Cow genome map
Conread name: | Ss1.1-Pig4-TMW8056H21.3 |
Conread position: | 145-338 |
Cow position: | chrX:6682574-6682779 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 144 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 184-326 |
Cow position: | chrX:28836001-28835859 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 98, 34 |
Conread position: | 186-352 |
Cow position: | chrX:31515074-31515243 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 78, 58 |
Conread position: | 187-359 |
Cow position: | chrX:21664817-21664644 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 136 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 32, 146 |
Conread position: | 187-361 |
Cow position: | chrX:11633586-11633760 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 189-352 |
Cow position: | chrX:36514985-36514824 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 189-357 |
Cow position: | chrX:6041305-6041135 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 190-338 |
Cow position: | chrX:7344997-7345143 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 191-349 |
Cow position: | chrX:40692843-40692685 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 191-351 |
Cow position: | chrX:22326025-22326188 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 13, 130 |
Conread position: | 191-352 |
Cow position: | chrX:19930563-19930720 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 88, 32 |
Conread position: | 191-352 |
Cow position: | chrX:34565191-34565355 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 191-353 |
Cow position: | chrX:8913830-8913994 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 191-353 |
Cow position: | chrX:8915574-8915738 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 191-361 |
Cow position: | chrX:25571085-25570915 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 120 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 91, 6 |
Conread position: | 192-305 |
Cow position: | chrX:488403-488517 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 28, 5 |
Conread position: | 192-338 |
Cow position: | chrX:6563432-6563579 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-338 |
Cow position: | chrX:32743446-32743593 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-344 |
Cow position: | chrX:40642898-40643053 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 192-359 |
Cow position: | chrX:11746758-11746919 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 29, 5 |
Conread position: | 192-359 |
Cow position: | chrX:26493725-26493557 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 25, 5 |
Conread position: | 192-359 |
Cow position: | chrX:27176400-27176236 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 88, 5 |
Conread position: | 192-359 |
Cow position: | chrX:27287822-27287660 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 26, 5 |
Conread position: | 192-359 |
Cow position: | chrX:28111418-28111586 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-359 |
Cow position: | chrX:29032321-29032487 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 192-360 |
Cow position: | chrX:25338095-25338265 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 192-361 |
Cow position: | chrX:24259670-24259503 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 193-351 |
Cow position: | chrX:43426203-43426363 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 32, 103 |
Conread position: | 193-352 |
Cow position: | chrX:24132239-24132081 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 26, 93 |
Conread position: | 193-359 |
Cow position: | chrX:21566319-21566483 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 89, 23 |
Conread position: | 194-363 |
Cow position: | chrX:20376880-20377051 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 19, 33 |
Conread position: | 197-359 |
Cow position: | chrX:7497154-7497319 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 197-359 |
Cow position: | chrX:36009996-36009836 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 197-363 |
Cow position: | chrX:25441079-25440918 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 20, 79 |
Conread position: | 209-359 |
Cow position: | chrX:31260699-31260543 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 210-359 |
Cow position: | chrX:6203474-6203617 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 109, 41 |
Conread position: | 210-366 |
Cow position: | chrX:32623496-32623654 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 115 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 214-351 |
Cow position: | chrX:17630873-17630735 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 114 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 214-352 |
Cow position: | chrX:32310038-32310174 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 116 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 68, 10 |
Conread position: | 214-352 |
Cow position: | chrX:39126265-39126395 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 214-358 |
Cow position: | chrX:6656316-6656458 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 114 |
Conread position: | 215-352 |
Cow position: | chrX:10959463-10959326 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 49, 81 |
Conread position: | 218-346 |
Cow position: | chrX:25232528-25232656 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 109 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 218-350 |
Cow position: | chrX:1616107-1615976 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 62, 109 |
Conread position: | 218-352 |
Cow position: | chrX:29120983-29121116 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 100 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 218-352 |
Cow position: | chrX:29680323-29680192 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 218-352 |
Cow position: | chrX:39415429-39415301 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 114 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 218-357 |
Cow position: | chrX:1499604-1499739 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 90, 25 |
Conread position: | 218-357 |
Cow position: | chrX:11313846-11313706 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 218-357 |
Cow position: | chrX:29601893-29601754 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 218-357 |
Cow position: | chrX:38964042-38964182 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 218-359 |
Cow position: | chrX:5638231-5638093 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 218-359 |
Cow position: | chrX:11717851-11717707 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 218-359 |
Cow position: | chrX:27450061-27449922 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 218-359 |
Cow position: | chrX:32431558-32431700 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 218-359 |
Cow position: | chrX:39546037-39545903 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 218-361 |
Cow position: | chrX:46072883-46072739 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 75, 67 |
Conread position: | 218-366 |
Cow position: | chrX:11589650-11589505 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 109 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 219-349 |
Cow position: | chrX:38654494-38654364 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 97 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 219-351 |
Cow position: | chrX:42500440-42500566 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 220-359 |
Cow position: | chrX:42011218-42011357 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 221-337 |
Cow position: | chrX:30862253-30862370 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 224-338 |
Cow position: | chrX:16514321-16514207 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 97 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 62, 94 |
Conread position: | 224-341 |
Cow position: | chrX:38999798-38999914 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 224-343 |
Cow position: | chrX:6633021-6633140 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 224-359 |
Cow position: | chrX:3154300-3154166 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 112 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 39, 21 |
Conread position: | 224-359 |
Cow position: | chrX:9539267-9539399 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 59, 114 |
Conread position: | 225-357 |
Cow position: | chrX:17541902-17542034 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 225-358 |
Cow position: | chrX:23414428-23414293 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 225-359 |
Cow position: | chrX:630364-630233 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 226-357 |
Cow position: | chrX:27680340-27680472 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 229-359 |
Cow position: | chrX:29408077-29407946 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 237-347 |
Cow position: | chrX:6367820-6367716 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 243-352 |
Cow position: | chrX:7806385-7806495 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 95 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 243-357 |
Cow position: | chrX:41733245-41733125 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 81, 32 |
Conread position: | 247-357 |
Cow position: | chrX:8097464-8097354 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 87 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 251-359 |
Cow position: | chrX:46612746-46612638 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 86 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.