Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 763-905 |
| Cow position: | chr15:795156-795014 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 768-927 |
| Cow position: | chr15:4789102-4788940 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 770-931 |
| Cow position: | chr15:48052730-48052571 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 50 |
| Conread position: | 775-931 |
| Cow position: | chr15:20906157-20905999 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 778-918 |
| Cow position: | chr15:36457742-36457599 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 778-962 |
| Cow position: | chr15:13863859-13863666 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 6, 36 |
| Conread position: | 780-926 |
| Cow position: | chr15:25366187-25366033 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 780-931 |
| Cow position: | chr15:40562805-40562649 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 780-953 |
| Cow position: | chr15:6905417-6905592 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 153, 97 |
| Conread position: | 781-885 |
| Cow position: | chr15:42142751-42142856 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 781-911 |
| Cow position: | chr15:43634151-43634016 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 781-931 |
| Cow position: | chr15:17124592-17124435 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 781-931 |
| Cow position: | chr15:19554047-19553891 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 781-931 |
| Cow position: | chr15:19771015-19771169 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 781-931 |
| Cow position: | chr15:37381508-37381660 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 113 |
| Conread position: | 781-936 |
| Cow position: | chr15:608022-608184 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 118 |
| Conread position: | 781-936 |
| Cow position: | chr15:5409015-5408859 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 103 |
| Conread position: | 781-963 |
| Cow position: | chr15:49491530-49491711 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 782-932 |
| Cow position: | chr15:9978983-9979135 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 783-911 |
| Cow position: | chr15:36539825-36539957 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 105 |
| Conread position: | 783-962 |
| Cow position: | chr15:22531554-22531729 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 95 |
| Conread position: | 784-921 |
| Cow position: | chr15:11635299-11635435 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 784-925 |
| Cow position: | chr15:14880450-14880315 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 784-931 |
| Cow position: | chr15:18941916-18942063 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 784-931 |
| Cow position: | chr15:20566010-20566164 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr15:36388181-36388324 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 784-964 |
| Cow position: | chr15:44119587-44119404 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 52 |
| Conread position: | 786-931 |
| Cow position: | chr15:15177201-15177349 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 787-931 |
| Cow position: | chr15:1857611-1857757 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 787-931 |
| Cow position: | chr15:26380862-26380711 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 788-932 |
| Cow position: | chr15:19942483-19942627 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 789-962 |
| Cow position: | chr15:17621434-17621256 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 151 |
| Conread position: | 790-931 |
| Cow position: | chr15:27280525-27280672 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 791-925 |
| Cow position: | chr15:43114829-43114693 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 791-932 |
| Cow position: | chr15:30001585-30001728 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 793-921 |
| Cow position: | chr15:17471818-17471947 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 793-931 |
| Cow position: | chr15:51831901-51831754 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 793-976 |
| Cow position: | chr15:12045650-12045463 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 148 |
| Conread position: | 957-1153 |
| Cow position: | chr15:18687761-18687944 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 31 |
Show alignments to all cow chromosomes.