Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 754-937 |
| Cow position: | chr17:16867996-16868179 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 755-932 |
| Cow position: | chr17:6317832-6318006 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 766-931 |
| Cow position: | chr17:10037673-10037504 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 767-945 |
| Cow position: | chr17:18673773-18673957 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 774-976 |
| Cow position: | chr17:7571365-7571159 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 166 |
| Conread position: | 777-921 |
| Cow position: | chr17:40355511-40355365 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 779-931 |
| Cow position: | chr17:4817784-4817624 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 780-926 |
| Cow position: | chr17:10820736-10820883 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 105 |
| Conread position: | 780-931 |
| Cow position: | chr17:20157860-20157704 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 781-931 |
| Cow position: | chr17:6787190-6787033 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 781-931 |
| Cow position: | chr17:12946109-12946255 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 781-931 |
| Cow position: | chr17:15883926-15883768 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 781-931 |
| Cow position: | chr17:25118138-25117981 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 782-921 |
| Cow position: | chr17:19471522-19471664 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 782-931 |
| Cow position: | chr17:36814615-36814458 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 110 |
| Conread position: | 783-931 |
| Cow position: | chr17:6761605-6761751 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 784-931 |
| Cow position: | chr17:1469614-1469472 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 784-932 |
| Cow position: | chr17:21959435-21959592 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 117 |
| Conread position: | 784-934 |
| Cow position: | chr17:9509744-9509902 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 785-925 |
| Cow position: | chr17:35935408-35935262 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 785-931 |
| Cow position: | chr17:12289164-12289312 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 786-921 |
| Cow position: | chr17:1081454-1081311 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 786-931 |
| Cow position: | chr17:3364835-3364687 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 86, 98 |
| Conread position: | 788-931 |
| Cow position: | chr17:30108674-30108536 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 789-922 |
| Cow position: | chr17:32978694-32978827 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 789-964 |
| Cow position: | chr17:18818805-18818631 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 790-936 |
| Cow position: | chr17:22189673-22189527 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 792-929 |
| Cow position: | chr17:33271430-33271566 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 803-931 |
| Cow position: | chr17:10414722-10414595 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.