Cow genome map

Conread name: Ss1.1-Pig4-TMW8056N24.5

Conread position: 577-989
Cow position: chr8:40114227-40114611 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 51

Conread position: 601-1032
Cow position: chr8:48455053-48454620 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 47

Conread position: 616-818
Cow position: chr8:21767471-21767669 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 192, 40

Conread position: 616-945
Cow position: chr8:23352415-23352746 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 72, 38

Conread position: 616-1032
Cow position: chr8:22040099-22039704 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 158

Conread position: 619-989
Cow position: chr8:7004431-7004082 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 245
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 29

Conread position: 620-859
Cow position: chr8:46794369-46794611 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 33

Conread position: 621-838
Cow position: chr8:4060474-4060256 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 27

Conread position: 621-1018
Cow position: chr8:20661143-20660759 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 628-854
Cow position: chr8:9073123-9072904 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 15

Conread position: 631-866
Cow position: chr8:33160703-33160939 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 17

Conread position: 632-890
Cow position: chr8:49673189-49672924 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 22

Conread position: 639-867
Cow position: chr8:24688441-24688209 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 69

Conread position: 643-878
Cow position: chr8:17430678-17430911 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 44

Conread position: 644-965
Cow position: chr8:60577649-60577962 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 25

Conread position: 646-1032
Cow position: chr8:25386473-25386842 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 22

Conread position: 651-1023
Cow position: chr8:1442824-1443183 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 55

Conread position: 654-962
Cow position: chr8:6871584-6871272 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 34

Conread position: 659-869
Cow position: chr8:5246709-5246919 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 49, 32

Conread position: 659-890
Cow position: chr8:17705175-17705406 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 181, 22

Conread position: 659-989
Cow position: chr8:1649420-1649106 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 276, 31

Conread position: 659-1032
Cow position: chr8:1653680-1654040 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 52

Conread position: 659-1032
Cow position: chr8:49987272-49986905 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 29

Conread position: 663-891
Cow position: chr8:60001054-60000817 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 25

Conread position: 663-902
Cow position: chr8:34835715-34835955 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 9

Conread position: 668-1032
Cow position: chr8:48674023-48674375 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 20, 64

Conread position: 680-868
Cow position: chr8:25797537-25797724 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 10

Conread position: 689-870
Cow position: chr8:49882189-49882006 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 15

Conread position: 689-973
Cow position: chr8:57724562-57724294 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 15

Conread position: 696-890
Cow position: chr8:12210585-12210386 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 696-953
Cow position: chr8:5669570-5669819 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 151, 10

Conread position: 701-810
Cow position: chr8:11420761-11420873 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 701-1032
Cow position: chr8:39059676-39059985 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 13

Conread position: 704-838
Cow position: chr8:9292826-9292960 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 35

Conread position: 707-1032
Cow position: chr8:35558707-35559020 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 148

Conread position: 717-1032
Cow position: chr8:37441745-37442064 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 123, 222

Conread position: 724-1027
Cow position: chr8:22754495-22754192 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 211, 125

Conread position: 725-868
Cow position: chr8:51963783-51963927 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 727-1032
Cow position: chr8:16231438-16231742 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 195

Conread position: 729-1032
Cow position: chr8:12084381-12084673 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 111, 145

Conread position: 733-991
Cow position: chr8:5671328-5671081 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 152

Conread position: 734-1032
Cow position: chr8:19024921-19024629 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 79

Conread position: 737-1032
Cow position: chr8:42640942-42640652 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 104, 159

Conread position: 744-1032
Cow position: chr8:24959375-24959652 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 138

Conread position: 749-993
Cow position: chr8:14961203-14961435 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 221, 123

Conread position: 759-975
Cow position: chr8:59224530-59224331 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 111

Conread position: 759-978
Cow position: chr8:51902648-51902870 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 125

Conread position: 798-1028
Cow position: chr8:31732019-31732244 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 87

Show alignments to all cow chromosomes.