Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
| Conread position: | 597-985 |
| Cow position: | chr27:3978084-3978489 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 619-892 |
| Cow position: | chr27:29665220-29665500 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 619-1030 |
| Cow position: | chr27:28157621-28158029 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 621-802 |
| Cow position: | chr27:17826694-17826516 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 630-1032 |
| Cow position: | chr27:18673239-18673623 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 631-865 |
| Cow position: | chr27:23996611-23996378 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 631-1032 |
| Cow position: | chr27:5486222-5486607 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 209, 57 |
| Conread position: | 637-833 |
| Cow position: | chr27:23087659-23087463 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 643-1029 |
| Cow position: | chr27:23089543-23089923 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 644-989 |
| Cow position: | chr27:15511659-15511982 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 646-1032 |
| Cow position: | chr27:26071913-26072278 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 659-870 |
| Cow position: | chr27:4496628-4496837 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 661-868 |
| Cow position: | chr27:22218733-22218527 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 673-893 |
| Cow position: | chr27:7148058-7148276 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 197, 31 |
| Conread position: | 689-866 |
| Cow position: | chr27:30992618-30992446 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 689-888 |
| Cow position: | chr27:12474575-12474382 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 152, 86 |
| Conread position: | 694-897 |
| Cow position: | chr27:7139660-7139863 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 142, 10 |
| Conread position: | 694-1032 |
| Cow position: | chr27:20009643-20009970 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 315, 12 |
| Conread position: | 699-978 |
| Cow position: | chr27:4252726-4252995 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 203, 25 |
| Conread position: | 701-851 |
| Cow position: | chr27:16587719-16587569 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 702-1032 |
| Cow position: | chr27:5095896-5096206 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 707-1032 |
| Cow position: | chr27:23914417-23914102 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 718-834 |
| Cow position: | chr27:23064310-23064426 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 722-870 |
| Cow position: | chr27:18731487-18731339 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 723-870 |
| Cow position: | chr27:28546657-28546510 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 723-1032 |
| Cow position: | chr27:31545659-31545358 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 113, 51 |
| Conread position: | 738-865 |
| Cow position: | chr27:7635407-7635536 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 790-1029 |
| Cow position: | chr27:17825954-17825704 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 812-1032 |
| Cow position: | chr27:17783381-17783605 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 116 |
Show alignments to all cow chromosomes.