Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057G08.5 |
| Conread position: | 184-412 |
| Cow position: | chr21:5464919-5464693 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 185-411 |
| Cow position: | chr21:17875018-17875244 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 185-413 |
| Cow position: | chr21:13365512-13365283 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 185-414 |
| Cow position: | chr21:12801577-12801803 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 185-437 |
| Cow position: | chr21:17559748-17560007 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 186-414 |
| Cow position: | chr21:28626406-28626184 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 187-375 |
| Cow position: | chr21:71754-71569 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 187-414 |
| Cow position: | chr21:42841429-42841654 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 5 |
| Conread position: | 193-316 |
| Cow position: | chr21:39393912-39393788 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 193-323 |
| Cow position: | chr21:802154-802284 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 193-326 |
| Cow position: | chr21:46451791-46451922 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 193-329 |
| Cow position: | chr21:17252816-17252949 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 193-348 |
| Cow position: | chr21:19360013-19360167 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 193-360 |
| Cow position: | chr21:19240710-19240879 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-365 |
| Cow position: | chr21:24598821-24598646 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-367 |
| Cow position: | chr21:30980415-30980587 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-376 |
| Cow position: | chr21:47160381-47160199 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 193-382 |
| Cow position: | chr21:28030451-28030264 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-395 |
| Cow position: | chr21:20160839-20160641 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 193-396 |
| Cow position: | chr21:29213997-29214193 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 193-397 |
| Cow position: | chr21:27569010-27569202 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 193-401 |
| Cow position: | chr21:742440-742245 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 193-402 |
| Cow position: | chr21:42413934-42414144 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 193-408 |
| Cow position: | chr21:37299625-37299414 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 131, 170 |
| Conread position: | 193-408 |
| Cow position: | chr21:41522252-41522457 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-409 |
| Cow position: | chr21:38121264-38121050 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 193-411 |
| Cow position: | chr21:30835526-30835310 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-412 |
| Cow position: | chr21:9416414-9416193 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 193-412 |
| Cow position: | chr21:30250041-30250244 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 193-412 |
| Cow position: | chr21:31691645-31691428 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 193-412 |
| Cow position: | chr21:32339577-32339791 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 193-413 |
| Cow position: | chr21:35354696-35354478 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 193-413 |
| Cow position: | chr21:47464956-47465177 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:643487-643272 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:4280512-4280728 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 193-414 |
| Cow position: | chr21:5392372-5392596 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-414 |
| Cow position: | chr21:7581742-7581962 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 193-414 |
| Cow position: | chr21:11739957-11740172 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 193-414 |
| Cow position: | chr21:12723314-12723104 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:16570062-16569845 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 193-414 |
| Cow position: | chr21:24858478-24858259 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 134, 122 |
| Conread position: | 193-414 |
| Cow position: | chr21:26245077-26244864 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 193-414 |
| Cow position: | chr21:27229632-27229850 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 193-414 |
| Cow position: | chr21:29069163-29069385 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 65, 194 |
| Conread position: | 193-414 |
| Cow position: | chr21:29485141-29484923 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:29978597-29978812 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:32559202-32559415 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 193-414 |
| Cow position: | chr21:33264007-33263793 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 127 |
| Conread position: | 193-414 |
| Cow position: | chr21:33350904-33350690 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 193-414 |
| Cow position: | chr21:34654236-34654021 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:41590402-41590616 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 193-414 |
| Cow position: | chr21:42135453-42135676 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-414 |
| Cow position: | chr21:44214289-44214068 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-414 |
| Cow position: | chr21:44825723-44825941 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 57, 124 |
| Conread position: | 193-414 |
| Cow position: | chr21:45262647-45262868 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr21:46264333-46264116 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 193-414 |
| Cow position: | chr21:47719139-47719355 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 193-415 |
| Cow position: | chr21:8206933-8206715 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 193-418 |
| Cow position: | chr21:868761-868985 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 194-336 |
| Cow position: | chr21:20163870-20163730 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 194-382 |
| Cow position: | chr21:20183233-20183045 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 194-412 |
| Cow position: | chr21:641749-641532 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 196, 144 |
| Conread position: | 194-414 |
| Cow position: | chr21:22861162-22860943 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 133, 12 |
| Conread position: | 195-414 |
| Cow position: | chr21:20418521-20418741 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 195-414 |
| Cow position: | chr21:36795764-36795544 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 198-413 |
| Cow position: | chr21:35899999-35899789 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 200-411 |
| Cow position: | chr21:18844856-18845068 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 118, 131 |
| Conread position: | 201-414 |
| Cow position: | chr21:20260164-20260377 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 201-414 |
| Cow position: | chr21:28191187-28190976 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 201-415 |
| Cow position: | chr21:82222-82022 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 201-421 |
| Cow position: | chr21:829054-829265 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 203-367 |
| Cow position: | chr21:12104519-12104354 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 205-412 |
| Cow position: | chr21:976997-977198 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 205-414 |
| Cow position: | chr21:16187656-16187864 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 125, 109 |
| Conread position: | 211-402 |
| Cow position: | chr21:8235417-8235598 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 211-402 |
| Cow position: | chr21:31662612-31662420 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 100, 148 |
| Conread position: | 211-402 |
| Cow position: | chr21:46551958-46552149 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-412 |
| Cow position: | chr21:10561438-10561638 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 211-414 |
| Cow position: | chr21:20193039-20192841 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 211-414 |
| Cow position: | chr21:30848796-30849004 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 211-414 |
| Cow position: | chr21:34390830-34391031 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 211-414 |
| Cow position: | chr21:38449304-38449503 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 44 |
| Conread position: | 211-414 |
| Cow position: | chr21:45920913-45921114 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 107 |
| Conread position: | 213-406 |
| Cow position: | chr21:34151729-34151536 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 213-412 |
| Cow position: | chr21:4399946-4399749 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 213-412 |
| Cow position: | chr21:25628766-25628965 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 213-414 |
| Cow position: | chr21:10264177-10263977 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 218-412 |
| Cow position: | chr21:22014329-22014133 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 6, 132 |
| Conread position: | 218-414 |
| Cow position: | chr21:297893-297697 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 6, 101 |
| Conread position: | 221-415 |
| Cow position: | chr21:8426581-8426384 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 158, 90 |
| Conread position: | 222-360 |
| Cow position: | chr21:46599495-46599357 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-378 |
| Cow position: | chr21:7673254-7673100 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 222-398 |
| Cow position: | chr21:45835267-45835442 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 222-411 |
| Cow position: | chr21:33982676-33982859 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 222-412 |
| Cow position: | chr21:22465325-22465143 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 168, 74 |
| Conread position: | 222-412 |
| Cow position: | chr21:47363600-47363793 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 222-414 |
| Cow position: | chr21:724751-724942 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 222-414 |
| Cow position: | chr21:9990644-9990460 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 222-414 |
| Cow position: | chr21:19363325-19363519 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 222-414 |
| Cow position: | chr21:29002019-29002214 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 222-434 |
| Cow position: | chr21:24642654-24642443 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 206, 32 |
| Conread position: | 226-421 |
| Cow position: | chr21:10089862-10090054 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 227-378 |
| Cow position: | chr21:42540093-42540242 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 88 |
| Conread position: | 227-394 |
| Cow position: | chr21:42209500-42209667 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 108, 112 |
| Conread position: | 227-399 |
| Cow position: | chr21:13048064-13048236 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 94, 104 |
| Conread position: | 227-399 |
| Cow position: | chr21:46141177-46141003 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 227-400 |
| Cow position: | chr21:18155437-18155609 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 227-401 |
| Cow position: | chr21:4904838-4905009 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:15584290-15584464 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:17009110-17008940 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:19059964-19060131 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:28919394-28919568 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:30606957-30607133 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:37789870-37790044 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 227-402 |
| Cow position: | chr21:41198270-41198448 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 227-412 |
| Cow position: | chr21:17890431-17890249 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-412 |
| Cow position: | chr21:17929708-17929892 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 90 |
| Conread position: | 227-412 |
| Cow position: | chr21:22856347-22856167 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 227-412 |
| Cow position: | chr21:42384637-42384456 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-413 |
| Cow position: | chr21:36910060-36909880 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 104 |
| Conread position: | 227-414 |
| Cow position: | chr21:47169-46981 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:395996-395814 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:957801-957616 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 177, 42 |
| Conread position: | 227-414 |
| Cow position: | chr21:8349457-8349272 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 227-414 |
| Cow position: | chr21:10004757-10004942 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:10601246-10601430 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 142 |
| Conread position: | 227-414 |
| Cow position: | chr21:11644837-11645026 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:12461838-12462026 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 112, 103 |
| Conread position: | 227-414 |
| Cow position: | chr21:13488656-13488466 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:18289792-18289608 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:23587011-23586824 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-414 |
| Cow position: | chr21:36297622-36297434 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 227-415 |
| Cow position: | chr21:33997098-33997284 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 227-437 |
| Cow position: | chr21:11198019-11198227 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 228-400 |
| Cow position: | chr21:10410350-10410178 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 228-401 |
| Cow position: | chr21:6017753-6017576 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 228-402 |
| Cow position: | chr21:20153084-20152910 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-402 |
| Cow position: | chr21:40266249-40266080 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 228-412 |
| Cow position: | chr21:15976761-15976580 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 228-414 |
| Cow position: | chr21:30222473-30222288 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 228-414 |
| Cow position: | chr21:44515392-44515207 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 170, 90 |
| Conread position: | 228-414 |
| Cow position: | chr21:46144087-46143903 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 229-402 |
| Cow position: | chr21:13840453-13840281 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 229-414 |
| Cow position: | chr21:28733786-28733968 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 229-436 |
| Cow position: | chr21:7394507-7394305 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 230-396 |
| Cow position: | chr21:17856670-17856504 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-398 |
| Cow position: | chr21:471801-471637 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 84 |
| Conread position: | 232-414 |
| Cow position: | chr21:1591678-1591496 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 88 |
| Conread position: | 235-400 |
| Cow position: | chr21:41878592-41878429 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 240-413 |
| Cow position: | chr21:20262219-20262388 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 240-414 |
| Cow position: | chr21:23149905-23150077 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 240-414 |
| Cow position: | chr21:23192393-23192570 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 240-414 |
| Cow position: | chr21:37480070-37479903 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 242-414 |
| Cow position: | chr21:11360150-11359983 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 243-412 |
| Cow position: | chr21:37014293-37014456 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 244-414 |
| Cow position: | chr21:2679669-2679500 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 245-414 |
| Cow position: | chr21:6102151-6102315 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 248-414 |
| Cow position: | chr21:2904370-2904529 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 248-425 |
| Cow position: | chr21:41598227-41598051 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 256-414 |
| Cow position: | chr21:12339741-12339583 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 130 |
| Conread position: | 261-414 |
| Cow position: | chr21:18041752-18041904 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 269-412 |
| Cow position: | chr21:16612712-16612571 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 49 |
Show alignments to all cow chromosomes.