Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056N24.5
        

               Conread position:
               572-868
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               575-862
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               618-1032
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               620-1032
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               621-861
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               621-1028
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 33
               

               Conread position:
               621-1029
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               621-1032
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               626-890
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 34
               

               Conread position:
               626-898
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               214, 34
               

               Conread position:
               627-825
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               627-878
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               632-838
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               632-989
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               632-1032
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 22
               

               Conread position:
               637-1026
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 110
               

               Conread position:
               640-838
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               648-890
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               653-978
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               654-1029
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               658-870
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               659-838
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               659-863
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               659-867
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               181, 31
               

               Conread position:
               659-870
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               659-1032
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               181, 29
               

               Conread position:
               660-838
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               660-874
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               687-878
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               153, 21
               

               Conread position:
               687-890
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               153, 17
               

               Conread position:
               688-989
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               688-1032
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 80
               

               Conread position:
               689-890
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               690-1032
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               245, 14
               

               Conread position:
               694-843
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               694-1032
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               301, 12
               

               Conread position:
               701-1032
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 67
               

               Conread position:
               702-893
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 116
               

               Conread position:
               702-1032
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 197
               

               Conread position:
               706-834
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               707-866
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               708-1029
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               708-1032
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               132, 165
               

               Conread position:
               709-1032
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               713-870
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               718-1032
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 175
               

               Conread position:
               720-870
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               725-1032
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 73
               

               Conread position:
               726-890
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               727-1032
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               159, 145
               

               Conread position:
               732-865
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               734-1032
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               278, 133
               

               Conread position:
               735-1026
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               738-1016
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               757-1003
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               758-1032
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               82, 109
               

               Conread position:
               787-1018
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               168, 80
               

               Conread position:
               804-1026
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               43, 134
               

               Conread position:
               835-1032
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 91
               

               Conread position:
               892-1032
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.