Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056N24.5
        

               Conread position:
               572-1032
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               604-895
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               116, 44
               

               Conread position:
               616-754
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               616-991
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               619-791
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               619-943
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               619-1032
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               621-1032
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               628-970
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 26
               

               Conread position:
               631-963
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               91, 22
               

               Conread position:
               631-1028
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               634-870
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               635-807
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 122
               

               Conread position:
               635-818
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               639-866
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               644-867
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 162
               

               Conread position:
               644-1029
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               644-1032
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               644-1032
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               645-1026
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               646-852
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               646-1032
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               647-844
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               648-853
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               648-890
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               650-1029
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               654-989
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               150, 26
               

               Conread position:
               659-838
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               659-866
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               181, 22
               

               Conread position:
               659-890
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               659-890
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               659-1032
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               659-1032
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               659-1032
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               660-838
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               660-869
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               668-1032
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               152, 23
               

               Conread position:
               679-991
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               127, 134
               

               Conread position:
               680-818
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               687-1032
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               153, 17
               

               Conread position:
               690-869
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               690-1029
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               694-1032
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               275, 14
               

               Conread position:
               695-890
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               695-925
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               718-890
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               153, 122
               

               Conread position:
               720-1027
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               96, 84
               

               Conread position:
               722-844
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               722-1028
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               182, 110
               

               Conread position:
               723-866
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               725-870
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               725-1032
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 115
               

               Conread position:
               725-1032
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               168, 159
               

               Conread position:
               729-1029
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               729-1032
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               731-891
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               731-1032
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               732-1032
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               6, 57
               

               Conread position:
               733-1029
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               138, 116
               

               Conread position:
               751-867
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               757-890
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               761-1026
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               762-1015
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               218, 86
               

               Conread position:
               791-1032
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               805-1028
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               192, 76
               
Show alignments to all cow chromosomes.