Cow genome map
Conread name: | Ss1.1-Pig4-TMW8056H21.3 |
Conread position: | 166-338 |
Cow position: | chr1:51256884-51257053 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 112, 20 |
Conread position: | 185-350 |
Cow position: | chr1:96928914-96929085 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 187-357 |
Cow position: | chr1:38692549-38692720 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 32, 130 |
Conread position: | 187-359 |
Cow position: | chr1:78791420-78791249 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 31, 10 |
Conread position: | 188-359 |
Cow position: | chr1:72731924-72732096 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 15, 31 |
Conread position: | 188-364 |
Cow position: | chr1:90423197-90423022 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 191-342 |
Cow position: | chr1:31190220-31190067 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 191-357 |
Cow position: | chr1:53039813-53039648 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 22, 87 |
Conread position: | 191-359 |
Cow position: | chr1:80764647-80764480 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 192-315 |
Cow position: | chr1:56408508-56408630 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 192-328 |
Cow position: | chr1:38525481-38525616 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 25, 65 |
Conread position: | 192-330 |
Cow position: | chr1:5162158-5162018 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-337 |
Cow position: | chr1:31871316-31871462 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-338 |
Cow position: | chr1:32244510-32244361 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 192-338 |
Cow position: | chr1:90413271-90413417 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 26, 5 |
Conread position: | 192-339 |
Cow position: | chr1:57264104-57263957 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 88, 5 |
Conread position: | 192-343 |
Cow position: | chr1:10719591-10719439 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 192-350 |
Cow position: | chr1:46839492-46839651 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 34, 5 |
Conread position: | 192-351 |
Cow position: | chr1:101771796-101771948 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 127, 56 |
Conread position: | 192-352 |
Cow position: | chr1:42555155-42555314 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 73, 5 |
Conread position: | 192-357 |
Cow position: | chr1:79278555-79278394 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 119 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 192-359 |
Cow position: | chr1:23099790-23099958 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-359 |
Cow position: | chr1:44746757-44746918 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 192-359 |
Cow position: | chr1:73653751-73653587 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 13, 58 |
Conread position: | 192-359 |
Cow position: | chr1:74947231-74947062 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 136 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 75, 5 |
Conread position: | 192-359 |
Cow position: | chr1:81301202-81301036 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-359 |
Cow position: | chr1:82378679-82378847 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 121 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 134, 104 |
Conread position: | 192-361 |
Cow position: | chr1:7142958-7142793 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 27, 125 |
Conread position: | 192-361 |
Cow position: | chr1:31390701-31390533 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 13, 25 |
Conread position: | 192-361 |
Cow position: | chr1:93110731-93110560 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 135 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 27, 161 |
Conread position: | 193-352 |
Cow position: | chr1:24407003-24406849 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 10, 78 |
Conread position: | 194-335 |
Cow position: | chr1:87148755-87148896 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 88, 39 |
Conread position: | 197-351 |
Cow position: | chr1:56477483-56477639 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 113 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 197-352 |
Cow position: | chr1:49131221-49131063 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 22, 133 |
Conread position: | 197-352 |
Cow position: | chr1:63504229-63504382 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 21, 32 |
Conread position: | 197-357 |
Cow position: | chr1:26688579-26688418 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 84, 124 |
Conread position: | 197-359 |
Cow position: | chr1:8869768-8869604 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 119 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 197-359 |
Cow position: | chr1:71136044-71136208 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 200-343 |
Cow position: | chr1:70389324-70389469 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 214-350 |
Cow position: | chr1:60281283-60281419 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 103 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 67, 42 |
Conread position: | 214-352 |
Cow position: | chr1:48769716-48769850 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 214-357 |
Cow position: | chr1:56635008-56635151 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 71, 81 |
Conread position: | 215-357 |
Cow position: | chr1:4032542-4032685 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 105 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 217-359 |
Cow position: | chr1:15902407-15902549 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 52, 82 |
Conread position: | 218-338 |
Cow position: | chr1:765650-765530 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 218-347 |
Cow position: | chr1:64302331-64302201 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 218-349 |
Cow position: | chr1:48083641-48083774 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 218-350 |
Cow position: | chr1:75347538-75347671 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 112 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 218-350 |
Cow position: | chr1:85596129-85595997 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 62, 45 |
Conread position: | 218-351 |
Cow position: | chr1:21934259-21934126 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 111 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 66, 74 |
Conread position: | 218-351 |
Cow position: | chr1:43703324-43703456 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 218-351 |
Cow position: | chr1:50045717-50045848 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 218-351 |
Cow position: | chr1:52052804-52052670 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 218-351 |
Cow position: | chr1:99807804-99807669 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 112 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 218-356 |
Cow position: | chr1:89443564-89443426 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 114 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 64, 7 |
Conread position: | 218-357 |
Cow position: | chr1:73196317-73196178 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 218-358 |
Cow position: | chr1:30441873-30442010 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 218-359 |
Cow position: | chr1:2997863-2998003 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 101, 97 |
Conread position: | 218-359 |
Cow position: | chr1:15691250-15691390 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 104 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 218-359 |
Cow position: | chr1:28678438-28678578 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 67, 6 |
Conread position: | 218-359 |
Cow position: | chr1:29975686-29975544 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 115 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 218-359 |
Cow position: | chr1:30066534-30066674 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 64, 80 |
Conread position: | 218-359 |
Cow position: | chr1:50345459-50345601 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 218-359 |
Cow position: | chr1:89548107-89548244 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 99 |
Conread position: | 218-361 |
Cow position: | chr1:63038155-63038301 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 218-363 |
Cow position: | chr1:41735707-41735560 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 219-352 |
Cow position: | chr1:64189415-64189549 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 63, 97 |
Conread position: | 219-359 |
Cow position: | chr1:96192745-96192611 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 66, 42 |
Conread position: | 220-347 |
Cow position: | chr1:35170257-35170380 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 220-358 |
Cow position: | chr1:32341290-32341155 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 63, 46 |
Conread position: | 222-357 |
Cow position: | chr1:10673851-10673986 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 19 |
Conread position: | 223-347 |
Cow position: | chr1:81913233-81913108 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 96 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 224-343 |
Cow position: | chr1:69415790-69415670 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 100 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 224-349 |
Cow position: | chr1:15028672-15028798 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 224-359 |
Cow position: | chr1:76096360-76096494 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 60, 8 |
Conread position: | 225-338 |
Cow position: | chr1:57782928-57783042 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 96 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 225-359 |
Cow position: | chr1:58825465-58825596 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 112 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 60, 18 |
Conread position: | 228-359 |
Cow position: | chr1:99321421-99321291 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 52, 21 |
Conread position: | 231-350 |
Cow position: | chr1:2765341-2765460 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 92 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 239-357 |
Cow position: | chr1:54216953-54217070 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 241-359 |
Cow position: | chr1:5229028-5228910 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 40, 31 |
Conread position: | 243-347 |
Cow position: | chr1:93577348-93577243 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 89 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 243-361 |
Cow position: | chr1:39121898-39121780 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 39, 108 |
Conread position: | 250-359 |
Cow position: | chr1:20581889-20581999 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 265-359 |
Cow position: | chr1:54289231-54289137 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 81 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.