Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056H21.3 |
| Conread position: | 192-336 |
| Cow position: | chr29:13554017-13554165 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 192-348 |
| Cow position: | chr29:1395478-1395633 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 192-349 |
| Cow position: | chr29:38580861-38581017 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 192-350 |
| Cow position: | chr29:356200-356359 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 192-352 |
| Cow position: | chr29:9912056-9912216 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 192-356 |
| Cow position: | chr29:37961094-37960930 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 192-358 |
| Cow position: | chr29:21534793-21534626 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 192-359 |
| Cow position: | chr29:6772016-6772180 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 192-359 |
| Cow position: | chr29:19897492-19897658 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 192-359 |
| Cow position: | chr29:35442578-35442415 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 192-361 |
| Cow position: | chr29:24604264-24604087 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 194-359 |
| Cow position: | chr29:29559832-29559672 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 197-352 |
| Cow position: | chr29:13634414-13634257 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 198-361 |
| Cow position: | chr29:21265648-21265810 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 214-353 |
| Cow position: | chr29:22895625-22895768 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 214-359 |
| Cow position: | chr29:4444619-4444765 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 217-357 |
| Cow position: | chr29:41530755-41530895 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-359 |
| Cow position: | chr29:13127214-13127075 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 218-338 |
| Cow position: | chr29:16055221-16055101 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-339 |
| Cow position: | chr29:32655524-32655402 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 218-342 |
| Cow position: | chr29:23233359-23233483 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-343 |
| Cow position: | chr29:17301438-17301565 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 218-352 |
| Cow position: | chr29:13639461-13639326 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 218-357 |
| Cow position: | chr29:19428568-19428704 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 218-359 |
| Cow position: | chr29:14758953-14758815 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 109 |
| Conread position: | 218-364 |
| Cow position: | chr29:7663362-7663216 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 219-338 |
| Cow position: | chr29:7054330-7054446 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 222-359 |
| Cow position: | chr29:11005644-11005782 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 224-357 |
| Cow position: | chr29:4367637-4367771 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 225-358 |
| Cow position: | chr29:6207980-6208111 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 251-359 |
| Cow position: | chr29:5616928-5616821 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.