Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
| Conread position: | 604-817 |
| Cow position: | chr25:18455842-18456042 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 616-963 |
| Cow position: | chr25:20193156-20193494 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 619-851 |
| Cow position: | chr25:31115056-31115266 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 619-1032 |
| Cow position: | chr25:24750362-24750765 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 233 |
| Conread position: | 625-931 |
| Cow position: | chr25:19431666-19431967 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 630-991 |
| Cow position: | chr25:21364723-21364370 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 631-870 |
| Cow position: | chr25:21138135-21137899 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 631-1023 |
| Cow position: | chr25:16129449-16129070 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 631-1032 |
| Cow position: | chr25:34420300-34420677 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 642-890 |
| Cow position: | chr25:5774476-5774227 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 644-954 |
| Cow position: | chr25:21036872-21036574 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 651-1032 |
| Cow position: | chr25:20645673-20646043 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 659-1032 |
| Cow position: | chr25:2497538-2497181 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 659-1032 |
| Cow position: | chr25:11263109-11263473 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 660-1032 |
| Cow position: | chr25:21321057-21320699 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 674-870 |
| Cow position: | chr25:23821103-23821291 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 680-870 |
| Cow position: | chr25:26313758-26313947 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 160, 8 |
| Conread position: | 680-1032 |
| Cow position: | chr25:20255293-20255630 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 689-890 |
| Cow position: | chr25:26236758-26236559 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 689-1032 |
| Cow position: | chr25:11411462-11411132 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 689-1032 |
| Cow position: | chr25:13492694-13492352 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 701-1032 |
| Cow position: | chr25:21516442-21516760 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 45 |
| Conread position: | 702-870 |
| Cow position: | chr25:7510305-7510134 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 706-977 |
| Cow position: | chr25:21516768-21517024 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 707-1032 |
| Cow position: | chr25:17390176-17389864 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 133, 8 |
| Conread position: | 720-890 |
| Cow position: | chr25:8976211-8976382 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 144 |
| Conread position: | 720-1027 |
| Cow position: | chr25:32663825-32663529 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 125, 154 |
| Conread position: | 724-1028 |
| Cow position: | chr25:6932801-6932512 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 105 |
| Conread position: | 734-1028 |
| Cow position: | chr25:35401143-35401421 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.