Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 764-931 |
| Cow position: | chr7:54090754-54090588 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 767-931 |
| Cow position: | chr7:36248358-36248195 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 768-925 |
| Cow position: | chr7:14029573-14029412 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 771-931 |
| Cow position: | chr7:23552704-23552866 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 8 |
| Conread position: | 772-928 |
| Cow position: | chr7:19241863-19242026 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 774-876 |
| Cow position: | chr7:43345607-43345710 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 776-915 |
| Cow position: | chr7:40304999-40305139 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 780-951 |
| Cow position: | chr7:55315951-55316125 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 781-925 |
| Cow position: | chr7:40412842-40412695 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 105 |
| Conread position: | 781-931 |
| Cow position: | chr7:8523529-8523682 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 106 |
| Conread position: | 781-931 |
| Cow position: | chr7:14519790-14519943 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 781-931 |
| Cow position: | chr7:52378873-52378727 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 781-932 |
| Cow position: | chr7:28441427-28441275 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 781-934 |
| Cow position: | chr7:30290691-30290850 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 781-934 |
| Cow position: | chr7:68172905-68173065 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 781-962 |
| Cow position: | chr7:1376378-1376203 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 781-964 |
| Cow position: | chr7:47523464-47523280 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 782-911 |
| Cow position: | chr7:47047097-47047227 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 782-925 |
| Cow position: | chr7:30012080-30011936 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 103 |
| Conread position: | 782-931 |
| Cow position: | chr7:9858603-9858453 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 782-931 |
| Cow position: | chr7:12484553-12484397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 109 |
| Conread position: | 782-931 |
| Cow position: | chr7:19466007-19466152 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 782-954 |
| Cow position: | chr7:3160048-3159882 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 782-961 |
| Cow position: | chr7:18016921-18016745 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 110 |
| Conread position: | 782-971 |
| Cow position: | chr7:17000980-17000781 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 177 |
| Conread position: | 783-924 |
| Cow position: | chr7:8387161-8387309 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 783-931 |
| Cow position: | chr7:16285325-16285479 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 783-931 |
| Cow position: | chr7:39514485-39514331 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 115 |
| Conread position: | 783-931 |
| Cow position: | chr7:39516265-39516419 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 115 |
| Conread position: | 784-931 |
| Cow position: | chr7:40414754-40414899 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 785-930 |
| Cow position: | chr7:40361900-40361750 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 785-931 |
| Cow position: | chr7:37698056-37697903 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 785-931 |
| Cow position: | chr7:47547654-47547507 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 786-925 |
| Cow position: | chr7:39528546-39528685 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 786-954 |
| Cow position: | chr7:59438699-59438529 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 86, 155 |
| Conread position: | 787-931 |
| Cow position: | chr7:519280-519427 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 787-931 |
| Cow position: | chr7:31885841-31885691 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 787-931 |
| Cow position: | chr7:41122024-41122169 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 98 |
| Conread position: | 787-931 |
| Cow position: | chr7:53791348-53791493 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 98 |
| Conread position: | 788-976 |
| Cow position: | chr7:21573816-21573628 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 8, 149 |
| Conread position: | 789-924 |
| Cow position: | chr7:43411782-43411648 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 789-931 |
| Cow position: | chr7:35779981-35779840 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 789-931 |
| Cow position: | chr7:43085122-43084972 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 789-936 |
| Cow position: | chr7:61740282-61740430 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 791-921 |
| Cow position: | chr7:7907730-7907861 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 93 |
| Conread position: | 803-931 |
| Cow position: | chr7:11946110-11945981 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 82 |
Show alignments to all cow chromosomes.