Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056H21.3 |
| Conread position: | 177-361 |
| Cow position: | chr20:6571241-6571430 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 190-352 |
| Cow position: | chr20:25274365-25274203 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 192-314 |
| Cow position: | chr20:14831685-14831565 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 192-343 |
| Cow position: | chr20:24834022-24834172 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 192-347 |
| Cow position: | chr20:6602967-6603121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 121 |
| Conread position: | 192-352 |
| Cow position: | chr20:12430867-12430711 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 5 |
| Conread position: | 192-359 |
| Cow position: | chr20:20359853-20359690 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 192-359 |
| Cow position: | chr20:25686420-25686256 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 5 |
| Conread position: | 192-363 |
| Cow position: | chr20:10838289-10838116 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 194-349 |
| Cow position: | chr20:22704222-22704377 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 195-359 |
| Cow position: | chr20:17670110-17670276 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 197-358 |
| Cow position: | chr20:32862065-32861904 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 52 |
| Conread position: | 197-359 |
| Cow position: | chr20:26077012-26077174 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 199-357 |
| Cow position: | chr20:20471716-20471875 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 202-361 |
| Cow position: | chr20:21698325-21698488 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 210-358 |
| Cow position: | chr20:24869088-24868940 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 214-352 |
| Cow position: | chr20:6903266-6903399 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 214-352 |
| Cow position: | chr20:40511809-40511671 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 215-357 |
| Cow position: | chr20:35843177-35843036 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 103 |
| Conread position: | 217-357 |
| Cow position: | chr20:9433538-9433677 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 218-336 |
| Cow position: | chr20:14679574-14679692 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-356 |
| Cow position: | chr20:13967306-13967167 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 218-357 |
| Cow position: | chr20:23103173-23103313 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 218-357 |
| Cow position: | chr20:35958599-35958738 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 218-358 |
| Cow position: | chr20:29805708-29805567 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 218-359 |
| Cow position: | chr20:10772157-10772299 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 218-359 |
| Cow position: | chr20:35009790-35009645 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 219-352 |
| Cow position: | chr20:5576727-5576861 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 219-357 |
| Cow position: | chr20:13821627-13821488 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 221-351 |
| Cow position: | chr20:1205976-1205846 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-352 |
| Cow position: | chr20:10759515-10759387 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.