Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 743-931 |
| Cow position: | chr18:52383124-52382927 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 158 |
| Conread position: | 768-931 |
| Cow position: | chr18:16659235-16659409 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 780-921 |
| Cow position: | chr18:26354863-26355012 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 120 |
| Conread position: | 780-931 |
| Cow position: | chr18:39811405-39811560 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 780-931 |
| Cow position: | chr18:50359503-50359355 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 781-864 |
| Cow position: | chr18:19849594-19849677 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 781-907 |
| Cow position: | chr18:51405737-51405864 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 781-921 |
| Cow position: | chr18:5632442-5632301 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 81, 103 |
| Conread position: | 781-924 |
| Cow position: | chr18:21751557-21751408 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 109 |
| Conread position: | 781-931 |
| Cow position: | chr18:10214014-10214167 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 106 |
| Conread position: | 781-931 |
| Cow position: | chr18:23380305-23380154 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 781-931 |
| Cow position: | chr18:42967282-42967135 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 781-931 |
| Cow position: | chr18:45573558-45573403 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 108 |
| Conread position: | 781-932 |
| Cow position: | chr18:27079044-27078886 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 781-936 |
| Cow position: | chr18:36098535-36098384 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 781-965 |
| Cow position: | chr18:21050912-21051093 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 174, 85 |
| Conread position: | 781-976 |
| Cow position: | chr18:52251677-52251875 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 782-931 |
| Cow position: | chr18:14172037-14172188 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 782-968 |
| Cow position: | chr18:19385814-19386006 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 184 |
| Conread position: | 783-905 |
| Cow position: | chr18:30295434-30295557 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 102 |
| Conread position: | 783-924 |
| Cow position: | chr18:39460392-39460250 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 784-919 |
| Cow position: | chr18:2144744-2144606 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 103 |
| Conread position: | 784-921 |
| Cow position: | chr18:17195172-17195312 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 103 |
| Conread position: | 786-965 |
| Cow position: | chr18:24719482-24719301 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 786-979 |
| Cow position: | chr18:51643197-51643386 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 787-927 |
| Cow position: | chr18:48290067-48290200 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 787-931 |
| Cow position: | chr18:14586308-14586447 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 787-931 |
| Cow position: | chr18:29372041-29371890 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 787-931 |
| Cow position: | chr18:34490452-34490304 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 787-931 |
| Cow position: | chr18:49970480-49970630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 787-982 |
| Cow position: | chr18:15279814-15279619 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 106 |
| Conread position: | 789-924 |
| Cow position: | chr18:35235852-35235993 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 789-931 |
| Cow position: | chr18:37690320-37690173 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 791-929 |
| Cow position: | chr18:135493-135631 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 93 |
| Conread position: | 791-931 |
| Cow position: | chr18:33364377-33364235 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 798-925 |
| Cow position: | chr18:40047344-40047471 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 803-931 |
| Cow position: | chr18:42290179-42290304 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 54 |
Show alignments to all cow chromosomes.