Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056H21.3 |
| Conread position: | 188-352 |
| Cow position: | chr14:37884250-37884410 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 190-357 |
| Cow position: | chr14:19863269-19863438 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 192-338 |
| Cow position: | chr14:21018271-21018123 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 192-338 |
| Cow position: | chr14:26448906-26448761 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 192-342 |
| Cow position: | chr14:27104239-27104087 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 192-343 |
| Cow position: | chr14:38355343-38355197 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 192-347 |
| Cow position: | chr14:34221212-34221059 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 192-351 |
| Cow position: | chr14:23107486-23107324 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 192-351 |
| Cow position: | chr14:31785126-31784965 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 192-352 |
| Cow position: | chr14:19618593-19618751 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 192-352 |
| Cow position: | chr14:26108793-26108632 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 192-357 |
| Cow position: | chr14:43031957-43031791 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 192-363 |
| Cow position: | chr14:25378337-25378507 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 193-351 |
| Cow position: | chr14:25385723-25385886 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 195-359 |
| Cow position: | chr14:20045707-20045543 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 119 |
| Conread position: | 197-341 |
| Cow position: | chr14:35819455-35819602 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 197-352 |
| Cow position: | chr14:11615065-11615221 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 214-347 |
| Cow position: | chr14:22472874-22473008 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 214-351 |
| Cow position: | chr14:37866139-37866273 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 215-352 |
| Cow position: | chr14:24236958-24236825 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-360 |
| Cow position: | chr14:44258059-44257915 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 218-335 |
| Cow position: | chr14:29861001-29860883 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 218-338 |
| Cow position: | chr14:7582320-7582440 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-350 |
| Cow position: | chr14:48412748-48412880 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-352 |
| Cow position: | chr14:47591786-47591914 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 218-357 |
| Cow position: | chr14:28115054-28115192 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 218-359 |
| Cow position: | chr14:14182480-14182337 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 218-359 |
| Cow position: | chr14:37678870-37679011 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-343 |
| Cow position: | chr14:10906845-10906722 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 224-359 |
| Cow position: | chr14:14221897-14221764 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 224-359 |
| Cow position: | chr14:44861110-44861244 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 225-357 |
| Cow position: | chr14:33553309-33553178 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 228-359 |
| Cow position: | chr14:21691151-21691283 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 240-350 |
| Cow position: | chr14:803797-803687 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 245-361 |
| Cow position: | chr14:2189740-2189625 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 247-351 |
| Cow position: | chr14:20429685-20429581 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 251-359 |
| Cow position: | chr14:42848500-42848392 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 80 |
Show alignments to all cow chromosomes.