Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
| Conread position: | 616-770 |
| Cow position: | chr19:28447838-28447688 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 619-811 |
| Cow position: | chr19:2156139-2156327 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 620-844 |
| Cow position: | chr19:53630031-53629808 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 621-870 |
| Cow position: | chr19:22428861-22429110 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 621-1029 |
| Cow position: | chr19:26393392-26392984 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 622-983 |
| Cow position: | chr19:44338889-44339232 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 629-855 |
| Cow position: | chr19:28339712-28339939 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 631-961 |
| Cow position: | chr19:11076655-11076340 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 215, 57 |
| Conread position: | 631-1017 |
| Cow position: | chr19:25104-25513 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 639-838 |
| Cow position: | chr19:4519832-4520034 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 659-822 |
| Cow position: | chr19:10619736-10619575 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 659-846 |
| Cow position: | chr19:47325834-47325651 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 659-1027 |
| Cow position: | chr19:53634226-53634582 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 659-1032 |
| Cow position: | chr19:15972216-15971856 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 181, 29 |
| Conread position: | 660-1029 |
| Cow position: | chr19:11784443-11784080 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 661-838 |
| Cow position: | chr19:11079048-11079225 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 687-1032 |
| Cow position: | chr19:20609862-20609528 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 256, 17 |
| Conread position: | 688-865 |
| Cow position: | chr19:11590140-11589965 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 688-1032 |
| Cow position: | chr19:11973619-11973286 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 689-1032 |
| Cow position: | chr19:28448033-28448370 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 695-870 |
| Cow position: | chr19:51647592-51647415 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 701-868 |
| Cow position: | chr19:28610442-28610281 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 701-868 |
| Cow position: | chr19:55149751-55149916 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 717-1032 |
| Cow position: | chr19:43551297-43550986 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 32 |
| Conread position: | 725-1025 |
| Cow position: | chr19:16520548-16520252 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 172, 63 |
| Conread position: | 734-1028 |
| Cow position: | chr19:9903685-9903974 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 169 |
| Conread position: | 758-1032 |
| Cow position: | chr19:14424913-14424652 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 872-1032 |
| Cow position: | chr19:28339904-28340065 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 7 |
Show alignments to all cow chromosomes.