Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
| Conread position: | 573-831 |
| Cow position: | chr14:8458029-8458303 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 616-1032 |
| Cow position: | chr14:1858347-1857945 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 38 |
| Conread position: | 616-1032 |
| Cow position: | chr14:37249956-37249558 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 224, 37 |
| Conread position: | 627-856 |
| Cow position: | chr14:13722533-13722308 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 627-1032 |
| Cow position: | chr14:25503384-25502984 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 628-1032 |
| Cow position: | chr14:33436600-33436191 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 631-1028 |
| Cow position: | chr14:7115703-7116108 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 631-1032 |
| Cow position: | chr14:16517716-16517339 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 209, 17 |
| Conread position: | 634-902 |
| Cow position: | chr14:38359743-38359481 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 636-878 |
| Cow position: | chr14:50468841-50468599 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 210, 20 |
| Conread position: | 639-1029 |
| Cow position: | chr14:23149678-23150064 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 645-836 |
| Cow position: | chr14:18439137-18439329 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 647-1032 |
| Cow position: | chr14:12246572-12246945 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 649-852 |
| Cow position: | chr14:33534569-33534371 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 651-1029 |
| Cow position: | chr14:20690494-20690113 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 655-1032 |
| Cow position: | chr14:18579082-18579446 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 53 |
| Conread position: | 655-1032 |
| Cow position: | chr14:23148666-23149027 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 656-890 |
| Cow position: | chr14:1068786-1068549 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 8 |
| Conread position: | 658-869 |
| Cow position: | chr14:17394585-17394800 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 659-870 |
| Cow position: | chr14:45733768-45733973 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 659-890 |
| Cow position: | chr14:19838448-19838679 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 659-890 |
| Cow position: | chr14:32728936-32728713 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 659-891 |
| Cow position: | chr14:45594390-45594622 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 660-987 |
| Cow position: | chr14:11076188-11075875 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 277, 30 |
| Conread position: | 663-864 |
| Cow position: | chr14:16026508-16026309 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 666-978 |
| Cow position: | chr14:44539423-44539122 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 687-890 |
| Cow position: | chr14:13153453-13153247 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 687-978 |
| Cow position: | chr14:47152015-47151725 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 688-867 |
| Cow position: | chr14:10488998-10488817 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 688-959 |
| Cow position: | chr14:4722365-4722639 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 172, 18 |
| Conread position: | 689-870 |
| Cow position: | chr14:7149467-7149289 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 690-891 |
| Cow position: | chr14:34096985-34097185 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 178 |
| Conread position: | 690-1028 |
| Cow position: | chr14:10082064-10081731 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 694-1022 |
| Cow position: | chr14:5357095-5356774 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 146, 10 |
| Conread position: | 696-1029 |
| Cow position: | chr14:20808369-20808038 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 702-1032 |
| Cow position: | chr14:26040534-26040853 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 171 |
| Conread position: | 707-1032 |
| Cow position: | chr14:15756890-15756575 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 133, 166 |
| Conread position: | 707-1032 |
| Cow position: | chr14:20887595-20887288 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 714-865 |
| Cow position: | chr14:8037381-8037232 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 714-890 |
| Cow position: | chr14:3703110-3703289 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 126, 40 |
| Conread position: | 715-1032 |
| Cow position: | chr14:5569877-5570183 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 131, 168 |
| Conread position: | 719-1032 |
| Cow position: | chr14:45779981-45780282 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 727-1024 |
| Cow position: | chr14:43375614-43375900 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 11, 134 |
| Conread position: | 727-1032 |
| Cow position: | chr14:20883146-20883439 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 115 |
| Conread position: | 731-864 |
| Cow position: | chr14:23880589-23880456 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 737-1029 |
| Cow position: | chr14:36357766-36358057 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 179, 67 |
| Conread position: | 738-1028 |
| Cow position: | chr14:12676227-12676517 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 260, 146 |
| Conread position: | 752-870 |
| Cow position: | chr14:20887795-20887914 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 890-1032 |
| Cow position: | chr14:34097401-34097541 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 13 |
Show alignments to all cow chromosomes.