Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 763-931 |
| Cow position: | chr21:24296475-24296648 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 768-926 |
| Cow position: | chr21:30359063-30359222 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 94, 116 |
| Conread position: | 770-930 |
| Cow position: | chr21:42189475-42189635 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 114 |
| Conread position: | 770-931 |
| Cow position: | chr21:19339943-19340112 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 772-939 |
| Cow position: | chr21:28244749-28244580 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 780-931 |
| Cow position: | chr21:745445-745295 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 104 |
| Conread position: | 781-921 |
| Cow position: | chr21:27863245-27863383 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 781-924 |
| Cow position: | chr21:34209740-34209889 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 91, 50 |
| Conread position: | 781-930 |
| Cow position: | chr21:8713683-8713839 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 781-930 |
| Cow position: | chr21:24222242-24222392 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 781-931 |
| Cow position: | chr21:16797125-16796971 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 781-931 |
| Cow position: | chr21:27677757-27677600 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 91, 125 |
| Conread position: | 781-931 |
| Cow position: | chr21:31652661-31652504 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 781-933 |
| Cow position: | chr21:16099286-16099447 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 112 |
| Conread position: | 781-962 |
| Cow position: | chr21:3135593-3135782 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 782-925 |
| Cow position: | chr21:30217941-30218079 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 782-931 |
| Cow position: | chr21:37706138-37706295 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 110 |
| Conread position: | 783-931 |
| Cow position: | chr21:36879610-36879752 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 86 |
| Conread position: | 784-925 |
| Cow position: | chr21:29658546-29658401 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 784-931 |
| Cow position: | chr21:27521071-27521220 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 785-931 |
| Cow position: | chr21:45970908-45971054 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 786-931 |
| Cow position: | chr21:10004614-10004766 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 787-925 |
| Cow position: | chr21:40134414-40134283 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 789-925 |
| Cow position: | chr21:31658888-31659025 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 68, 96 |
| Conread position: | 789-932 |
| Cow position: | chr21:15444816-15444966 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 790-938 |
| Cow position: | chr21:24351116-24350960 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 792-931 |
| Cow position: | chr21:32339482-32339620 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 793-932 |
| Cow position: | chr21:44829494-44829640 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 800-925 |
| Cow position: | chr21:32536646-32536522 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.