Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 753-932 |
| Cow position: | chr6:45920941-45921119 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 761-936 |
| Cow position: | chr6:24339559-24339374 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 767-902 |
| Cow position: | chr6:17557640-17557506 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 770-931 |
| Cow position: | chr6:24903315-24903482 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 775-924 |
| Cow position: | chr6:34076419-34076269 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 110 |
| Conread position: | 775-931 |
| Cow position: | chr6:16627987-16627830 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 775-988 |
| Cow position: | chr6:62437675-62437457 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 778-925 |
| Cow position: | chr6:8186934-8187088 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 113 |
| Conread position: | 781-870 |
| Cow position: | chr6:12711542-12711631 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 781-925 |
| Cow position: | chr6:33302646-33302496 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 109 |
| Conread position: | 781-926 |
| Cow position: | chr6:62539357-62539502 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 781-930 |
| Cow position: | chr6:8688601-8688750 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 781-931 |
| Cow position: | chr6:21052196-21052354 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 781-931 |
| Cow position: | chr6:47151068-47150915 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 117 |
| Conread position: | 781-931 |
| Cow position: | chr6:62370937-62371085 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 781-932 |
| Cow position: | chr6:16137517-16137676 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 781-937 |
| Cow position: | chr6:53401830-53401676 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 782-931 |
| Cow position: | chr6:45159806-45159962 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 782-931 |
| Cow position: | chr6:47790549-47790704 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 782-932 |
| Cow position: | chr6:34463341-34463493 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 782-945 |
| Cow position: | chr6:12099441-12099607 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 783-931 |
| Cow position: | chr6:26408251-26408409 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 784-907 |
| Cow position: | chr6:33461627-33461503 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 784-925 |
| Cow position: | chr6:23381419-23381567 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr6:16016282-16016129 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr6:49686067-49685913 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr6:66947573-66947726 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 784-934 |
| Cow position: | chr6:65264304-65264453 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 784-936 |
| Cow position: | chr6:27888590-27888442 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 785-931 |
| Cow position: | chr6:21175581-21175433 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 785-931 |
| Cow position: | chr6:64432179-64432034 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 786-924 |
| Cow position: | chr6:40833775-40833912 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 786-925 |
| Cow position: | chr6:15058619-15058478 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 786-931 |
| Cow position: | chr6:46558298-46558153 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 787-931 |
| Cow position: | chr6:12928384-12928238 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 99 |
| Conread position: | 787-934 |
| Cow position: | chr6:31847000-31847148 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 98 |
| Conread position: | 787-936 |
| Cow position: | chr6:12669342-12669186 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 787-962 |
| Cow position: | chr6:18677464-18677635 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 787-970 |
| Cow position: | chr6:28561924-28562115 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 165 |
| Conread position: | 789-910 |
| Cow position: | chr6:34721869-34721993 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 789-930 |
| Cow position: | chr6:35984892-35985040 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 102 |
| Conread position: | 790-962 |
| Cow position: | chr6:36225351-36225171 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 791-931 |
| Cow position: | chr6:44543907-44544053 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 107 |
| Conread position: | 803-931 |
| Cow position: | chr6:27219394-27219263 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 59, 84 |
Show alignments to all cow chromosomes.