Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 752-925 |
| Cow position: | chr16:18206197-18206022 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 134 |
| Conread position: | 754-931 |
| Cow position: | chr16:7928141-7928328 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 755-925 |
| Cow position: | chr16:26676456-26676623 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 764-931 |
| Cow position: | chr16:16565335-16565177 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 767-931 |
| Cow position: | chr16:34291074-34291234 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 768-932 |
| Cow position: | chr16:50409477-50409303 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 128 |
| Conread position: | 768-938 |
| Cow position: | chr16:48145183-48145354 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 772-929 |
| Cow position: | chr16:56874010-56874174 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 772-932 |
| Cow position: | chr16:23681583-23681418 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 774-931 |
| Cow position: | chr16:52325378-52325542 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 117 |
| Conread position: | 776-931 |
| Cow position: | chr16:33302401-33302241 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 780-931 |
| Cow position: | chr16:9600629-9600476 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 781-931 |
| Cow position: | chr16:4911240-4911389 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 781-931 |
| Cow position: | chr16:10033076-10032919 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 781-931 |
| Cow position: | chr16:29311739-29311580 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 781-931 |
| Cow position: | chr16:30646720-30646569 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 781-931 |
| Cow position: | chr16:48567740-48567590 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 781-931 |
| Cow position: | chr16:56082151-56082308 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 781-934 |
| Cow position: | chr16:49388599-49388447 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 82, 104 |
| Conread position: | 781-936 |
| Cow position: | chr16:8809886-8810042 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 112 |
| Conread position: | 781-937 |
| Cow position: | chr16:31493260-31493100 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 781-951 |
| Cow position: | chr16:56615291-56615470 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 781-964 |
| Cow position: | chr16:11775785-11775971 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 781-964 |
| Cow position: | chr16:42253194-42253376 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 782-870 |
| Cow position: | chr16:32389311-32389399 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 782-931 |
| Cow position: | chr16:10011638-10011796 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 782-931 |
| Cow position: | chr16:24672650-24672806 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 78, 125 |
| Conread position: | 782-931 |
| Cow position: | chr16:33290597-33290441 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 80, 108 |
| Conread position: | 783-918 |
| Cow position: | chr16:33073677-33073816 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 783-924 |
| Cow position: | chr16:23089051-23088908 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 783-931 |
| Cow position: | chr16:22984959-22984810 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 102 |
| Conread position: | 783-931 |
| Cow position: | chr16:32142301-32142147 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 116 |
| Conread position: | 783-931 |
| Cow position: | chr16:44144600-44144445 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 85, 108 |
| Conread position: | 784-925 |
| Cow position: | chr16:25419043-25419191 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 107 |
| Conread position: | 784-925 |
| Cow position: | chr16:29712624-29712482 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 101 |
| Conread position: | 784-931 |
| Cow position: | chr16:31559112-31558958 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr16:44429085-44428940 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 785-926 |
| Cow position: | chr16:19756572-19756715 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 786-931 |
| Cow position: | chr16:15714318-15714166 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 786-932 |
| Cow position: | chr16:19670151-19670297 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 96 |
| Conread position: | 787-915 |
| Cow position: | chr16:30561569-30561441 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 76, 94 |
| Conread position: | 787-915 |
| Cow position: | chr16:31701802-31701674 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 76, 94 |
| Conread position: | 787-931 |
| Cow position: | chr16:15407351-15407502 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 112 |
| Conread position: | 791-931 |
| Cow position: | chr16:50569461-50569320 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 792-931 |
| Cow position: | chr16:1548681-1548821 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 101 |
| Conread position: | 802-931 |
| Cow position: | chr16:14568301-14568432 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 84 |
Show alignments to all cow chromosomes.