Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
| Conread position: | 604-869 |
| Cow position: | chr22:40281980-40281722 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 231, 49 |
| Conread position: | 619-1032 |
| Cow position: | chr22:6238996-6238608 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 620-878 |
| Cow position: | chr22:3044796-3045047 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 229, 34 |
| Conread position: | 631-845 |
| Cow position: | chr22:21169898-21169686 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 631-890 |
| Cow position: | chr22:17375067-17374809 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 643-870 |
| Cow position: | chr22:25588284-25588060 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 645-890 |
| Cow position: | chr22:20078160-20077911 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 647-839 |
| Cow position: | chr22:3467135-3467322 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 647-1032 |
| Cow position: | chr22:14447599-14447229 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 190, 13 |
| Conread position: | 648-1029 |
| Cow position: | chr22:894392-894028 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 653-890 |
| Cow position: | chr22:23071374-23071132 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 654-978 |
| Cow position: | chr22:13513438-13513131 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 659-890 |
| Cow position: | chr22:6439017-6438787 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 181, 27 |
| Conread position: | 659-989 |
| Cow position: | chr22:35460258-35459940 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 660-878 |
| Cow position: | chr22:23086260-23086473 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 214, 28 |
| Conread position: | 663-837 |
| Cow position: | chr22:41957867-41957694 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 663-1032 |
| Cow position: | chr22:6930623-6930267 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 665-989 |
| Cow position: | chr22:39648316-39648622 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 183 |
| Conread position: | 680-867 |
| Cow position: | chr22:21165012-21164825 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 155, 8 |
| Conread position: | 687-866 |
| Cow position: | chr22:14244488-14244310 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 694-1032 |
| Cow position: | chr22:15682371-15682697 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 703-978 |
| Cow position: | chr22:32038400-32038136 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 713-890 |
| Cow position: | chr22:35892960-35892781 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 714-890 |
| Cow position: | chr22:32126704-32126525 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 732-865 |
| Cow position: | chr22:15432163-15432295 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 737-857 |
| Cow position: | chr22:29193290-29193169 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 747-976 |
| Cow position: | chr22:6044278-6044057 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.