Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
| Conread position: | 616-1032 |
| Cow position: | chr20:11065491-11065904 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 32 |
| Conread position: | 616-1032 |
| Cow position: | chr20:19121191-19121595 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 619-1028 |
| Cow position: | chr20:7776679-7777077 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 627-970 |
| Cow position: | chr20:33705412-33705066 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 29 |
| Conread position: | 627-1024 |
| Cow position: | chr20:37934909-37934527 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 631-890 |
| Cow position: | chr20:5540924-5540665 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 636-1019 |
| Cow position: | chr20:32893783-32894163 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 639-810 |
| Cow position: | chr20:33190617-33190790 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 640-1025 |
| Cow position: | chr20:30154083-30154452 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 644-1032 |
| Cow position: | chr20:35815779-35815407 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 647-1032 |
| Cow position: | chr20:39973438-39973799 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 659-868 |
| Cow position: | chr20:26055724-26055934 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 659-1032 |
| Cow position: | chr20:34964832-34964469 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 659-1032 |
| Cow position: | chr20:37071242-37071608 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 661-1032 |
| Cow position: | chr20:20071126-20071471 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 680-890 |
| Cow position: | chr20:42107615-42107820 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 171, 8 |
| Conread position: | 687-867 |
| Cow position: | chr20:23913292-23913471 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 688-890 |
| Cow position: | chr20:18784174-18783979 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 689-890 |
| Cow position: | chr20:24000307-24000507 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 691-978 |
| Cow position: | chr20:12983561-12983843 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 693-1030 |
| Cow position: | chr20:39354503-39354160 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 11 |
| Conread position: | 694-1032 |
| Cow position: | chr20:20768829-20768509 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 695-1029 |
| Cow position: | chr20:13357912-13358238 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 20 |
| Conread position: | 699-831 |
| Cow position: | chr20:3053943-3054076 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 699-1032 |
| Cow position: | chr20:3057289-3057607 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 236, 18 |
| Conread position: | 707-890 |
| Cow position: | chr20:11066683-11066505 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 10 |
| Conread position: | 707-890 |
| Cow position: | chr20:16970580-16970761 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 707-978 |
| Cow position: | chr20:18828627-18828883 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 708-866 |
| Cow position: | chr20:4624247-4624401 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 730-887 |
| Cow position: | chr20:38058620-38058776 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 734-861 |
| Cow position: | chr20:26455262-26455387 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 751-890 |
| Cow position: | chr20:2885732-2885873 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 757-1029 |
| Cow position: | chr20:23999072-23999329 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 177, 115 |
| Conread position: | 802-1019 |
| Cow position: | chr20:42920255-42920461 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 41 |
Show alignments to all cow chromosomes.