Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056N24.5
        

               Conread position:
               572-1032
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               604-838
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               604-1032
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               616-809
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               616-893
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               80, 38
               

               Conread position:
               616-1032
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 38
               

               Conread position:
               618-1032
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               619-897
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               620-871
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               621-864
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               219, 33
               

               Conread position:
               621-991
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               621-1032
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               627-1018
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               630-989
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               221, 58
               

               Conread position:
               631-810
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               631-1029
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               277
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               636-1032
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               639-989
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               201, 21
               

               Conread position:
               639-1032
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               643-829
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               643-1032
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               644-830
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               648-989
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               648-992
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               648-1032
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               651-989
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               655-837
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               656-865
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               659-867
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               659-868
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               659-870
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               659-1028
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               659-1029
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               659-1032
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               660-1032
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               662-838
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               665-890
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               675-1027
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               680-838
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               680-1032
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               687-968
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               248, 17
               

               Conread position:
               687-1032
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               689-869
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               151, 19
               

               Conread position:
               689-870
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               151, 29
               

               Conread position:
               691-989
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 218
               

               Conread position:
               696-844
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               698-1026
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               143, 87
               

               Conread position:
               702-910
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               703-1017
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               706-989
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               10, 127
               

               Conread position:
               707-1027
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               139, 111
               

               Conread position:
               718-870
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               718-1025
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               121, 193
               

               Conread position:
               719-1025
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               723-870
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               725-869
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               728-1018
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               732-978
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               733-1032
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 140
               

               Conread position:
               738-1018
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               738-1029
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               740-991
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               179, 138
               
Show alignments to all cow chromosomes.