Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 758-924 |
| Cow position: | chr28:5428521-5428686 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 759-931 |
| Cow position: | chr28:11866431-11866604 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 99, 126 |
| Conread position: | 759-934 |
| Cow position: | chr28:16856869-16857049 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 130 |
| Conread position: | 760-930 |
| Cow position: | chr28:12598574-12598401 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 760-931 |
| Cow position: | chr28:4282251-4282430 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 764-938 |
| Cow position: | chr28:15362808-15362633 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 774-932 |
| Cow position: | chr28:11814856-11815016 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 112 |
| Conread position: | 774-937 |
| Cow position: | chr28:26304289-26304118 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 775-931 |
| Cow position: | chr28:11411315-11411473 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 776-905 |
| Cow position: | chr28:19395084-19394955 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 776-931 |
| Cow position: | chr28:20046762-20046612 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 779-932 |
| Cow position: | chr28:12448436-12448289 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 780-932 |
| Cow position: | chr28:8164997-8165156 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 781-931 |
| Cow position: | chr28:5674087-5673936 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 781-932 |
| Cow position: | chr28:16252191-16252345 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 781-936 |
| Cow position: | chr28:16200524-16200687 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 782-925 |
| Cow position: | chr28:27445361-27445506 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 782-931 |
| Cow position: | chr28:18791248-18791099 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 101 |
| Conread position: | 782-976 |
| Cow position: | chr28:33322666-33322477 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 783-936 |
| Cow position: | chr28:10615737-10615890 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 783-976 |
| Cow position: | chr28:7644960-7644760 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 784-905 |
| Cow position: | chr28:3449521-3449399 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 784-931 |
| Cow position: | chr28:4163368-4163522 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 107 |
| Conread position: | 784-931 |
| Cow position: | chr28:32014997-32014845 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 785-931 |
| Cow position: | chr28:21744924-21744776 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 787-931 |
| Cow position: | chr28:4937030-4937181 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 787-931 |
| Cow position: | chr28:10196661-10196804 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 787-931 |
| Cow position: | chr28:14657925-14657774 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 789-931 |
| Cow position: | chr28:22085338-22085481 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 93 |
| Conread position: | 790-925 |
| Cow position: | chr28:21263360-21263224 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 95 |
| Conread position: | 791-931 |
| Cow position: | chr28:11346284-11346426 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 95 |
| Conread position: | 791-931 |
| Cow position: | chr28:13174349-13174495 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 792-962 |
| Cow position: | chr28:10252711-10252889 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 793-931 |
| Cow position: | chr28:4186106-4185967 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 92 |
| Conread position: | 796-928 |
| Cow position: | chr28:34551023-34551155 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 85 |
Show alignments to all cow chromosomes.