Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056I07.5.5 |
| Conread position: | 1-145 |
| Cow position: | chr5:16395804-16395948 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 132 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-337 |
| Cow position: | chr5:16396223-16396415 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-485 |
| Cow position: | chr5:16396855-16396959 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-696 |
| Cow position: | chr5:16397339-16397499 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 696-836 |
| Cow position: | chr5:16397813-16397952 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 129 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 834-904 |
| Cow position: | chr5:16398080-16398150 (view UCSC Genome Browser custom track) |
| Alignm length: | 71 |
| Alignm identity: | 68 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 903-1054 |
| Cow position: | chr5:16398497-16398648 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1054-1147 |
| Cow position: | chr5:16398733-16398826 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1148-1227 |
| Cow position: | chr5:16398944-16399023 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1222-1309 |
| Cow position: | chr5:16399109-16399196 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1310-1414 |
| Cow position: | chr5:16399309-16399413 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1413-1570 |
| Cow position: | chr5:16399765-16399922 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1651-1768 |
| Cow position: | chr5:16401235-16401352 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1766-1872 |
| Cow position: | chr5:16401979-16402085 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1868-1996 |
| Cow position: | chr5:16402616-16402744 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 120 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1992-3080 |
| Cow position: | chr5:16403327-16404421 (view UCSC Genome Browser custom track) |
| Alignm length: | 1114 |
| Alignm identity: | 991 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 95 |
Show alignments to all cow chromosomes.