Cow genome map

Conread name: Ss1.1-Pig4-TMW8056N24.5

Conread position: 616-817
Cow position: chr4:181492-181692 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 38

Conread position: 616-836
Cow position: chr4:166054-165838 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 16

Conread position: 616-869
Cow position: chr4:59577951-59577697 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 103, 38

Conread position: 616-887
Cow position: chr4:64963579-64963308 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 616-992
Cow position: chr4:36506015-36505646 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 616-1032
Cow position: chr4:3901595-3902000 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 616-1032
Cow position: chr4:37857574-37857151 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 241

Conread position: 616-1032
Cow position: chr4:59858266-59857868 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 618-1024
Cow position: chr4:32844146-32843761 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 170

Conread position: 619-838
Cow position: chr4:4020963-4020750 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 13

Conread position: 619-1028
Cow position: chr4:62831550-62831953 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 221, 73

Conread position: 630-892
Cow position: chr4:5207775-5208036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 46

Conread position: 630-1032
Cow position: chr4:38951855-38951447 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 24

Conread position: 631-840
Cow position: chr4:42365007-42364801 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 8

Conread position: 631-890
Cow position: chr4:57643829-57644084 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 61

Conread position: 631-978
Cow position: chr4:4126074-4125749 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 631-1032
Cow position: chr4:30017055-30016666 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 77

Conread position: 631-1032
Cow position: chr4:63549123-63548729 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 632-802
Cow position: chr4:44754108-44754276 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 44

Conread position: 636-1032
Cow position: chr4:44425362-44425750 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 24

Conread position: 640-1032
Cow position: chr4:33002413-33002795 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 48

Conread position: 644-1032
Cow position: chr4:45382912-45383287 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 65

Conread position: 645-893
Cow position: chr4:23681348-23681106 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 142, 43

Conread position: 648-866
Cow position: chr4:40249786-40249565 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 51

Conread position: 654-1032
Cow position: chr4:16942387-16942004 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 654-1032
Cow position: chr4:18797748-18797379 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 51

Conread position: 656-1032
Cow position: chr4:23612890-23613264 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 53

Conread position: 658-1029
Cow position: chr4:39338347-39337978 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 30

Conread position: 659-859
Cow position: chr4:58789788-58789982 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 31

Conread position: 659-878
Cow position: chr4:29232248-29232466 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 11

Conread position: 659-1028
Cow position: chr4:43563814-43563464 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 26

Conread position: 659-1028
Cow position: chr4:43566926-43566576 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 26

Conread position: 659-1032
Cow position: chr4:18283793-18283433 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 64, 29

Conread position: 660-890
Cow position: chr4:49764928-49765163 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 49

Conread position: 660-1032
Cow position: chr4:35070241-35070602 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 28

Conread position: 661-1028
Cow position: chr4:43283684-43284043 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 667-1029
Cow position: chr4:55648202-55647868 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 173, 37

Conread position: 680-844
Cow position: chr4:39337157-39337322 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 8

Conread position: 680-1032
Cow position: chr4:25188782-25189117 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 10

Conread position: 683-846
Cow position: chr4:58787390-58787228 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 687-853
Cow position: chr4:53264825-53264992 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 21

Conread position: 687-889
Cow position: chr4:565270-565066 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 17

Conread position: 689-1032
Cow position: chr4:54377701-54377374 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 15

Conread position: 690-839
Cow position: chr4:4031941-4032088 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 694-1032
Cow position: chr4:54379035-54379360 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 152, 12

Conread position: 701-888
Cow position: chr4:54355874-54355685 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 13

Conread position: 702-890
Cow position: chr4:52516627-52516821 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 704-890
Cow position: chr4:59265710-59265532 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 12

Conread position: 705-1032
Cow position: chr4:37548715-37548400 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 13

Conread position: 708-989
Cow position: chr4:29119375-29119640 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 132, 165

Conread position: 713-973
Cow position: chr4:1226614-1226370 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 716-1029
Cow position: chr4:14422543-14422226 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 162

Conread position: 721-890
Cow position: chr4:28227524-28227356 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 150, 7

Conread position: 723-982
Cow position: chr4:14947332-14947576 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 123, 74

Conread position: 724-890
Cow position: chr4:17094088-17093922 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 148

Conread position: 725-894
Cow position: chr4:25153097-25153265 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 725-1032
Cow position: chr4:56263779-56263490 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 273, 110

Conread position: 727-880
Cow position: chr4:3899226-3899371 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 40

Conread position: 730-864
Cow position: chr4:60499792-60499927 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 730-1032
Cow position: chr4:32803627-32803913 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 33

Conread position: 734-990
Cow position: chr4:39086524-39086272 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 125, 14

Conread position: 737-1032
Cow position: chr4:32713355-32713629 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 102

Conread position: 740-1032
Cow position: chr4:43703853-43704145 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 74, 104

Conread position: 758-1029
Cow position: chr4:37343344-37343605 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 88, 115

Conread position: 760-865
Cow position: chr4:39001692-39001587 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 805-1032
Cow position: chr4:20475695-20475464 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 21, 101

Conread position: 861-1032
Cow position: chr4:59577493-59577326 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 148, 28

Show alignments to all cow chromosomes.