Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057G08.5 |
| Conread position: | 185-316 |
| Cow position: | chr26:17652083-17651953 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 185-391 |
| Cow position: | chr26:8699924-8700127 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 187-412 |
| Cow position: | chr26:15200395-15200614 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 193-322 |
| Cow position: | chr26:33242005-33241877 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 193-323 |
| Cow position: | chr26:34611065-34611195 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-360 |
| Cow position: | chr26:12940516-12940356 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 193-367 |
| Cow position: | chr26:32652618-32652790 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-378 |
| Cow position: | chr26:21636921-21637107 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 129, 140 |
| Conread position: | 193-379 |
| Cow position: | chr26:14481438-14481621 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 133, 112 |
| Conread position: | 193-395 |
| Cow position: | chr26:23924966-23924764 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 133, 189 |
| Conread position: | 193-397 |
| Cow position: | chr26:8307412-8307608 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 193-398 |
| Cow position: | chr26:26950339-26950541 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 193-402 |
| Cow position: | chr26:677864-678070 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 193-403 |
| Cow position: | chr26:6514959-6514750 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 193-408 |
| Cow position: | chr26:28251272-28251053 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 193-411 |
| Cow position: | chr26:14175398-14175179 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 166, 125 |
| Conread position: | 193-412 |
| Cow position: | chr26:21243211-21243001 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 193-413 |
| Cow position: | chr26:13802227-13802012 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-413 |
| Cow position: | chr26:20291576-20291784 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:647610-647823 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:6475313-6475533 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 162, 42 |
| Conread position: | 193-414 |
| Cow position: | chr26:9492038-9491823 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 193-414 |
| Cow position: | chr26:12145002-12145222 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:12964581-12964799 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:13021029-13021248 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:17148820-17148601 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 193-414 |
| Cow position: | chr26:19110300-19110081 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 193-414 |
| Cow position: | chr26:19446248-19446024 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 193-414 |
| Cow position: | chr26:20769967-20769752 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 144, 136 |
| Conread position: | 193-414 |
| Cow position: | chr26:22892329-22892545 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 193-414 |
| Cow position: | chr26:24240795-24240573 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 193-414 |
| Cow position: | chr26:26888019-26888233 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 193-414 |
| Cow position: | chr26:27491385-27491604 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 193-414 |
| Cow position: | chr26:31137350-31137552 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 193-414 |
| Cow position: | chr26:31605522-31605303 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:32566127-32565913 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 193-414 |
| Cow position: | chr26:34724759-34724978 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 193-414 |
| Cow position: | chr26:34847860-34847639 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 193-427 |
| Cow position: | chr26:33566928-33567161 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 111, 98 |
| Conread position: | 194-414 |
| Cow position: | chr26:9535631-9535415 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 194-414 |
| Cow position: | chr26:23315889-23315667 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 195-402 |
| Cow position: | chr26:8643055-8642854 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 134, 59 |
| Conread position: | 195-408 |
| Cow position: | chr26:7687131-7687337 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 201-414 |
| Cow position: | chr26:16783934-16783721 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 201-414 |
| Cow position: | chr26:23582837-23583049 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 189, 117 |
| Conread position: | 208-330 |
| Cow position: | chr26:1328755-1328877 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-400 |
| Cow position: | chr26:8353067-8352872 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 212-413 |
| Cow position: | chr26:33736456-33736653 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 212-414 |
| Cow position: | chr26:22249380-22249581 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 127, 106 |
| Conread position: | 213-412 |
| Cow position: | chr26:586783-586976 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 213-412 |
| Cow position: | chr26:25299696-25299500 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 105 |
| Conread position: | 213-413 |
| Cow position: | chr26:31633825-31633627 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 214-414 |
| Cow position: | chr26:18651541-18651737 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 215-412 |
| Cow position: | chr26:33253221-33253420 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 218-414 |
| Cow position: | chr26:25394131-25393928 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 6, 107 |
| Conread position: | 219-414 |
| Cow position: | chr26:6714211-6714396 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 73 |
| Conread position: | 222-411 |
| Cow position: | chr26:22354500-22354314 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 222-412 |
| Cow position: | chr26:22152314-22152126 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 159, 93 |
| Conread position: | 222-413 |
| Cow position: | chr26:32955543-32955734 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 222-414 |
| Cow position: | chr26:32897782-32897974 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-378 |
| Cow position: | chr26:26537439-26537593 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 227-395 |
| Cow position: | chr26:12893345-12893509 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-400 |
| Cow position: | chr26:19774217-19774390 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 227-402 |
| Cow position: | chr26:29333175-29333002 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 227-402 |
| Cow position: | chr26:30861667-30861837 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 227-412 |
| Cow position: | chr26:4807636-4807461 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 227-412 |
| Cow position: | chr26:8811209-8811029 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-412 |
| Cow position: | chr26:21992184-21992002 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-412 |
| Cow position: | chr26:23142022-23142203 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 151 |
| Conread position: | 227-413 |
| Cow position: | chr26:34314773-34314588 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 227-414 |
| Cow position: | chr26:16550070-16549882 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 227-414 |
| Cow position: | chr26:35704470-35704287 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 228-390 |
| Cow position: | chr26:15857815-15857653 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 228-402 |
| Cow position: | chr26:6865105-6864925 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 228-414 |
| Cow position: | chr26:2739374-2739561 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 109 |
| Conread position: | 228-414 |
| Cow position: | chr26:25526330-25526144 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 90 |
| Conread position: | 229-398 |
| Cow position: | chr26:16179642-16179477 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 229-414 |
| Cow position: | chr26:23671496-23671310 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 231-440 |
| Cow position: | chr26:31903245-31903034 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 101 |
| Conread position: | 235-414 |
| Cow position: | chr26:35302147-35302332 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 236-414 |
| Cow position: | chr26:10747561-10747729 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 23 |
| Conread position: | 241-414 |
| Cow position: | chr26:9867058-9867220 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 255-414 |
| Cow position: | chr26:5307197-5307033 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.