Cow position:
               chr5:16214631-16214903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               56, 200
               

               Conread position:
               16-294
               

               Cow position:
               chr5:19752252-19752523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               16-294
               

               Cow position:
               chr5:29827996-29828270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               16-294
               

               Cow position:
               chr5:43858486-43858196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               16-294
               

               Cow position:
               chr5:55756478-55756191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               16-294
               

               Cow position:
               chr5:65941303-65941028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               16-295
               

               Cow position:
               chr5:32975604-32975335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               16-295
               

               Cow position:
               chr5:40109438-40109707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               16-295
               

               Cow position:
               chr5:47317024-47316752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               16-296
               

               Cow position:
               chr5:11540100-11539828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               124, 38
               

               Conread position:
               16-298
               

               Cow position:
               chr5:58987-58704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               16-298
               

               Cow position:
               chr5:12901864-12902145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               16-298
               

               Cow position:
               chr5:17087075-17086791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               16-298
               

               Cow position:
               chr5:24136660-24136960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               16-298
               

               Cow position:
               chr5:31475631-31475910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               16-298
               

               Cow position:
               chr5:34976896-34976613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               16-298
               

               Cow position:
               chr5:36650497-36650781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               114, 47
               

               Conread position:
               16-298
               

               Cow position:
               chr5:37646599-37646327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               16-298
               

               Cow position:
               chr5:47756722-47756998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               16-298
               

               Cow position:
               chr5:50575732-50575994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               16-298
               

               Cow position:
               chr5:52831413-52831704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               16-298
               

               Cow position:
               chr5:55068653-55068926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               123, 40
               

               Conread position:
               16-298
               

               Cow position:
               chr5:61771061-61771348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               16-298
               

               Cow position:
               chr5:61912365-61912066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               16-298
               

               Cow position:
               chr5:62107544-62107257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 47
               

               Conread position:
               16-298
               

               Cow position:
               chr5:66972375-66972656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 42
               

               Conread position:
               16-298
               

               Cow position:
               chr5:71845970-71845700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               16-298
               

               Cow position:
               chr5:73168054-73167789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 47
               

               Conread position:
               16-299
               

               Cow position:
               chr5:12434480-12434762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 208
               

               Conread position:
               16-301
               

               Cow position:
               chr5:30629211-30628924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               16-305
               

               Cow position:
               chr5:3281781-3282070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               122, 43
               

               Conread position:
               16-305
               

               Cow position:
               chr5:19796919-19797219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 142
               

               Conread position:
               16-310
               

               Cow position:
               chr5:30487184-30487464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               16-311
               

               Cow position:
               chr5:19778632-19778327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               16-311
               

               Cow position:
               chr5:37893280-37893584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               16-314
               

               Cow position:
               chr5:57768034-57767748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 48
               

               Conread position:
               16-315
               

               Cow position:
               chr5:56136974-56136677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               126, 134
               

               Conread position:
               16-315
               

               Cow position:
               chr5:63240923-63241223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 42
               

               Conread position:
               16-315
               

               Cow position:
               chr5:73167180-73166895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               16-316
               

               Cow position:
               chr5:18289077-18289362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 52
               

               Conread position:
               16-316
               

               Cow position:
               chr5:24349055-24349360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               16-316
               

               Cow position:
               chr5:39937053-39937359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 105
               

               Conread position:
               16-316
               

               Cow position:
               chr5:53825187-53824870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               16-317
               

               Cow position:
               chr5:44049648-44049947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               16-317
               

               Cow position:
               chr5:61576491-61576793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               16-319
               

               Cow position:
               chr5:72903282-72902995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               16-320
               

               Cow position:
               chr5:45409269-45409574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               124, 42
               

               Conread position:
               16-322
               

               Cow position:
               chr5:27179607-27179915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               16-322
               

               Cow position:
               chr5:30178560-30178250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               16-322
               

               Cow position:
               chr5:51053703-51053400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               16-323
               

               Cow position:
               chr5:14550634-14550332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 42
               

               Conread position:
               16-323
               

               Cow position:
               chr5:44796784-44796489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               16-323
               

               Cow position:
               chr5:50857883-50858183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               118, 54
               

               Conread position:
               16-324
               

               Cow position:
               chr5:64555476-64555784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               124, 38
               

               Conread position:
               16-325
               

               Cow position:
               chr5:1247210-1247516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 117
               

               Conread position:
               16-326
               

               Cow position:
               chr5:1688166-1687861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               16-326
               

               Cow position:
               chr5:57591640-57591940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               16-327
               

               Cow position:
               chr5:5111128-5110805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               16-330
               

               Cow position:
               chr5:37941842-37941552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               16-334
               

               Cow position:
               chr5:34505980-34505659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               54, 12
               

               Conread position:
               16-335
               

               Cow position:
               chr5:50713824-50713490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 302
               

               Conread position:
               16-342
               

               Cow position:
               chr5:74610745-74610422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               280, 37
               

               Conread position:
               16-345
               

               Cow position:
               chr5:71723015-71723350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 202
               

               Conread position:
               16-347
               

               Cow position:
               chr5:40152425-40152763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               16-349
               

               Cow position:
               chr5:20843453-20843120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               16-349
               

               Cow position:
               chr5:63831874-63832194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               16-358
               

               Cow position:
               chr5:458438-458788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               16-358
               

               Cow position:
               chr5:59057802-59057464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               17-186
               

               Cow position:
               chr5:31481094-31481264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               17-213
               

               Cow position:
               chr5:38076539-38076340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               17-237
               

               Cow position:
               chr5:39875073-39875291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               17-282
               

               Cow position:
               chr5:37894940-37895205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               17-305
               

               Cow position:
               chr5:33833992-33834273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 38
               

               Conread position:
               17-305
               

               Cow position:
               chr5:64140481-64140771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 199
               

               Conread position:
               17-315
               

               Cow position:
               chr5:49919871-49920167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               17-316
               

               Cow position:
               chr5:57393354-57393058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               17-326
               

               Cow position:
               chr5:57265957-57265645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               18-167
               

               Cow position:
               chr5:69520840-69520988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               18-190
               

               Cow position:
               chr5:32696874-32696703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               18-197
               

               Cow position:
               chr5:22445863-22446038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               18-212
               

               Cow position:
               chr5:28035690-28035884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 175
               

               Conread position:
               18-214
               

               Cow position:
               chr5:14629864-14629661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               18-222
               

               Cow position:
               chr5:45574564-45574772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               18-223
               

               Cow position:
               chr5:54311284-54311489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               122, 50
               

               Conread position:
               18-237
               

               Cow position:
               chr5:58320520-58320304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               18-287
               

               Cow position:
               chr5:30845062-30845321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               18-317
               

               Cow position:
               chr5:30418923-30419220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               18-318
               

               Cow position:
               chr5:37255389-37255086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               18-329
               

               Cow position:
               chr5:36039057-36038749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               19-193
               

               Cow position:
               chr5:23357286-23357452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               19-225
               

               Cow position:
               chr5:21040023-21039830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               19-298
               

               Cow position:
               chr5:15470882-15471144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               19-329
               

               Cow position:
               chr5:74658613-74658921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               20-181
               

               Cow position:
               chr5:57561471-57561634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               20-222
               

               Cow position:
               chr5:41294032-41294233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               20-224
               

               Cow position:
               chr5:67118369-67118574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               20-237
               

               Cow position:
               chr5:6528626-6528852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               25, 216
               

               Conread position:
               20-292
               

               Cow position:
               chr5:57994916-57994660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               20-298
               

               Cow position:
               chr5:20128005-20128280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               20-298
               

               Cow position:
               chr5:33560782-33560512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               20-317
               

               Cow position:
               chr5:5938276-5938576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               120, 34
               

               Conread position:
               20-324
               

               Cow position:
               chr5:52052505-52052210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               20-345
               

               Cow position:
               chr5:65140243-65140569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               21-239
               

               Cow position:
               chr5:58490669-58490902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               21-325
               

               Cow position:
               chr5:25366043-25366351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               22-143
               

               Cow position:
               chr5:12566787-12566668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               22-206
               

               Cow position:
               chr5:67243872-67244054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               22-212
               

               Cow position:
               chr5:27188078-27188257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               22-213
               

               Cow position:
               chr5:65601408-65601599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               22-222
               

               Cow position:
               chr5:45273547-45273350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               22-223
               

               Cow position:
               chr5:12866865-12866675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               22-232
               

               Cow position:
               chr5:26477067-26476856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               22-240
               

               Cow position:
               chr5:26094217-26093996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 146
               

               Conread position:
               22-275
               

               Cow position:
               chr5:48829110-48829358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               117, 36
               

               Conread position:
               22-294
               

               Cow position:
               chr5:35969486-35969762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               22-317
               

               Cow position:
               chr5:1987559-1987859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 168
               

               Conread position:
               22-321
               

               Cow position:
               chr5:63647521-63647229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               22-351
               

               Cow position:
               chr5:15363833-15364149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               23-213
               

               Cow position:
               chr5:54086497-54086681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               23-284
               

               Cow position:
               chr5:26097249-26097502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               23-292
               

               Cow position:
               chr5:61784774-61784505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               24-266
               

               Cow position:
               chr5:453514-453745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 39
               

               Conread position:
               24-286
               

               Cow position:
               chr5:49501870-49501604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               26-232
               

               Cow position:
               chr5:41981327-41981530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 101
               

               Conread position:
               29-275
               

               Cow position:
               chr5:23912242-23911995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               30-237
               

               Cow position:
               chr5:34914594-34914385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 199
               

               Conread position:
               30-295
               

               Cow position:
               chr5:54875739-54875470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               31-209
               

               Cow position:
               chr5:46322835-46322664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 16
               

               Conread position:
               31-213
               

               Cow position:
               chr5:36838919-36839102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               22, 162
               

               Conread position:
               31-232
               

               Cow position:
               chr5:58446768-58446970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               109, 32
               

               Conread position:
               31-267
               

               Cow position:
               chr5:61007026-61007262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               31-275
               

               Cow position:
               chr5:50482902-50482655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               31-293
               

               Cow position:
               chr5:22667039-22667291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               108, 30
               

               Conread position:
               31-295
               

               Cow position:
               chr5:30247558-30247302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               31-317
               

               Cow position:
               chr5:50101416-50101133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 190
               

               Conread position:
               32-172
               

               Cow position:
               chr5:45148400-45148268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               32-178
               

               Cow position:
               chr5:31918608-31918750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               32-201
               

               Cow position:
               chr5:40237176-40237342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               32-205
               

               Cow position:
               chr5:27306266-27306439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               32-209
               

               Cow position:
               chr5:2851551-2851729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               32-209
               

               Cow position:
               chr5:56153577-56153754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               32-209
               

               Cow position:
               chr5:56517065-56517243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               32-209
               

               Cow position:
               chr5:60747315-60747142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               32-217
               

               Cow position:
               chr5:57101819-57101636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               32-218
               

               Cow position:
               chr5:69731466-69731648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               32-219
               

               Cow position:
               chr5:35982778-35982586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               32-232
               

               Cow position:
               chr5:23678739-23678541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               32-234
               

               Cow position:
               chr5:44752354-44752143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               32-292
               

               Cow position:
               chr5:20779433-20779178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               32-295
               

               Cow position:
               chr5:29060958-29060716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               32-304
               

               Cow position:
               chr5:47696481-47696227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               32-316
               

               Cow position:
               chr5:50723012-50723289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               32-317
               

               Cow position:
               chr5:22242813-22242532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               26, 193
               

               Conread position:
               32-317
               

               Cow position:
               chr5:68537704-68537417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               32-323
               

               Cow position:
               chr5:16025498-16025233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               126, 26
               

               Conread position:
               32-323
               

               Cow position:
               chr5:44994079-44993792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               32-327
               

               Cow position:
               chr5:70678677-70678392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 31
               

               Conread position:
               32-332
               

               Cow position:
               chr5:56014692-56014981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               106, 180
               

               Conread position:
               32-345
               

               Cow position:
               chr5:6444188-6443868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               33-193
               

               Cow position:
               chr5:32673098-32672944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               33-271
               

               Cow position:
               chr5:54350399-54350172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 182
               

               Conread position:
               33-273
               

               Cow position:
               chr5:57686777-57686540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               35, 185
               

               Conread position:
               33-298
               

               Cow position:
               chr5:32394564-32394828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               34-194
               

               Cow position:
               chr5:29371453-29371614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               34-225
               

               Cow position:
               chr5:61102679-61102871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               34-232
               

               Cow position:
               chr5:22795178-22795376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               34-232
               

               Cow position:
               chr5:55061890-55062088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 173
               

               Conread position:
               34-235
               

               Cow position:
               chr5:72006528-72006324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               34-248
               

               Cow position:
               chr5:52083301-52083519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               34-252
               

               Cow position:
               chr5:69461295-69461515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               34-275
               

               Cow position:
               chr5:60741209-60741448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               106, 16
               

               Conread position:
               34-287
               

               Cow position:
               chr5:20288299-20288043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               34-289
               

               Cow position:
               chr5:66551934-66551675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               34-295
               

               Cow position:
               chr5:69337788-69338037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               34-298
               

               Cow position:
               chr5:51065496-51065742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               34-311
               

               Cow position:
               chr5:63192777-63192515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               34-315
               

               Cow position:
               chr5:44028340-44028068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               34-320
               

               Cow position:
               chr5:38068701-38068415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               34-322
               

               Cow position:
               chr5:41935688-41935409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 99
               

               Conread position:
               34-323
               

               Cow position:
               chr5:52001656-52001372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               34-337
               

               Cow position:
               chr5:59395622-59395930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               35-252
               

               Cow position:
               chr5:17602235-17602025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               35-295
               

               Cow position:
               chr5:30232871-30233133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 141
               

               Conread position:
               35-321
               

               Cow position:
               chr5:62811789-62812074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               35-322
               

               Cow position:
               chr5:60210178-60209897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               36-209
               

               Cow position:
               chr5:76366327-76366156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               36-232
               

               Cow position:
               chr5:56211868-56212070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               36-254
               

               Cow position:
               chr5:3588993-3589211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               36-293
               

               Cow position:
               chr5:37983130-37983392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               36-295
               

               Cow position:
               chr5:69099685-69099942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               36-298
               

               Cow position:
               chr5:26549175-26548917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               107, 176
               

               Conread position:
               36-311
               

               Cow position:
               chr5:33273657-33273937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               37-317
               

               Cow position:
               chr5:32935710-32935994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               37-327
               

               Cow position:
               chr5:270134-269843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               37-328
               

               Cow position:
               chr5:38833089-38833368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               38-298
               

               Cow position:
               chr5:12322838-12322585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 94
               

               Conread position:
               39-200
               

               Cow position:
               chr5:45574398-45574235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               39-229
               

               Cow position:
               chr5:38739429-38739246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               39-326
               

               Cow position:
               chr5:65760565-65760278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               8, 49
               

               Conread position:
               40-197
               

               Cow position:
               chr5:60188960-60189120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               40-298
               

               Cow position:
               chr5:52108296-52108032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               40-326
               

               Cow position:
               chr5:65883657-65883370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               100, 266
               

               Conread position:
               41-222
               

               Cow position:
               chr5:57489973-57489799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               42-220
               

               Cow position:
               chr5:56287529-56287352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               44-232
               

               Cow position:
               chr5:57230365-57230175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               44-233
               

               Cow position:
               chr5:61875517-61875700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               44-243
               

               Cow position:
               chr5:56011102-56011302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               44-286
               

               Cow position:
               chr5:35123541-35123307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               44-294
               

               Cow position:
               chr5:5257323-5257065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               14, 185
               

               Conread position:
               44-298
               

               Cow position:
               chr5:23208930-23209185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               44-298
               

               Cow position:
               chr5:46672180-46672440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               44-314
               

               Cow position:
               chr5:57101551-57101286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               44-317
               

               Cow position:
               chr5:2309582-2309313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               45-298
               

               Cow position:
               chr5:58437220-58437473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               46-232
               

               Cow position:
               chr5:60908640-60908826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               46-292
               

               Cow position:
               chr5:49342074-49341815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               47-189
               

               Cow position:
               chr5:62415986-62415842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               47-281
               

               Cow position:
               chr5:58555112-58555365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               47-298
               

               Cow position:
               chr5:34347751-34347507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               47-305
               

               Cow position:
               chr5:45187142-45186882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 125
               

               Conread position:
               48-262
               

               Cow position:
               chr5:7770878-7771100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               48-316
               

               Cow position:
               chr5:57371775-57372048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               49-211
               

               Cow position:
               chr5:28230143-28230305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               49-281
               

               Cow position:
               chr5:25597816-25598038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               50-321
               

               Cow position:
               chr5:15364246-15364518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               51-201
               

               Cow position:
               chr5:43844684-43844532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               51-275
               

               Cow position:
               chr5:37713675-37713449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               51-298
               

               Cow position:
               chr5:51298731-51298489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               52-202
               

               Cow position:
               chr5:23527648-23527498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 11
               

               Conread position:
               52-225
               

               Cow position:
               chr5:57150644-57150822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               52-324
               

               Cow position:
               chr5:5760333-5760057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 115
               

               Conread position:
               52-335
               

               Cow position:
               chr5:37266059-37265774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               53-295
               

               Cow position:
               chr5:14920946-14920703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               53-298
               

               Cow position:
               chr5:17104833-17105071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               6, 86
               

               Conread position:
               53-314
               

               Cow position:
               chr5:16938039-16937791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               54-218
               

               Cow position:
               chr5:68264975-68264810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               54-225
               

               Cow position:
               chr5:40356866-40356703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 106
               

               Conread position:
               54-329
               

               Cow position:
               chr5:67679162-67679438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               55-217
               

               Cow position:
               chr5:1739576-1739737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               55-231
               

               Cow position:
               chr5:17724234-17724056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               55-286
               

               Cow position:
               chr5:30266903-30266671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               55-287
               

               Cow position:
               chr5:22091786-22091545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               55-298
               

               Cow position:
               chr5:56222561-56222310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               55-314
               

               Cow position:
               chr5:873024-873285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               85, 183
               

               Conread position:
               55-323
               

               Cow position:
               chr5:35229153-35228895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 10
               

               Conread position:
               55-323
               

               Cow position:
               chr5:36868721-36868989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 112
               

               Conread position:
               56-295
               

               Cow position:
               chr5:12761133-12760897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 122
               

               Conread position:
               57-315
               

               Cow position:
               chr5:23678947-23679206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               58-202
               

               Cow position:
               chr5:20595451-20595597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 115
               

               Conread position:
               58-305
               

               Cow position:
               chr5:35319575-35319327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               58-315
               

               Cow position:
               chr5:59372460-59372717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               205, 79
               

               Conread position:
               59-298
               

               Cow position:
               chr5:59627086-59627318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 159
               

               Conread position:
               59-311
               

               Cow position:
               chr5:17566450-17566204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               59-321
               

               Cow position:
               chr5:52852959-52853216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 157
               

               Conread position:
               60-212
               

               Cow position:
               chr5:63656464-63656621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               60-285
               

               Cow position:
               chr5:50600036-50600259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               60-294
               

               Cow position:
               chr5:43846385-43846156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               61-193
               

               Cow position:
               chr5:41129732-41129865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               61-200
               

               Cow position:
               chr5:19251568-19251710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               62-228
               

               Cow position:
               chr5:24946231-24946398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               62-298
               

               Cow position:
               chr5:65343613-65343855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               62-315
               

               Cow position:
               chr5:59631464-59631731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               62-322
               

               Cow position:
               chr5:4226338-4226605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               77, 134
               

               Conread position:
               62-322
               

               Cow position:
               chr5:40889306-40889044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               62-323
               

               Cow position:
               chr5:4120015-4120274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               25, 241
               

               Conread position:
               62-329
               

               Cow position:
               chr5:26370674-26370942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               77, 118
               

               Conread position:
               63-219
               

               Cow position:
               chr5:9233997-9233839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               63-232
               

               Cow position:
               chr5:27293892-27293725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 153
               

               Conread position:
               63-293
               

               Cow position:
               chr5:56860439-56860664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               168, 78
               

               Conread position:
               63-298
               

               Cow position:
               chr5:55783959-55783735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               63-317
               

               Cow position:
               chr5:4322396-4322660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               77, 150
               

               Conread position:
               63-320
               

               Cow position:
               chr5:6520003-6520253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               72, 122
               

               Conread position:
               63-335
               

               Cow position:
               chr5:57279376-57279648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               77, 215
               

               Conread position:
               64-237
               

               Cow position:
               chr5:33661839-33662013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               64-295
               

               Cow position:
               chr5:55259402-55259631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 134
               

               Conread position:
               64-298
               

               Cow position:
               chr5:31096810-31096576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               64-298
               

               Cow position:
               chr5:33918712-33918477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               64-319
               

               Cow position:
               chr5:31469600-31469343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               64-321
               

               Cow position:
               chr5:69333492-69333750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 251
               

               Conread position:
               64-323
               

               Cow position:
               chr5:29468289-29468028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               10, 157
               

               Conread position:
               64-325
               

               Cow position:
               chr5:28330351-28330087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               64-326
               

               Cow position:
               chr5:5751618-5751350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 256
               

               Conread position:
               64-327
               

               Cow position:
               chr5:17835165-17834902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               76, 104
               

               Conread position:
               64-332
               

               Cow position:
               chr5:18702227-18701966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 108
               

               Conread position:
               65-193
               

               Cow position:
               chr5:67540208-67540077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               65-208
               

               Cow position:
               chr5:50526256-50526400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               65-214
               

               Cow position:
               chr5:12556313-12556462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               65-287
               

               Cow position:
               chr5:69033226-69033008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               71, 101
               

               Conread position:
               65-294
               

               Cow position:
               chr5:60523726-60523949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               65-298
               

               Cow position:
               chr5:29829901-29829661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               65-314
               

               Cow position:
               chr5:58737764-58737513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               66-225
               

               Cow position:
               chr5:43457537-43457376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               66-295
               

               Cow position:
               chr5:53935552-53935331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               66-295
               

               Cow position:
               chr5:73253406-73253628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               66-305
               

               Cow position:
               chr5:46681729-46681490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               5, 126
               

               Conread position:
               66-317
               

               Cow position:
               chr5:2827369-2827620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 204
               

               Conread position:
               67-186
               

               Cow position:
               chr5:57736698-57736583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               67-282
               

               Cow position:
               chr5:44054056-44053836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               69, 21
               

               Conread position:
               68-201
               

               Cow position:
               chr5:15426536-15426669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               68-222
               

               Cow position:
               chr5:56334511-56334360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               68-223
               

               Cow position:
               chr5:33155812-33155968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               68-225
               

               Cow position:
               chr5:24069387-24069540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               68-228
               

               Cow position:
               chr5:9369273-9369113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               68-232
               

               Cow position:
               chr5:51490248-51490085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               68-232
               

               Cow position:
               chr5:55129340-55129505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               68-240
               

               Cow position:
               chr5:34884825-34884646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               68-247
               

               Cow position:
               chr5:57787799-57787983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 133
               

               Conread position:
               68-251
               

               Cow position:
               chr5:61492090-61492277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               68-252
               

               Cow position:
               chr5:64139557-64139738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 144
               

               Conread position:
               68-258
               

               Cow position:
               chr5:50871809-50872007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               68-275
               

               Cow position:
               chr5:64027022-64026812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               68-281
               

               Cow position:
               chr5:16939597-16939383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               68-281
               

               Cow position:
               chr5:35513212-35513430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 164
               

               Conread position:
               68-284
               

               Cow position:
               chr5:45706032-45706248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               68-290
               

               Cow position:
               chr5:30561929-30562146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 150
               

               Conread position:
               68-293
               

               Cow position:
               chr5:25020770-25020535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               74, 110
               

               Conread position:
               68-295
               

               Cow position:
               chr5:22608640-22608862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               68-295
               

               Cow position:
               chr5:30276687-30276910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               71, 146
               

               Conread position:
               68-298
               

               Cow position:
               chr5:44028757-44028526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               68-298
               

               Cow position:
               chr5:51555084-51554859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 64
               

               Conread position:
               68-298
               

               Cow position:
               chr5:56028542-56028319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               68-298
               

               Cow position:
               chr5:61414343-61414574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               68-298
               

               Cow position:
               chr5:71015893-71015659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               8, 174
               

               Conread position:
               68-309
               

               Cow position:
               chr5:69383252-69383489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               71, 124
               

               Conread position:
               68-311
               

               Cow position:
               chr5:15115900-15116146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               30, 193
               

               Conread position:
               68-311
               

               Cow position:
               chr5:21525157-21525400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               68-314
               

               Cow position:
               chr5:57062532-57062286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 139
               

               Conread position:
               68-314
               

               Cow position:
               chr5:59384690-59384446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               73, 36
               

               Conread position:
               68-323
               

               Cow position:
               chr5:45405034-45405295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               7, 238
               

               Conread position:
               68-328
               

               Cow position:
               chr5:58519419-58519161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 203
               

               Conread position:
               68-329
               

               Cow position:
               chr5:38853345-38853608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               19, 248
               

               Conread position:
               68-329
               

               Cow position:
               chr5:65679973-65679718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               195, 66
               

               Conread position:
               68-330
               

               Cow position:
               chr5:58215953-58216215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 191
               

               Conread position:
               68-331
               

               Cow position:
               chr5:50824589-50824843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 144
               

               Conread position:
               68-331
               

               Cow position:
               chr5:55965897-55965629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               68-331
               

               Cow position:
               chr5:60515031-60514772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               68-332
               

               Cow position:
               chr5:26133100-26132833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               68-333
               

               Cow position:
               chr5:46541058-46540797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               68-334
               

               Cow position:
               chr5:61600405-61600668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               68-352
               

               Cow position:
               chr5:18513709-18513424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               72, 58
               

               Conread position:
               68-353
               

               Cow position:
               chr5:5201898-5202183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 266
               

               Conread position:
               69-208
               

               Cow position:
               chr5:72006865-72006727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               69-214
               

               Cow position:
               chr5:45126649-45126796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               69-221
               

               Cow position:
               chr5:9170583-9170433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               69-230
               

               Cow position:
               chr5:56467689-56467850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               69-232
               

               Cow position:
               chr5:56428313-56428154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               69-237
               

               Cow position:
               chr5:6033434-6033603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               69-272
               

               Cow position:
               chr5:17384152-17383954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               69-286
               

               Cow position:
               chr5:35397503-35397718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 103
               

               Conread position:
               69-290
               

               Cow position:
               chr5:38717308-38717513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               69-292
               

               Cow position:
               chr5:29144192-29143964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 67
               

               Conread position:
               69-298
               

               Cow position:
               chr5:2469209-2468987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               69-298
               

               Cow position:
               chr5:6439023-6438800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               69-298
               

               Cow position:
               chr5:67634519-67634282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               69-305
               

               Cow position:
               chr5:5089722-5089491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               70, 89
               

               Conread position:
               69-315
               

               Cow position:
               chr5:6839086-6838837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               47, 187
               

               Conread position:
               69-315
               

               Cow position:
               chr5:61999559-61999312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               69-316
               

               Cow position:
               chr5:40170427-40170173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               69-319
               

               Cow position:
               chr5:48867756-48867500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 154
               

               Conread position:
               69-322
               

               Cow position:
               chr5:6126837-6127082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               69-323
               

               Cow position:
               chr5:2423288-2423035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               69-326
               

               Cow position:
               chr5:54750813-54751065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               69-328
               

               Cow position:
               chr5:39035778-39036038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               75, 121
               

               Conread position:
               69-334
               

               Cow position:
               chr5:48867466-48867206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               69-335
               

               Cow position:
               chr5:35989755-35990025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 80
               

               Conread position:
               69-357
               

               Cow position:
               chr5:34915055-34914765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               72, 158
               

               Conread position:
               70-193
               

               Cow position:
               chr5:55350913-55350786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               70-251
               

               Cow position:
               chr5:11289394-11289209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               70-286
               

               Cow position:
               chr5:65552709-65552507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               70-286
               

               Cow position:
               chr5:69751388-69751171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               70-296
               

               Cow position:
               chr5:18062320-18062086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               70-306
               

               Cow position:
               chr5:46023065-46022824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               70-311
               

               Cow position:
               chr5:61914562-61914810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               70-315
               

               Cow position:
               chr5:67672222-67672474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               70-322
               

               Cow position:
               chr5:56613565-56613314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 162
               

               Conread position:
               71-169
               

               Cow position:
               chr5:14742214-14742313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               71-232
               

               Cow position:
               chr5:4166642-4166802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               71-245
               

               Cow position:
               chr5:44874193-44874365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 110
               

               Conread position:
               71-282
               

               Cow position:
               chr5:46080143-46079929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 94
               

               Conread position:
               71-287
               

               Cow position:
               chr5:52137935-52138153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               45, 177
               

               Conread position:
               71-293
               

               Cow position:
               chr5:72045674-72045456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               71-294
               

               Cow position:
               chr5:4267670-4267882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               69, 138
               

               Conread position:
               71-294
               

               Cow position:
               chr5:44163369-44163151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               71-295
               

               Cow position:
               chr5:64176126-64175907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               73, 152
               

               Conread position:
               71-306
               

               Cow position:
               chr5:46129669-46129433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               71-321
               

               Cow position:
               chr5:61049332-61049581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 230
               

               Conread position:
               72-225
               

               Cow position:
               chr5:4710150-4709997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               72-286
               

               Cow position:
               chr5:52723578-52723789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               72-295
               

               Cow position:
               chr5:44810238-44810014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               72-297
               

               Cow position:
               chr5:48918811-48919023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               72-311
               

               Cow position:
               chr5:7646716-7646956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 200
               

               Conread position:
               72-321
               

               Cow position:
               chr5:7409953-7410194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               69, 95
               

               Conread position:
               72-321
               

               Cow position:
               chr5:60422969-60422719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 193
               

               Conread position:
               72-328
               

               Cow position:
               chr5:1104878-1104617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               73-284
               

               Cow position:
               chr5:36142989-36143190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               68, 49
               

               Conread position:
               73-292
               

               Cow position:
               chr5:60175481-60175706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               73-305
               

               Cow position:
               chr5:22565621-22565852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 169
               

               Conread position:
               73-305
               

               Cow position:
               chr5:36624250-36624484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               73-314
               

               Cow position:
               chr5:55072086-55071841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 137
               

               Conread position:
               73-314
               

               Cow position:
               chr5:56072159-56071905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 245
               

               Conread position:
               73-318
               

               Cow position:
               chr5:52040321-52040070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               73-324
               

               Cow position:
               chr5:12299913-12300158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               73-326
               

               Cow position:
               chr5:50943153-50942903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               73-329
               

               Cow position:
               chr5:11562721-11562467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               73-345
               

               Cow position:
               chr5:12873753-12874025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               67, 131
               

               Conread position:
               73-360
               

               Cow position:
               chr5:28814945-28814662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               74-232
               

               Cow position:
               chr5:44726331-44726173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               74-282
               

               Cow position:
               chr5:52778556-52778354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               74-286
               

               Cow position:
               chr5:39146980-39146767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               74-286
               

               Cow position:
               chr5:51920291-51920504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               74-298
               

               Cow position:
               chr5:991467-991700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               66, 169
               

               Conread position:
               74-317
               

               Cow position:
               chr5:5016432-5016668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               74-331
               

               Cow position:
               chr5:64798876-64798622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               8, 148
               

               Conread position:
               75-232
               

               Cow position:
               chr5:28017126-28017288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 150
               

               Conread position:
               75-268
               

               Cow position:
               chr5:38168898-38169089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               75-285
               

               Cow position:
               chr5:3743326-3743539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               75-311
               

               Cow position:
               chr5:71158277-71158041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 144
               

               Conread position:
               75-321
               

               Cow position:
               chr5:64060450-64060693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               69, 138
               

               Conread position:
               76-213
               

               Cow position:
               chr5:1396605-1396742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               64, 120
               

               Conread position:
               76-332
               

               Cow position:
               chr5:27099365-27099607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               77-317
               

               Cow position:
               chr5:52137048-52136806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               78-213
               

               Cow position:
               chr5:26723455-26723590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               78-228
               

               Cow position:
               chr5:56361803-56361949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               78-300
               

               Cow position:
               chr5:60948140-60948361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               78-317
               

               Cow position:
               chr5:60908355-60908596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               78-324
               

               Cow position:
               chr5:17828472-17828230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 223
               

               Conread position:
               79-213
               

               Cow position:
               chr5:20211970-20212103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               79-242
               

               Cow position:
               chr5:25730488-25730659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               79-323
               

               Cow position:
               chr5:26497669-26497439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 107
               

               Conread position:
               79-325
               

               Cow position:
               chr5:56549372-56549619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               28, 227
               

               Conread position:
               80-222
               

               Cow position:
               chr5:65050202-65050059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               80-294
               

               Cow position:
               chr5:44722504-44722291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               80-298
               

               Cow position:
               chr5:44196920-44196704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 127
               

               Conread position:
               80-306
               

               Cow position:
               chr5:25035245-25035020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               144, 23
               

               Conread position:
               80-349
               

               Cow position:
               chr5:742740-743008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               60, 39
               

               Conread position:
               80-357
               

               Cow position:
               chr5:2240980-2240710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               81-267
               

               Cow position:
               chr5:51247121-51246937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 124
               

               Conread position:
               81-298
               

               Cow position:
               chr5:55166729-55166946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 87
               

               Conread position:
               81-315
               

               Cow position:
               chr5:70505549-70505793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               84-232
               

               Cow position:
               chr5:12738542-12738394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               84-232
               

               Cow position:
               chr5:35647356-35647505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               84-284
               

               Cow position:
               chr5:4506952-4506751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               84-287
               

               Cow position:
               chr5:55942366-55942162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               84-295
               

               Cow position:
               chr5:65080449-65080660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               84-310
               

               Cow position:
               chr5:64116117-64116341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               84-316
               

               Cow position:
               chr5:24615334-24615101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               84-316
               

               Cow position:
               chr5:28681504-28681271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               56, 128
               

               Conread position:
               84-323
               

               Cow position:
               chr5:33482734-33482963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               84-349
               

               Cow position:
               chr5:60212597-60212864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               38, 258
               

               Conread position:
               85-298
               

               Cow position:
               chr5:3492194-3492411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               85-298
               

               Cow position:
               chr5:3582574-3582781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 115
               

               Conread position:
               85-332
               

               Cow position:
               chr5:51539137-51539384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 206
               

               Conread position:
               86-287
               

               Cow position:
               chr5:47743643-47743836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               86-298
               

               Cow position:
               chr5:6544121-6543908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               86-314
               

               Cow position:
               chr5:26147606-26147827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               86-315
               

               Cow position:
               chr5:7177166-7177395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 138
               

               Conread position:
               87-248
               

               Cow position:
               chr5:5847829-5847662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               87-316
               

               Cow position:
               chr5:26167437-26167666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 128
               

               Conread position:
               88-222
               

               Cow position:
               chr5:49260019-49259887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               88-323
               

               Cow position:
               chr5:42321223-42320996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               210, 46
               

               Conread position:
               88-324
               

               Cow position:
               chr5:19811549-19811768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               89-295
               

               Cow position:
               chr5:66659527-66659737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               89-312
               

               Cow position:
               chr5:54312619-54312841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               50, 128
               

               Conread position:
               89-320
               

               Cow position:
               chr5:49407375-49407146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 110
               

               Conread position:
               89-331
               

               Cow position:
               chr5:13957042-13957286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 227
               

               Conread position:
               90-223
               

               Cow position:
               chr5:54436775-54436906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               90-286
               

               Cow position:
               chr5:72167482-72167284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               90-294
               

               Cow position:
               chr5:74039984-74039784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               90-298
               

               Cow position:
               chr5:57825155-57825364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               90-307
               

               Cow position:
               chr5:57687567-57687346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 217
               

               Conread position:
               91-287
               

               Cow position:
               chr5:6695565-6695764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 92
               

               Conread position:
               92-284
               

               Cow position:
               chr5:38040543-38040356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               92-285
               

               Cow position:
               chr5:51233998-51233811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               92-298
               

               Cow position:
               chr5:18295460-18295663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 169
               

               Conread position:
               92-309
               

               Cow position:
               chr5:46063518-46063730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               92-317
               

               Cow position:
               chr5:56494282-56494049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               92-336
               

               Cow position:
               chr5:17826205-17826452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               93-223
               

               Cow position:
               chr5:38382777-38382647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 106
               

               Conread position:
               93-298
               

               Cow position:
               chr5:35190132-35190332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 123
               

               Conread position:
               93-305
               

               Cow position:
               chr5:14167863-14168078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               93-321
               

               Cow position:
               chr5:67463005-67463234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 125
               

               Conread position:
               93-325
               

               Cow position:
               chr5:56871893-56871664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               94-273
               

               Cow position:
               chr5:42288682-42288862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-293
               

               Cow position:
               chr5:69766004-69765813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-295
               

               Cow position:
               chr5:37842256-37842056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               94-310
               

               Cow position:
               chr5:57497404-57497188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               94-321
               

               Cow position:
               chr5:51289568-51289357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               95-294
               

               Cow position:
               chr5:50579142-50578942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               95-315
               

               Cow position:
               chr5:5808121-5808340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               95-327
               

               Cow position:
               chr5:13270993-13270761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               95-329
               

               Cow position:
               chr5:24464768-24464995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               95-334
               

               Cow position:
               chr5:52207567-52207804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 203
               

               Conread position:
               96-228
               

               Cow position:
               chr5:51490577-51490444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               96-232
               

               Cow position:
               chr5:42623154-42623020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               96-298
               

               Cow position:
               chr5:9487055-9486857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               96-313
               

               Cow position:
               chr5:8736254-8736037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               97-209
               

               Cow position:
               chr5:35725872-35725759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               97-232
               

               Cow position:
               chr5:45037276-45037411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 103
               

               Conread position:
               97-294
               

               Cow position:
               chr5:3677749-3677950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               97-298
               

               Cow position:
               chr5:16185404-16185606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               97-308
               

               Cow position:
               chr5:7898355-7898152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               97-311
               

               Cow position:
               chr5:33696369-33696586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               97-319
               

               Cow position:
               chr5:36822913-36823114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               97-320
               

               Cow position:
               chr5:54340798-54341011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               97-325
               

               Cow position:
               chr5:71579489-71579710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               126, 30
               

               Conread position:
               97-331
               

               Cow position:
               chr5:36747056-36746822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               97-334
               

               Cow position:
               chr5:20882598-20882360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               43, 184
               

               Conread position:
               98-269
               

               Cow position:
               chr5:22422592-22422420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-284
               

               Cow position:
               chr5:8159415-8159227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               98-284
               

               Cow position:
               chr5:20812573-20812761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               98-284
               

               Cow position:
               chr5:30035094-30035281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               98-293
               

               Cow position:
               chr5:44734698-44734506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               37, 129
               

               Conread position:
               98-295
               

               Cow position:
               chr5:61580309-61580503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               98-298
               

               Cow position:
               chr5:20387168-20387381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               98-298
               

               Cow position:
               chr5:63173016-63172822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               98-305
               

               Cow position:
               chr5:22102585-22102786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               43, 118
               

               Conread position:
               98-319
               

               Cow position:
               chr5:38820633-38820412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-320
               

               Cow position:
               chr5:1005841-1005616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-323
               

               Cow position:
               chr5:14293618-14293390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               99-213
               

               Cow position:
               chr5:30638551-30638435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               99-251
               

               Cow position:
               chr5:694892-695043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               99-282
               

               Cow position:
               chr5:54330909-54331097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               99-286
               

               Cow position:
               chr5:54753224-54753035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               99-296
               

               Cow position:
               chr5:16668725-16668917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 114
               

               Conread position:
               99-317
               

               Cow position:
               chr5:49821456-49821677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               99-321
               

               Cow position:
               chr5:47220516-47220740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               39, 208
               

               Conread position:
               99-324
               

               Cow position:
               chr5:57744896-57744662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 160
               

               Conread position:
               99-325
               

               Cow position:
               chr5:34288222-34288001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 38
               

               Conread position:
               99-328
               

               Cow position:
               chr5:37679200-37679429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-330
               

               Cow position:
               chr5:19561420-19561186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               99-331
               

               Cow position:
               chr5:57399224-57398995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               99-331
               

               Cow position:
               chr5:62341056-62341291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               100-258
               

               Cow position:
               chr5:21003345-21003494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               100-286
               

               Cow position:
               chr5:50087800-50087982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 8
               

               Conread position:
               100-294
               

               Cow position:
               chr5:29256678-29256486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 79
               

               Conread position:
               100-298
               

               Cow position:
               chr5:19079281-19079469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 72
               

               Conread position:
               100-298
               

               Cow position:
               chr5:24915498-24915299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               100-316
               

               Cow position:
               chr5:54127318-54127530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               100-317
               

               Cow position:
               chr5:46421613-46421845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               100-325
               

               Cow position:
               chr5:44798833-44799064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               100-330
               

               Cow position:
               chr5:58446155-58445922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 54
               

               Conread position:
               100-336
               

               Cow position:
               chr5:58756377-58756142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               40, 211
               

               Conread position:
               101-275
               

               Cow position:
               chr5:51125979-51125815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               101-324
               

               Cow position:
               chr5:64843941-64843715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               38, 201
               

               Conread position:
               102-213
               

               Cow position:
               chr5:54099821-54099933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               102-230
               

               Cow position:
               chr5:70353953-70353825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               102-282
               

               Cow position:
               chr5:69427422-69427251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               102-285
               

               Cow position:
               chr5:53795056-53795234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               102-286
               

               Cow position:
               chr5:53980723-53980538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               102-287
               

               Cow position:
               chr5:4347673-4347478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               102-300
               

               Cow position:
               chr5:15991608-15991417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               102-317
               

               Cow position:
               chr5:43839969-43839752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               102-324
               

               Cow position:
               chr5:62011714-62011932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 166
               

               Conread position:
               102-329
               

               Cow position:
               chr5:4864574-4864792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               103-245
               

               Cow position:
               chr5:4956580-4956437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               103-284
               

               Cow position:
               chr5:63646790-63646609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               103-298
               

               Cow position:
               chr5:26894687-26894487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               103-311
               

               Cow position:
               chr5:73424649-73424437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               103-317
               

               Cow position:
               chr5:40122578-40122364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 202
               

               Conread position:
               103-317
               

               Cow position:
               chr5:48154433-48154217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               103-320
               

               Cow position:
               chr5:9024281-9024057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               103-329
               

               Cow position:
               chr5:20126935-20127164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               103-568
               

               Cow position:
               chr5:62572564-62573027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               104-298
               

               Cow position:
               chr5:38647673-38647882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               104-311
               

               Cow position:
               chr5:37933747-37933954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               104-320
               

               Cow position:
               chr5:36370312-36370522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               105-298
               

               Cow position:
               chr5:25495324-25495125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 173
               

               Conread position:
               105-298
               

               Cow position:
               chr5:47279599-47279802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               105-305
               

               Cow position:
               chr5:62995991-62996192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               105-328
               

               Cow position:
               chr5:44901543-44901774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 213
               

               Conread position:
               106-213
               

               Cow position:
               chr5:18091039-18091147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               106-294
               

               Cow position:
               chr5:70189107-70189300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               106-294
               

               Cow position:
               chr5:71445425-71445614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               106-298
               

               Cow position:
               chr5:7676120-7675932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 106
               

               Conread position:
               106-298
               

               Cow position:
               chr5:12562725-12562534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               106-301
               

               Cow position:
               chr5:64024431-64024634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               106-316
               

               Cow position:
               chr5:23140554-23140343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 147
               

               Conread position:
               106-322
               

               Cow position:
               chr5:41755950-41755739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               197, 23
               

               Conread position:
               107-323
               

               Cow position:
               chr5:64492310-64492522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 194
               

               Conread position:
               108-258
               

               Cow position:
               chr5:46749788-46749639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               108-295
               

               Cow position:
               chr5:48128361-48128176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               108-298
               

               Cow position:
               chr5:27084334-27084525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               108-316
               

               Cow position:
               chr5:1694051-1693848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               109-315
               

               Cow position:
               chr5:46755166-46755369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 89
               

               Conread position:
               110-295
               

               Cow position:
               chr5:6876929-6876742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               110-323
               

               Cow position:
               chr5:60117467-60117678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               110-328
               

               Cow position:
               chr5:28881653-28881429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               30, 199
               

               Conread position:
               111-215
               

               Cow position:
               chr5:49566058-49566162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               111-298
               

               Cow position:
               chr5:36205730-36205916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               111-311
               

               Cow position:
               chr5:41736222-41736420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               30, 155
               

               Conread position:
               111-315
               

               Cow position:
               chr5:46710622-46710824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               111-315
               

               Cow position:
               chr5:46715522-46715724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               111-320
               

               Cow position:
               chr5:63068683-63068474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               30, 194
               

               Conread position:
               111-321
               

               Cow position:
               chr5:2355560-2355765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               111-322
               

               Cow position:
               chr5:37090599-37090389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               111-324
               

               Cow position:
               chr5:48062077-48061856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               111-327
               

               Cow position:
               chr5:56433921-56434139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               112-210
               

               Cow position:
               chr5:38418558-38418656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               112-271
               

               Cow position:
               chr5:1027428-1027275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 94
               

               Conread position:
               112-286
               

               Cow position:
               chr5:64008818-64008643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               112-298
               

               Cow position:
               chr5:29054569-29054755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               112-298
               

               Cow position:
               chr5:30221737-30221551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               112-316
               

               Cow position:
               chr5:19298638-19298428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               112-316
               

               Cow position:
               chr5:30796932-30796727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               112-323
               

               Cow position:
               chr5:44396140-44396350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 173
               

               Conread position:
               112-327
               

               Cow position:
               chr5:33513685-33513481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 112
               

               Conread position:
               112-327
               

               Cow position:
               chr5:57802893-57803116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 108
               

               Conread position:
               112-341
               

               Cow position:
               chr5:19972963-19972732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               112-384
               

               Cow position:
               chr5:44189154-44189432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 260
               

               Conread position:
               113-226
               

               Cow position:
               chr5:36251154-36251268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               113-286
               

               Cow position:
               chr5:65745724-65745554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               113-299
               

               Cow position:
               chr5:30492751-30492564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               113-322
               

               Cow position:
               chr5:57447621-57447417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               113-330
               

               Cow position:
               chr5:56535578-56535796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               113-333
               

               Cow position:
               chr5:43815776-43815559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               115-214
               

               Cow position:
               chr5:17644584-17644484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               115-232
               

               Cow position:
               chr5:54067998-54067877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 105
               

               Conread position:
               115-235
               

               Cow position:
               chr5:29979914-29979793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               115-252
               

               Cow position:
               chr5:60126734-60126876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               115-255
               

               Cow position:
               chr5:41522634-41522501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               115-266
               

               Cow position:
               chr5:56327677-56327529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               115-292
               

               Cow position:
               chr5:7139789-7139621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               115-294
               

               Cow position:
               chr5:36634751-36634930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               115-295
               

               Cow position:
               chr5:31648464-31648638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               115-298
               

               Cow position:
               chr5:6086299-6086115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               8, 92
               

               Conread position:
               115-298
               

               Cow position:
               chr5:59335814-59335999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               115-298
               

               Cow position:
               chr5:70270911-70271093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               115-299
               

               Cow position:
               chr5:60761701-60761515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               115-305
               

               Cow position:
               chr5:5010053-5009875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               115-312
               

               Cow position:
               chr5:56477249-56477444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 113
               

               Conread position:
               115-313
               

               Cow position:
               chr5:74887856-74887658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               115-317
               

               Cow position:
               chr5:3817643-3817443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               115-318
               

               Cow position:
               chr5:37919441-37919244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               115-323
               

               Cow position:
               chr5:53779197-53779403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               115-325
               

               Cow position:
               chr5:5666778-5666568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 153
               

               Conread position:
               115-331
               

               Cow position:
               chr5:35394389-35394180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               115-349
               

               Cow position:
               chr5:51012043-51012275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               116-293
               

               Cow position:
               chr5:50762277-50762463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               116-294
               

               Cow position:
               chr5:51800566-51800387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               116-295
               

               Cow position:
               chr5:19294481-19294296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               116-322
               

               Cow position:
               chr5:1766254-1766048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               116-328
               

               Cow position:
               chr5:8146320-8146102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               117-252
               

               Cow position:
               chr5:30497543-30497677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               117-298
               

               Cow position:
               chr5:22186464-22186632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               117-298
               

               Cow position:
               chr5:57087017-57086836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 89
               

               Conread position:
               117-298
               

               Cow position:
               chr5:69538586-69538768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               117-305
               

               Cow position:
               chr5:38770568-38770380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-312
               

               Cow position:
               chr5:31527349-31527153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 153
               

               Conread position:
               117-314
               

               Cow position:
               chr5:56525666-56525470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               117-315
               

               Cow position:
               chr5:19972761-19972565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               117-320
               

               Cow position:
               chr5:41226960-41226757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 187
               

               Conread position:
               117-324
               

               Cow position:
               chr5:54404808-54404611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               117-325
               

               Cow position:
               chr5:17371652-17371442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               117-326
               

               Cow position:
               chr5:45854537-45854756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               117-331
               

               Cow position:
               chr5:46499606-46499818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               24, 191
               

               Conread position:
               118-323
               

               Cow position:
               chr5:20345584-20345788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               118-325
               

               Cow position:
               chr5:23528467-23528257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               118-325
               

               Cow position:
               chr5:38683550-38683757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 174
               

               Conread position:
               119-242
               

               Cow position:
               chr5:72845778-72845658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               119-264
               

               Cow position:
               chr5:23855621-23855481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               119-284
               

               Cow position:
               chr5:69682301-69682135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               119-298
               

               Cow position:
               chr5:14454089-14454270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               119-298
               

               Cow position:
               chr5:61201807-61201987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               119-311
               

               Cow position:
               chr5:40413221-40413020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 195
               

               Conread position:
               119-314
               

               Cow position:
               chr5:12724344-12724150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               119-319
               

               Cow position:
               chr5:55162674-55162876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               119-320
               

               Cow position:
               chr5:55041257-55041461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               119-335
               

               Cow position:
               chr5:57556077-57556296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               21, 150
               

               Conread position:
               120-213
               

               Cow position:
               chr5:4336341-4336435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               120-286
               

               Cow position:
               chr5:56734337-56734495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               120-292
               

               Cow position:
               chr5:34787623-34787792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               120-296
               

               Cow position:
               chr5:42674220-42674385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               120-298
               

               Cow position:
               chr5:17987846-17987667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               120-311
               

               Cow position:
               chr5:1678637-1678829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               120-325
               

               Cow position:
               chr5:61043235-61043442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               120-328
               

               Cow position:
               chr5:50421928-50421716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               120-329
               

               Cow position:
               chr5:44312366-44312156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               120-331
               

               Cow position:
               chr5:70346350-70346558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 154
               

               Conread position:
               121-320
               

               Cow position:
               chr5:19052742-19052542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 112
               

               Conread position:
               121-322
               

               Cow position:
               chr5:68461623-68461423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               19, 147
               

               Conread position:
               122-316
               

               Cow position:
               chr5:52029458-52029649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               122-320
               

               Cow position:
               chr5:60207759-60207950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               123-314
               

               Cow position:
               chr5:34918398-34918585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               123-315
               

               Cow position:
               chr5:37253481-37253664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               123-320
               

               Cow position:
               chr5:67950734-67950539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               123-349
               

               Cow position:
               chr5:58401621-58401846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               15, 93
               

               Conread position:
               124-297
               

               Cow position:
               chr5:58454524-58454692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               125-294
               

               Cow position:
               chr5:41530886-41530714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               125-298
               

               Cow position:
               chr5:63940007-63939832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               126-287
               

               Cow position:
               chr5:29599491-29599337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               126-294
               

               Cow position:
               chr5:29895226-29895393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               126-295
               

               Cow position:
               chr5:60100525-60100685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               126-298
               

               Cow position:
               chr5:49207272-49207103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 101
               

               Conread position:
               126-316
               

               Cow position:
               chr5:60153830-60154012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               127-250
               

               Cow position:
               chr5:9352566-9352688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               127-315
               

               Cow position:
               chr5:21339213-21339018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 184
               

               Conread position:
               127-331
               

               Cow position:
               chr5:21721414-21721220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               128-305
               

               Cow position:
               chr5:56284360-56284540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               128-327
               

               Cow position:
               chr5:17683386-17683188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               12, 81
               

               Conread position:
               128-329
               

               Cow position:
               chr5:57231693-57231887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               129-232
               

               Cow position:
               chr5:54154144-54154043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               129-292
               

               Cow position:
               chr5:38079428-38079594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               129-294
               

               Cow position:
               chr5:40292880-40292718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               129-304
               

               Cow position:
               chr5:63763723-63763897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               129-320
               

               Cow position:
               chr5:29010314-29010495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               129-330
               

               Cow position:
               chr5:56563813-56564006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 20
               

               Conread position:
               130-323
               

               Cow position:
               chr5:67339942-67340131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               130-335
               

               Cow position:
               chr5:58232198-58232401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               131-287
               

               Cow position:
               chr5:31317058-31317216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               131-298
               

               Cow position:
               chr5:74980367-74980537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-292
               

               Cow position:
               chr5:59662997-59662837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               132-298
               

               Cow position:
               chr5:55749976-55749810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               7, 50
               

               Conread position:
               132-314
               

               Cow position:
               chr5:48819334-48819517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               132-317
               

               Cow position:
               chr5:59958237-59958411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               132-322
               

               Cow position:
               chr5:22957471-22957650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               132-324
               

               Cow position:
               chr5:15770394-15770202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               73, 174
               

               Conread position:
               132-329
               

               Cow position:
               chr5:31975580-31975789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               132-345
               

               Cow position:
               chr5:40637362-40637571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               133-275
               

               Cow position:
               chr5:50525587-50525723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 60
               

               Conread position:
               133-294
               

               Cow position:
               chr5:47888669-47888508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               133-298
               

               Cow position:
               chr5:5030505-5030665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               133-298
               

               Cow position:
               chr5:75116510-75116344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               133-320
               

               Cow position:
               chr5:56881405-56881593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               7, 182
               

               Conread position:
               134-317
               

               Cow position:
               chr5:26149097-26149280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               6, 104
               

               Conread position:
               134-329
               

               Cow position:
               chr5:24108996-24108800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               136-298
               

               Cow position:
               chr5:46479176-46479021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               136-311
               

               Cow position:
               chr5:37919797-37919621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               138-294
               

               Cow position:
               chr5:43611766-43611921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               138-295
               

               Cow position:
               chr5:718218-718372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               138-298
               

               Cow position:
               chr5:55949611-55949452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               138-360
               

               Cow position:
               chr5:25446953-25447173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               139-232
               

               Cow position:
               chr5:63195151-63195058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-284
               

               Cow position:
               chr5:29261773-29261918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-294
               

               Cow position:
               chr5:30132795-30132644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               139-301
               

               Cow position:
               chr5:54712996-54712839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               139-326
               

               Cow position:
               chr5:56643136-56643319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               155
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               103, 79
               

               Conread position:
               139-331
               

               Cow position:
               chr5:12504721-12504536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               140-324
               

               Cow position:
               chr5:32975828-32976014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 132
               

               Conread position:
               140-330
               

               Cow position:
               chr5:58237380-58237196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               141-295
               

               Cow position:
               chr5:6245592-6245442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               142-296
               

               Cow position:
               chr5:54555118-54554961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               143-298
               

               Cow position:
               chr5:25450027-25450170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               143-321
               

               Cow position:
               chr5:12566470-12566294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               143-326
               

               Cow position:
               chr5:19626651-19626829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               144-317
               

               Cow position:
               chr5:55943642-55943476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               144-319
               

               Cow position:
               chr5:58487449-58487617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               146-294
               

               Cow position:
               chr5:71387283-71387421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               146-321
               

               Cow position:
               chr5:61593343-61593511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               147-334
               

               Cow position:
               chr5:56624440-56624252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               148-294
               

               Cow position:
               chr5:64162700-64162544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               149-294
               

               Cow position:
               chr5:57584955-57585098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               149-345
               

               Cow position:
               chr5:4728153-4728343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               173, 66
               

               Conread position:
               150-298
               

               Cow position:
               chr5:14419930-14419791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               150-328
               

               Cow position:
               chr5:28660310-28660485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               151-337
               

               Cow position:
               chr5:1178035-1178214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               152-335
               

               Cow position:
               chr5:3627095-3626919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               154-312
               

               Cow position:
               chr5:44868441-44868595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               156-298
               

               Cow position:
               chr5:74049910-74050050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               156-317
               

               Cow position:
               chr5:14000731-14000883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               156-326
               

               Cow position:
               chr5:75712052-75711882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               157, 38
               

               Conread position:
               157-291
               

               Cow position:
               chr5:53270577-53270710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               158-293
               

               Cow position:
               chr5:37572470-37572335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               160-313
               

               Cow position:
               chr5:22210982-22210834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               136, 55
               

               Conread position:
               161-298
               

               Cow position:
               chr5:41639505-41639368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-323
               

               Cow position:
               chr5:52153018-52152857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               163-324
               

               Cow position:
               chr5:52125302-52125141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               135, 96
               

               Conread position:
               167-311
               

               Cow position:
               chr5:34193236-34193378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               171-295
               

               Cow position:
               chr5:50703948-50703824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-298
               

               Cow position:
               chr5:52032206-52032082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               173-324
               

               Cow position:
               chr5:43434901-43434749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               174-302
               

               Cow position:
               chr5:59517153-59517028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               174-308
               

               Cow position:
               chr5:40740225-40740090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               174-317
               

               Cow position:
               chr5:62543943-62544079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               175-298
               

               Cow position:
               chr5:74690149-74690026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               175-323
               

               Cow position:
               chr5:56428469-56428320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               177-319
               

               Cow position:
               chr5:72867157-72867300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               179-331
               

               Cow position:
               chr5:32672726-32672572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               180-321
               

               Cow position:
               chr5:45337311-45337170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               182-330
               

               Cow position:
               chr5:32086914-32086765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               183-323
               

               Cow position:
               chr5:13471221-13471359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               185-319
               

               Cow position:
               chr5:17254109-17253983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               190-317
               

               Cow position:
               chr5:56578819-56578946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               193-320
               

               Cow position:
               chr5:41757734-41757861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-327
               

               Cow position:
               chr5:17644217-17644088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               308-593
               

               Cow position:
               chr5:1643268-1643560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               346-532
               

               Cow position:
               chr5:16101200-16101016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               366-559
               

               Cow position:
               chr5:4353158-4353351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               372-687
               

               Cow position:
               chr5:10097493-10097164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               6, 291
               

               Conread position:
               372-689
               

               Cow position:
               chr5:54695242-54694903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               6, 137
               

               Conread position:
               372-690
               

               Cow position:
               chr5:7809898-7809576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 137
               

               Conread position:
               372-691
               

               Cow position:
               chr5:27655311-27655651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               6, 24
               

               Conread position:
               372-692
               

               Cow position:
               chr5:24219700-24220048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               6, 137
               

               Conread position:
               374-691
               

               Cow position:
               chr5:40791408-40791742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               160, 65
               

               Conread position:
               376-579
               

               Cow position:
               chr5:8997463-8997248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 133
               

               Conread position:
               376-696
               

               Cow position:
               chr5:22554698-22555038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               156, 132
               

               Conread position:
               376-696
               

               Cow position:
               chr5:42043464-42043801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               156, 26
               

               Conread position:
               377-559
               

               Cow position:
               chr5:10773538-10773354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 131
               

               Conread position:
               377-673
               

               Cow position:
               chr5:25901896-25901583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               155, 77
               

               Conread position:
               377-691
               

               Cow position:
               chr5:4755161-4754826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               148, 24
               

               Conread position:
               377-691
               

               Cow position:
               chr5:6615727-6615391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               155, 131
               

               Conread position:
               377-691
               

               Cow position:
               chr5:72856439-72856776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               155, 129
               

               Conread position:
               383-522
               

               Cow position:
               chr5:58141671-58141533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               383-658
               

               Cow position:
               chr5:39245711-39245417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 127
               

               Conread position:
               383-684
               

               Cow position:
               chr5:31916220-31916535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               156, 48
               

               Conread position:
               383-691
               

               Cow position:
               chr5:9003539-9003208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               156, 125
               

               Conread position:
               383-691
               

               Cow position:
               chr5:32365338-32365631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               189, 11
               

               Conread position:
               386-691
               

               Cow position:
               chr5:52606047-52605721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               67, 121
               

               Conread position:
               387-593
               

               Cow position:
               chr5:64010279-64010069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               388-504
               

               Cow position:
               chr5:43381906-43382022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-527
               

               Cow position:
               chr5:57832580-57832439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               388-532
               

               Cow position:
               chr5:23846399-23846256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               388-584
               

               Cow position:
               chr5:57928795-57928592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               388-591
               

               Cow position:
               chr5:58013230-58013017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               388-593
               

               Cow position:
               chr5:28948166-28947952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               388-593
               

               Cow position:
               chr5:32165338-32165130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               388-593
               

               Cow position:
               chr5:34299447-34299657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               388-593
               

               Cow position:
               chr5:41357284-41357071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               388-593
               

               Cow position:
               chr5:46003073-46002861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               145, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr5:10513697-10513480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr5:26076623-26076408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 56
               

               Conread position:
               388-598
               

               Cow position:
               chr5:26512081-26511864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr5:31284672-31284889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr5:32775389-32775606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr5:50688389-50688606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-598
               

               Cow position:
               chr5:74036094-74036311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-601
               

               Cow position:
               chr5:31134420-31134200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-654
               

               Cow position:
               chr5:58000264-58000547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               100, 93
               

               Conread position:
               388-660
               

               Cow position:
               chr5:27490540-27490811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               138, 218
               

               Conread position:
               388-664
               

               Cow position:
               chr5:13808097-13807803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               144, 118
               

               Conread position:
               388-665
               

               Cow position:
               chr5:56932241-56931942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               388-684
               

               Cow position:
               chr5:42507336-42507654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-687
               

               Cow position:
               chr5:3628231-3627915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               145, 92
               

               Conread position:
               388-687
               

               Cow position:
               chr5:48534437-48534754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               146, 21
               

               Conread position:
               388-687
               

               Cow position:
               chr5:59064021-59064342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-688
               

               Cow position:
               chr5:60571-60247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               66, 122
               

               Conread position:
               388-688
               

               Cow position:
               chr5:4387761-4388082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               151, 119
               

               Conread position:
               388-688
               

               Cow position:
               chr5:30844405-30844728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               151, 128
               

               Conread position:
               388-688
               

               Cow position:
               chr5:31120630-31120307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-688
               

               Cow position:
               chr5:50604755-50604450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               167, 95
               

               Conread position:
               388-689
               

               Cow position:
               chr5:51166730-51166408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:443734-443407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               388-691
               

               Cow position:
               chr5:1641215-1640889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               388-691
               

               Cow position:
               chr5:2976362-2976688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:3970099-3970427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               85, 122
               

               Conread position:
               388-691
               

               Cow position:
               chr5:4434928-4434602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:4963802-4963478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               137, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:5105801-5106127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:5925384-5925057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               388-691
               

               Cow position:
               chr5:6772144-6772470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:11153882-11153557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:11632409-11632083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 122
               

               Conread position:
               388-691
               

               Cow position:
               chr5:12133179-12133499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 23
               

               Conread position:
               388-691
               

               Cow position:
               chr5:12729561-12729237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               146, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:14543725-14543398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               388-691
               

               Cow position:
               chr5:15361740-15362067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               388-691
               

               Cow position:
               chr5:18119902-18119576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               144, 118
               

               Conread position:
               388-691
               

               Cow position:
               chr5:26404318-26404013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 18
               

               Conread position:
               388-691
               

               Cow position:
               chr5:27196503-27196177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:29634005-29634331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:31750931-31751246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               144, 128
               

               Conread position:
               388-691
               

               Cow position:
               chr5:37084297-37083971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               137, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:37610365-37610040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               146, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:38661908-38662234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               151, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:41066601-41066927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               137, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:46666650-46666976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               151, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:47470957-47471282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:47697618-47697294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               388-691
               

               Cow position:
               chr5:51745799-51746125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:52823630-52823304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               146, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:54361875-54362200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               141, 96
               

               Conread position:
               388-691
               

               Cow position:
               chr5:54721235-54721557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               151, 104
               

               Conread position:
               388-691
               

               Cow position:
               chr5:54928343-54928017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               144, 118
               

               Conread position:
               388-691
               

               Cow position:
               chr5:54930671-54930345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               144, 118
               

               Conread position:
               388-691
               

               Cow position:
               chr5:57336837-57336511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               147, 120
               

               Conread position:
               388-691
               

               Cow position:
               chr5:58191497-58191819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               388-691
               

               Cow position:
               chr5:58198587-58198912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 96
               

               Conread position:
               388-691
               

               Cow position:
               chr5:59145951-59146279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               388-692
               

               Cow position:
               chr5:34472597-34472273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               388-692
               

               Cow position:
               chr5:34525984-34526302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 125
               

               Conread position:
               388-693
               

               Cow position:
               chr5:32965486-32965162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               143, 120
               

               Conread position:
               388-693
               

               Cow position:
               chr5:45180516-45180184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               388-696
               

               Cow position:
               chr5:445096-445424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 52
               

               Conread position:
               388-696
               

               Cow position:
               chr5:23957750-23957419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-696
               

               Cow position:
               chr5:32953903-32954234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               144, 120
               

               Conread position:
               388-696
               

               Cow position:
               chr5:49521296-49521617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               389-523
               

               Cow position:
               chr5:73486345-73486212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               389-584
               

               Cow position:
               chr5:3252559-3252364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               389-588
               

               Cow position:
               chr5:38737375-38737577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               389-590
               

               Cow position:
               chr5:4349419-4349209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               389-590
               

               Cow position:
               chr5:57124088-57124290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               100, 90
               

               Conread position:
               389-593
               

               Cow position:
               chr5:5859536-5859747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               143, 123
               

               Conread position:
               389-593
               

               Cow position:
               chr5:27549882-27549671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               150, 119
               

               Conread position:
               389-593
               

               Cow position:
               chr5:40347703-40347492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               389-593
               

               Cow position:
               chr5:47342291-47342502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               389-593
               

               Cow position:
               chr5:73443980-73444191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               389-664
               

               Cow position:
               chr5:35207193-35206901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               143, 34
               

               Conread position:
               389-680
               

               Cow position:
               chr5:27178225-27178543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               389-683
               

               Cow position:
               chr5:30581914-30582229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 137
               

               Conread position:
               389-687
               

               Cow position:
               chr5:64845680-64845363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               144, 74
               

               Conread position:
               389-688
               

               Cow position:
               chr5:25929112-25928799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 90
               

               Conread position:
               389-688
               

               Cow position:
               chr5:48805873-48805552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-690
               

               Cow position:
               chr5:14877553-14877230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               143, 127
               

               Conread position:
               389-691
               

               Cow position:
               chr5:8177686-8178010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               145, 117
               

               Conread position:
               389-691
               

               Cow position:
               chr5:9091841-9091520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 119
               

               Conread position:
               389-691
               

               Cow position:
               chr5:21522155-21521830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               389-691
               

               Cow position:
               chr5:29826946-29827270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               389-691
               

               Cow position:
               chr5:30156936-30157262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               389-691
               

               Cow position:
               chr5:41952496-41952172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               76, 140
               

               Conread position:
               389-691
               

               Cow position:
               chr5:44709802-44709480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-691
               

               Cow position:
               chr5:47560979-47560659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               143, 112
               

               Conread position:
               389-691
               

               Cow position:
               chr5:48225996-48225676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 120
               

               Conread position:
               389-691
               

               Cow position:
               chr5:54786529-54786206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               143, 65
               

               Conread position:
               389-692
               

               Cow position:
               chr5:39448854-39448531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               124, 95
               

               Conread position:
               389-695
               

               Cow position:
               chr5:18558825-18558497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               143, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr5:413126-412802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               389-696
               

               Cow position:
               chr5:2917043-2917371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               144, 93
               

               Conread position:
               389-696
               

               Cow position:
               chr5:7141523-7141203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               389-696
               

               Cow position:
               chr5:7395836-7396156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               162, 84
               

               Conread position:
               389-696
               

               Cow position:
               chr5:10921419-10921752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               389-696
               

               Cow position:
               chr5:14637001-14636671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr5:18249636-18249966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr5:19979338-19979007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               145, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr5:24101228-24101557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               140, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr5:27690575-27690901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               134, 46
               

               Conread position:
               389-696
               

               Cow position:
               chr5:32755866-32755537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               389-696
               

               Cow position:
               chr5:49117773-49117444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               389-696
               

               Cow position:
               chr5:54622201-54622527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 116
               

               Conread position:
               389-696
               

               Cow position:
               chr5:57920503-57920828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               144, 119
               

               Conread position:
               389-696
               

               Cow position:
               chr5:67653909-67654235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 79
               

               Conread position:
               390-569
               

               Cow position:
               chr5:40933015-40933202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               390-593
               

               Cow position:
               chr5:24298592-24298801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               390-593
               

               Cow position:
               chr5:58771291-58771081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               390-597
               

               Cow position:
               chr5:1339345-1339130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 117
               

               Conread position:
               390-608
               

               Cow position:
               chr5:24644291-24644067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               50, 120
               

               Conread position:
               390-680
               

               Cow position:
               chr5:70401484-70401772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               142, 114
               

               Conread position:
               390-681
               

               Cow position:
               chr5:40897752-40897440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               149, 54
               

               Conread position:
               390-691
               

               Cow position:
               chr5:10066972-10066648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               390-691
               

               Cow position:
               chr5:10813786-10814110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               142, 118
               

               Conread position:
               390-691
               

               Cow position:
               chr5:29742978-29742655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               390-691
               

               Cow position:
               chr5:37379662-37379989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               390-691
               

               Cow position:
               chr5:46779096-46779418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               135, 8
               

               Conread position:
               390-691
               

               Cow position:
               chr5:48409887-48409558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 127
               

               Conread position:
               390-693
               

               Cow position:
               chr5:10543092-10542766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               144, 118
               

               Conread position:
               390-696
               

               Cow position:
               chr5:3788806-3789135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               149, 116
               

               Conread position:
               390-696
               

               Cow position:
               chr5:7276412-7276740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               142, 116
               

               Conread position:
               390-696
               

               Cow position:
               chr5:12920977-12921305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               143, 116
               

               Conread position:
               390-696
               

               Cow position:
               chr5:37734952-37735283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               391-593
               

               Cow position:
               chr5:18704238-18704448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               136, 118
               

               Conread position:
               391-691
               

               Cow position:
               chr5:6585881-6585551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 117
               

               Conread position:
               391-691
               

               Cow position:
               chr5:46686028-46685712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               161, 88
               

               Conread position:
               391-696
               

               Cow position:
               chr5:3501548-3501221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               141, 115
               

               Conread position:
               391-696
               

               Cow position:
               chr5:6152248-6151925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               391-696
               

               Cow position:
               chr5:46735700-46735369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 118
               

               Conread position:
               392-532
               

               Cow position:
               chr5:16910506-16910367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               101, 71
               

               Conread position:
               392-593
               

               Cow position:
               chr5:13531313-13531111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               392-689
               

               Cow position:
               chr5:42745355-42745675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               392-691
               

               Cow position:
               chr5:59770628-59770949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               140, 106
               

               Conread position:
               392-693
               

               Cow position:
               chr5:5716473-5716150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               140, 116
               

               Conread position:
               393-688
               

               Cow position:
               chr5:32089208-32088895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               393-696
               

               Cow position:
               chr5:23829588-23829268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               139, 113
               

               Conread position:
               394-617
               

               Cow position:
               chr5:34146345-34146118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               158, 25
               

               Conread position:
               397-596
               

               Cow position:
               chr5:12502587-12502382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               134, 111
               

               Conread position:
               397-691
               

               Cow position:
               chr5:28222643-28222338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 264
               

               Conread position:
               398-593
               

               Cow position:
               chr5:27005682-27005880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 52
               

               Conread position:
               398-593
               

               Cow position:
               chr5:49911331-49911528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               141, 34
               

               Conread position:
               398-688
               

               Cow position:
               chr5:34191509-34191823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 110
               

               Conread position:
               398-691
               

               Cow position:
               chr5:42282757-42283072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               134, 110
               

               Conread position:
               398-691
               

               Cow position:
               chr5:55683460-55683770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 17
               

               Conread position:
               399-626
               

               Cow position:
               chr5:73457760-73457992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               133, 111
               

               Conread position:
               399-688
               

               Cow position:
               chr5:76141479-76141775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               404-696
               

               Cow position:
               chr5:64779415-64779100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               128, 102
               

               Conread position:
               405-691
               

               Cow position:
               chr5:6456070-6455761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 103
               

               Conread position:
               406-593
               

               Cow position:
               chr5:46649677-46649873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               409-691
               

               Cow position:
               chr5:66909701-66910006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               409-696
               

               Cow position:
               chr5:62435723-62436033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               123, 99
               

               Conread position:
               410-687
               

               Cow position:
               chr5:17646474-17646183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               410-692
               

               Cow position:
               chr5:58244197-58243893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               122, 96
               

               Conread position:
               414-691
               

               Cow position:
               chr5:30293921-30294221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               118, 102
               

               Conread position:
               415-693
               

               Cow position:
               chr5:18900939-18901238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               124, 69
               

               Conread position:
               424-693
               

               Cow position:
               chr5:62377006-62377278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               126, 9
               

               Conread position:
               449-683
               

               Cow position:
               chr5:34905361-34905611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               453-691
               

               Cow position:
               chr5:41229402-41229145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               16, 57
               
Show alignments to all cow chromosomes.
Conread position:	7-230
Cow position:	chr5:56339080-56338861 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	162
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	64, 24
Conread position:	7-305
Cow position:	chr5:65967797-65967504 (view UCSC Genome Browser custom track)
Alignm length:	303
Alignm identity:	207
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	24, 9
Conread position:	9-285
Cow position:	chr5:66466259-66466526 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	184
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	132, 7
Conread position:	11-189
Cow position:	chr5:9390487-9390676 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	144
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	52, 0
Conread position:	11-298
Cow position:	chr5:43923216-43922945 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	210
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	53, 125
Conread position:	13-231
Cow position:	chr5:23168885-23168665 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	156
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	74, 0
Conread position:	13-236
Cow position:	chr5:24175311-24175536 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	161
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	39, 99
Conread position:	13-314
Cow position:	chr5:63114533-63114225 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	204
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	31, 0
Conread position:	13-315
Cow position:	chr5:41303145-41302832 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	198
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	63, 0
Conread position:	14-123
Cow position:	chr5:24485492-24485382 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	90
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	59, 0
Conread position:	14-129
Cow position:	chr5:32956151-32956036 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	90
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	14-136
Cow position:	chr5:21964232-21964354 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	102
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	14, 50
Conread position:	14-137
Cow position:	chr5:29980042-29979916 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	102
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	49, 0
Conread position:	14-158
Cow position:	chr5:41951149-41951008 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	113
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	125, 49
Conread position:	14-167
Cow position:	chr5:40039825-40039669 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	120
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	60, 44
Conread position:	14-169
Cow position:	chr5:34192846-34193005 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	126
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	52, 137
Conread position:	14-173
Cow position:	chr5:4617312-4617469 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	119
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	101, 54
Conread position:	14-178
Cow position:	chr5:11965384-11965222 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	127
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	31, 14
Conread position:	14-186
Cow position:	chr5:55928886-55929060 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	139
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	56, 153
Conread position:	14-189
Cow position:	chr5:58793664-58793488 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	131
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	61, 44