Cow genome map
Conread name: | Ss1.1-Pig4-TMW8056N24.5 |
Conread position: | 616-817 |
Cow position: | chr4:181492-181692 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 143 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 70, 38 |
Conread position: | 616-836 |
Cow position: | chr4:166054-165838 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 16 |
Conread position: | 616-869 |
Cow position: | chr4:59577951-59577697 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 191 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 103, 38 |
Conread position: | 616-887 |
Cow position: | chr4:64963579-64963308 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 38 |
Conread position: | 616-992 |
Cow position: | chr4:36506015-36505646 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 33 |
Conread position: | 616-1032 |
Cow position: | chr4:3901595-3902000 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 270 |
Conread position: | 616-1032 |
Cow position: | chr4:37857574-37857151 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 241 |
Conread position: | 616-1032 |
Cow position: | chr4:59858266-59857868 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 23 |
Conread position: | 618-1024 |
Cow position: | chr4:32844146-32843761 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 170 |
Conread position: | 619-838 |
Cow position: | chr4:4020963-4020750 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 157 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 66, 13 |
Conread position: | 619-1028 |
Cow position: | chr4:62831550-62831953 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 288 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 221, 73 |
Conread position: | 630-892 |
Cow position: | chr4:5207775-5208036 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 173 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 46 |
Conread position: | 630-1032 |
Cow position: | chr4:38951855-38951447 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 24 |
Conread position: | 631-840 |
Cow position: | chr4:42365007-42364801 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 153 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 8 |
Conread position: | 631-890 |
Cow position: | chr4:57643829-57644084 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 178 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 12, 61 |
Conread position: | 631-978 |
Cow position: | chr4:4126074-4125749 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 249 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 631-1032 |
Cow position: | chr4:30017055-30016666 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 273 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 11, 77 |
Conread position: | 631-1032 |
Cow position: | chr4:63549123-63548729 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 23 |
Conread position: | 632-802 |
Cow position: | chr4:44754108-44754276 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 54, 44 |
Conread position: | 636-1032 |
Cow position: | chr4:44425362-44425750 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 273 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 67, 24 |
Conread position: | 640-1032 |
Cow position: | chr4:33002413-33002795 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 264 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 76, 48 |
Conread position: | 644-1032 |
Cow position: | chr4:45382912-45383287 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 65 |
Conread position: | 645-893 |
Cow position: | chr4:23681348-23681106 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 142, 43 |
Conread position: | 648-866 |
Cow position: | chr4:40249786-40249565 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 165 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 27, 51 |
Conread position: | 654-1032 |
Cow position: | chr4:16942387-16942004 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 32 |
Conread position: | 654-1032 |
Cow position: | chr4:18797748-18797379 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 264 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 30, 51 |
Conread position: | 656-1032 |
Cow position: | chr4:23612890-23613264 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 276 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 61, 53 |
Conread position: | 658-1029 |
Cow position: | chr4:39338347-39337978 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 256 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 57, 30 |
Conread position: | 659-859 |
Cow position: | chr4:58789788-58789982 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 31 |
Conread position: | 659-878 |
Cow position: | chr4:29232248-29232466 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 30, 11 |
Conread position: | 659-1028 |
Cow position: | chr4:43563814-43563464 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 248 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 17, 26 |
Conread position: | 659-1028 |
Cow position: | chr4:43566926-43566576 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 248 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 17, 26 |
Conread position: | 659-1032 |
Cow position: | chr4:18283793-18283433 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 263 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 64, 29 |
Conread position: | 660-890 |
Cow position: | chr4:49764928-49765163 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 168 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 25, 49 |
Conread position: | 660-1032 |
Cow position: | chr4:35070241-35070602 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 258 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 56, 28 |
Conread position: | 661-1028 |
Cow position: | chr4:43283684-43284043 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 667-1029 |
Cow position: | chr4:55648202-55647868 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 244 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 173, 37 |
Conread position: | 680-844 |
Cow position: | chr4:39337157-39337322 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 36, 8 |
Conread position: | 680-1032 |
Cow position: | chr4:25188782-25189117 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 250 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 46, 10 |
Conread position: | 683-846 |
Cow position: | chr4:58787390-58787228 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 687-853 |
Cow position: | chr4:53264825-53264992 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 36, 21 |
Conread position: | 687-889 |
Cow position: | chr4:565270-565066 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 152 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 81, 17 |
Conread position: | 689-1032 |
Cow position: | chr4:54377701-54377374 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 15 |
Conread position: | 690-839 |
Cow position: | chr4:4031941-4032088 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 694-1032 |
Cow position: | chr4:54379035-54379360 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 241 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 152, 12 |
Conread position: | 701-888 |
Cow position: | chr4:54355874-54355685 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 138 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 23, 13 |
Conread position: | 702-890 |
Cow position: | chr4:52516627-52516821 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 704-890 |
Cow position: | chr4:59265710-59265532 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 12 |
Conread position: | 705-1032 |
Cow position: | chr4:37548715-37548400 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 13 |
Conread position: | 708-989 |
Cow position: | chr4:29119375-29119640 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 201 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 132, 165 |
Conread position: | 713-973 |
Cow position: | chr4:1226614-1226370 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 191 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 716-1029 |
Cow position: | chr4:14422543-14422226 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 227 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 14, 162 |
Conread position: | 721-890 |
Cow position: | chr4:28227524-28227356 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 150, 7 |
Conread position: | 723-982 |
Cow position: | chr4:14947332-14947576 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 186 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 123, 74 |
Conread position: | 724-890 |
Cow position: | chr4:17094088-17093922 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 114, 148 |
Conread position: | 725-894 |
Cow position: | chr4:25153097-25153265 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 134 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 725-1032 |
Cow position: | chr4:56263779-56263490 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 218 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 273, 110 |
Conread position: | 727-880 |
Cow position: | chr4:3899226-3899371 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 10, 40 |
Conread position: | 730-864 |
Cow position: | chr4:60499792-60499927 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 730-1032 |
Cow position: | chr4:32803627-32803913 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 111, 33 |
Conread position: | 734-990 |
Cow position: | chr4:39086524-39086272 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 125, 14 |
Conread position: | 737-1032 |
Cow position: | chr4:32713355-32713629 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 134, 102 |
Conread position: | 740-1032 |
Cow position: | chr4:43703853-43704145 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 74, 104 |
Conread position: | 758-1029 |
Cow position: | chr4:37343344-37343605 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 195 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 88, 115 |
Conread position: | 760-865 |
Cow position: | chr4:39001692-39001587 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 87 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 805-1032 |
Cow position: | chr4:20475695-20475464 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 182 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 21, 101 |
Conread position: | 861-1032 |
Cow position: | chr4:59577493-59577326 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 148, 28 |
Show alignments to all cow chromosomes.