Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056N24.5
        

               Conread position:
               589-870
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 82
               

               Conread position:
               621-978
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               621-1006
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 35
               

               Conread position:
               628-924
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 56
               

               Conread position:
               630-894
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               210, 58
               

               Conread position:
               631-1032
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               631-1032
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               631-1032
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               208, 23
               

               Conread position:
               632-870
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               637-887
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               639-870
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               641-870
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               644-860
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               644-1030
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               645-1032
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               647-890
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               224, 13
               

               Conread position:
               647-1032
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               652-1028
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               169, 26
               

               Conread position:
               654-890
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               655-878
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               185, 53
               

               Conread position:
               658-1028
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               182, 30
               

               Conread position:
               658-1032
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               659-838
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               659-844
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               659-870
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               659-1028
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               659-1032
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               660-801
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               680-890
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               687-990
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 208
               

               Conread position:
               687-1032
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               688-816
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               689-890
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               689-1032
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               690-870
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               692-1032
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               693-1029
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               694-1032
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               147, 14
               

               Conread position:
               694-1032
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               695-978
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               152, 125
               

               Conread position:
               700-845
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               701-991
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               122, 143
               

               Conread position:
               702-806
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               702-870
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               702-890
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               702-890
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               710-870
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               718-871
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               133, 113
               

               Conread position:
               718-890
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               718-1025
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               217, 83
               

               Conread position:
               722-1032
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               118, 82
               

               Conread position:
               724-977
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 145
               

               Conread position:
               734-853
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               737-890
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               103, 9
               

               Conread position:
               738-890
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               741-1028
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               163, 122
               

               Conread position:
               741-1032
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 62
               

               Conread position:
               747-967
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 121
               
Show alignments to all cow chromosomes.