Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056H21.3 |
| Conread position: | 159-338 |
| Cow position: | chr22:9466458-9466639 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 172-352 |
| Cow position: | chr22:15914857-15914676 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 181-359 |
| Cow position: | chr22:139432-139254 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-357 |
| Cow position: | chr22:34618673-34618842 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 191-352 |
| Cow position: | chr22:27224007-27224166 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 192-314 |
| Cow position: | chr22:37554740-37554618 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 192-342 |
| Cow position: | chr22:39293863-39293714 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 192-351 |
| Cow position: | chr22:26184280-26184123 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 192-359 |
| Cow position: | chr22:11778729-11778564 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 192-359 |
| Cow position: | chr22:15358126-15358292 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 67 |
| Conread position: | 192-359 |
| Cow position: | chr22:22997360-22997523 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 192-359 |
| Cow position: | chr22:26264349-26264181 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 192-359 |
| Cow position: | chr22:42612341-42612505 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 196-359 |
| Cow position: | chr22:19653104-19652937 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 197-338 |
| Cow position: | chr22:11257856-11257718 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 197-359 |
| Cow position: | chr22:7301948-7301789 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 199-314 |
| Cow position: | chr22:45931046-45931161 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-342 |
| Cow position: | chr22:33386600-33386475 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 218-344 |
| Cow position: | chr22:15666118-15666245 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 218-351 |
| Cow position: | chr22:11745999-11745865 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 218-352 |
| Cow position: | chr22:1975519-1975653 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-352 |
| Cow position: | chr22:5337693-5337559 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 218-352 |
| Cow position: | chr22:45846053-45846182 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 218-355 |
| Cow position: | chr22:7102741-7102874 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 218-357 |
| Cow position: | chr22:11130775-11130914 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-359 |
| Cow position: | chr22:5928054-5927912 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 218-359 |
| Cow position: | chr22:42605537-42605683 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 218-361 |
| Cow position: | chr22:6574647-6574791 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 219-357 |
| Cow position: | chr22:44180499-44180637 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-359 |
| Cow position: | chr22:5622809-5622670 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 220-350 |
| Cow position: | chr22:19047909-19047778 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 221-357 |
| Cow position: | chr22:36280150-36280287 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 223-352 |
| Cow position: | chr22:21349603-21349476 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 224-338 |
| Cow position: | chr22:14118892-14119006 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-359 |
| Cow position: | chr22:23403734-23403600 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-357 |
| Cow position: | chr22:10553770-10553641 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.