Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056G03.3 |
| Conread position: | 745-931 |
| Cow position: | chr9:34410613-34410423 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 753-930 |
| Cow position: | chr9:9724089-9723904 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 754-931 |
| Cow position: | chr9:8998148-8998322 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 763-931 |
| Cow position: | chr9:2397612-2397780 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 764-931 |
| Cow position: | chr9:35295497-35295663 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 764-931 |
| Cow position: | chr9:35832813-35832646 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 765-936 |
| Cow position: | chr9:34697499-34697321 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 772-934 |
| Cow position: | chr9:47469094-47469255 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 112 |
| Conread position: | 779-931 |
| Cow position: | chr9:28718534-28718685 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 780-930 |
| Cow position: | chr9:40215065-40215219 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 780-931 |
| Cow position: | chr9:35028351-35028192 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 781-911 |
| Cow position: | chr9:14738071-14738202 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 781-925 |
| Cow position: | chr9:19657155-19657009 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 105, 39 |
| Conread position: | 781-925 |
| Cow position: | chr9:28315243-28315396 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 781-930 |
| Cow position: | chr9:48808966-48809110 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 781-931 |
| Cow position: | chr9:8645084-8645239 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 781-931 |
| Cow position: | chr9:17785751-17785593 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 781-931 |
| Cow position: | chr9:26403614-26403758 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 781-936 |
| Cow position: | chr9:11123661-11123505 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 782-915 |
| Cow position: | chr9:35905177-35905043 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 782-929 |
| Cow position: | chr9:27279126-27279280 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 782-930 |
| Cow position: | chr9:24000934-24000785 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 103 |
| Conread position: | 782-931 |
| Cow position: | chr9:51609099-51609248 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 782-978 |
| Cow position: | chr9:8613393-8613195 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 783-911 |
| Cow position: | chr9:20901297-20901168 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 102 |
| Conread position: | 783-931 |
| Cow position: | chr9:8919825-8919973 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 783-931 |
| Cow position: | chr9:35932993-35932841 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 783-931 |
| Cow position: | chr9:45170564-45170408 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 783-931 |
| Cow position: | chr9:50647889-50648040 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 104 |
| Conread position: | 783-931 |
| Cow position: | chr9:51891072-51891219 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 95 |
| Conread position: | 783-976 |
| Cow position: | chr9:36457817-36458013 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 157 |
| Conread position: | 784-930 |
| Cow position: | chr9:59586137-59586283 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 91 |
| Conread position: | 784-931 |
| Cow position: | chr9:12280795-12280944 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 100 |
| Conread position: | 784-931 |
| Cow position: | chr9:26477034-26477189 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 784-931 |
| Cow position: | chr9:35049302-35049453 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 784-931 |
| Cow position: | chr9:44822501-44822351 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 784-977 |
| Cow position: | chr9:20394492-20394296 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 785-921 |
| Cow position: | chr9:8767592-8767454 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 785-929 |
| Cow position: | chr9:17769145-17769289 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 786-925 |
| Cow position: | chr9:63785085-63784947 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 789-931 |
| Cow position: | chr9:31344783-31344634 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 790-936 |
| Cow position: | chr9:41053859-41054008 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 791-931 |
| Cow position: | chr9:31359433-31359577 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 791-932 |
| Cow position: | chr9:34355948-34355803 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 793-928 |
| Cow position: | chr9:12495045-12495188 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 793-931 |
| Cow position: | chr9:44759096-44758957 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 804-931 |
| Cow position: | chr9:22443781-22443654 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 71 |
Show alignments to all cow chromosomes.