Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 764-940 |
| Cow position: | chr13:56019239-56019054 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 127 |
| Conread position: | 766-937 |
| Cow position: | chr13:20520073-20520250 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 781-931 |
| Cow position: | chr13:3153523-3153679 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 109 |
| Conread position: | 781-931 |
| Cow position: | chr13:5263504-5263352 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 781-931 |
| Cow position: | chr13:30315276-30315436 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 781-931 |
| Cow position: | chr13:34873360-34873518 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 781-973 |
| Cow position: | chr13:34533153-34532958 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 781-984 |
| Cow position: | chr13:21981194-21980991 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 127 |
| Conread position: | 781-995 |
| Cow position: | chr13:19182894-19182682 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 782-931 |
| Cow position: | chr13:43576787-43576943 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 782-939 |
| Cow position: | chr13:9707970-9707810 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 783-931 |
| Cow position: | chr13:47676159-47676006 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 783-937 |
| Cow position: | chr13:8229931-8230090 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 114 |
| Conread position: | 783-962 |
| Cow position: | chr13:45593701-45593879 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 102 |
| Conread position: | 784-888 |
| Cow position: | chr13:25082881-25082985 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 784-920 |
| Cow position: | chr13:19033334-19033476 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 106 |
| Conread position: | 784-924 |
| Cow position: | chr13:28605616-28605469 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-930 |
| Cow position: | chr13:17823171-17823022 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr13:5659986-5659838 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 784-931 |
| Cow position: | chr13:9551142-9551290 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 100 |
| Conread position: | 784-937 |
| Cow position: | chr13:9124707-9124861 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 784-957 |
| Cow position: | chr13:53847340-53847164 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 784-964 |
| Cow position: | chr13:20789740-20789552 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 105 |
| Conread position: | 785-931 |
| Cow position: | chr13:8367497-8367647 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 785-931 |
| Cow position: | chr13:37946606-37946460 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 106 |
| Conread position: | 785-955 |
| Cow position: | chr13:40541329-40541155 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 104 |
| Conread position: | 785-966 |
| Cow position: | chr13:6996934-6997120 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 101 |
| Conread position: | 786-931 |
| Cow position: | chr13:37030130-37030271 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 787-911 |
| Cow position: | chr13:30396500-30396628 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 787-918 |
| Cow position: | chr13:4965182-4965311 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 787-931 |
| Cow position: | chr13:24094535-24094385 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 103 |
| Conread position: | 787-931 |
| Cow position: | chr13:24107765-24107619 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 5, 99 |
| Conread position: | 787-931 |
| Cow position: | chr13:25941480-25941334 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 787-931 |
| Cow position: | chr13:32282908-32283057 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 21 |
| Conread position: | 787-931 |
| Cow position: | chr13:43577769-43577920 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 789-925 |
| Cow position: | chr13:10989290-10989147 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 789-931 |
| Cow position: | chr13:11146837-11146986 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 789-941 |
| Cow position: | chr13:55007986-55007831 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 791-931 |
| Cow position: | chr13:2529166-2529021 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 791-931 |
| Cow position: | chr13:45499017-45499158 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 794-925 |
| Cow position: | chr13:40483191-40483056 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 801-934 |
| Cow position: | chr13:52027340-52027205 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 85 |
Show alignments to all cow chromosomes.