Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056N24.5
        

               Conread position:
               573-831
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               616-1032
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 38
               

               Conread position:
               616-1032
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               224, 37
               

               Conread position:
               627-856
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               627-1032
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               628-1032
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               631-1028
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               631-1032
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               209, 17
               

               Conread position:
               634-902
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               636-878
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               210, 20
               

               Conread position:
               639-1029
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               645-836
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               647-1032
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               649-852
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               651-1029
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               655-1032
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 53
               

               Conread position:
               655-1032
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               656-890
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               658-869
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               659-870
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               659-890
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               659-890
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               659-891
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               660-987
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               277, 30
               

               Conread position:
               663-864
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               666-978
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               687-890
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               687-978
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 37
               

               Conread position:
               688-867
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               688-959
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               689-870
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               690-891
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 178
               

               Conread position:
               690-1028
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               694-1022
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               146, 10
               

               Conread position:
               696-1029
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               702-1032
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               143, 171
               

               Conread position:
               707-1032
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               133, 166
               

               Conread position:
               707-1032
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               714-865
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               714-890
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               126, 40
               

               Conread position:
               715-1032
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               131, 168
               

               Conread position:
               719-1032
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 123
               

               Conread position:
               727-1024
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               727-1032
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 115
               

               Conread position:
               731-864
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               7, 81
               

               Conread position:
               737-1029
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               179, 67
               

               Conread position:
               738-1028
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               260, 146
               

               Conread position:
               752-870
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               890-1032
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 13
               
Show alignments to all cow chromosomes.