Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056N24.5
        

               Conread position:
               603-867
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               604-1032
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 43
               

               Conread position:
               614-870
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 92
               

               Conread position:
               616-988
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 40
               

               Conread position:
               619-987
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 35
               

               Conread position:
               621-857
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               5, 98
               

               Conread position:
               626-870
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               626-890
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               220, 6
               

               Conread position:
               626-974
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               631-867
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               631-890
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               209, 59
               

               Conread position:
               631-987
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               631-1032
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               632-868
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               171, 44
               

               Conread position:
               632-965
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 172
               

               Conread position:
               632-965
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 172
               

               Conread position:
               632-1032
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               635-1032
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               639-866
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               644-989
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               644-1032
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               645-1032
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               650-1032
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               651-989
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               307, 26
               

               Conread position:
               651-1032
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               655-931
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               659-804
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               659-868
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               181, 29
               

               Conread position:
               659-890
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               660-870
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               661-916
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               662-838
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               681-1032
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               687-867
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               687-1032
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               688-838
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               688-867
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               158, 16
               

               Conread position:
               689-889
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               185, 15
               

               Conread position:
               689-1032
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               157, 15
               

               Conread position:
               690-890
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               691-867
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               693-890
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               178, 11
               

               Conread position:
               694-872
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               695-987
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 66
               

               Conread position:
               695-1029
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               185, 68
               

               Conread position:
               696-1032
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               304, 13
               

               Conread position:
               699-889
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               700-890
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 112
               

               Conread position:
               701-866
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               704-1032
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               229, 135
               

               Conread position:
               704-1032
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 170
               

               Conread position:
               709-862
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               711-890
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               128, 7
               

               Conread position:
               713-970
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               723-1028
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               117, 95
               

               Conread position:
               726-890
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 106
               

               Conread position:
               738-1032
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               102, 146
               

               Conread position:
               759-1032
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               92, 114
               

               Conread position:
               805-994
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               859-1032
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               874-1029
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               880-1028
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               889-1028
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               896-1032
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               112, 9
               
Show alignments to all cow chromosomes.