Cow genome map

Conread name: Ss1.1-Pig4-TMW8057G08.5

Conread position: 179-353
Cow position: chr5:26549002-26549175 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 184-378
Cow position: chr5:66366643-66366449 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 66

Conread position: 185-360
Cow position: chr5:66531050-66530877 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 185-391
Cow position: chr5:38689402-38689614 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 185-414
Cow position: chr5:30233040-30232805 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 139, 29

Conread position: 185-414
Cow position: chr5:49440738-49440966 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 133

Conread position: 185-414
Cow position: chr5:65941119-65941344 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 7

Conread position: 186-384
Cow position: chr5:61455975-61455781 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 7

Conread position: 186-414
Cow position: chr5:12322675-12322895 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 138, 65

Conread position: 186-434
Cow position: chr5:59384558-59384808 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 28

Conread position: 187-414
Cow position: chr5:45804190-45803969 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 27

Conread position: 187-440
Cow position: chr5:54060406-54060155 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 8

Conread position: 193-314
Cow position: chr5:50824717-50824596 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 193-316
Cow position: chr5:21223448-21223326 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 193-355
Cow position: chr5:57686612-57686776 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 193-357
Cow position: chr5:20288138-20288301 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 193-357
Cow position: chr5:61102841-61102677 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 91

Conread position: 193-360
Cow position: chr5:17602080-17602241 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 26

Conread position: 193-360
Cow position: chr5:35982612-35982781 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 21

Conread position: 193-360
Cow position: chr5:49341924-49342089 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 26

Conread position: 193-363
Cow position: chr5:69099845-69099675 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 193-365
Cow position: chr5:56517229-56517057 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 62

Conread position: 193-369
Cow position: chr5:67118545-67118369 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 21

Conread position: 193-382
Cow position: chr5:46509740-46509929 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 133, 151

Conread position: 193-382
Cow position: chr5:63150044-63150229 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 193-386
Cow position: chr5:40109617-40109425 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 193-389
Cow position: chr5:59626847-59627043 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 138, 13

Conread position: 193-400
Cow position: chr5:16214812-16214604 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 193-400
Cow position: chr5:57639850-57640049 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 12

Conread position: 193-401
Cow position: chr5:66551771-66551980 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 193-402
Cow position: chr5:17554908-17555113 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 18

Conread position: 193-402
Cow position: chr5:29903398-29903600 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 0

Conread position: 193-402
Cow position: chr5:47323587-47323383 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 27

Conread position: 193-402
Cow position: chr5:55019417-55019213 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 26

Conread position: 193-402
Cow position: chr5:63987321-63987527 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 61

Conread position: 193-408
Cow position: chr5:28302618-28302835 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 26

Conread position: 193-411
Cow position: chr5:53835841-53835622 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 27

Conread position: 193-412
Cow position: chr5:26467753-26467531 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 193-412
Cow position: chr5:68718992-68718782 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 58

Conread position: 193-413
Cow position: chr5:11229548-11229762 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 77

Conread position: 193-413
Cow position: chr5:30303016-30302800 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 23

Conread position: 193-413
Cow position: chr5:35969657-35969449 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 193-413
Cow position: chr5:64758642-64758864 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 193-414
Cow position: chr5:5257163-5257387 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:6045421-6045197 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 193-414
Cow position: chr5:7698125-7697911 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 125, 0

Conread position: 193-414
Cow position: chr5:12434668-12434441 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:15426663-15426435 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 21

Conread position: 193-414
Cow position: chr5:15721949-15722160 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 193-414
Cow position: chr5:16893646-16893866 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 123

Conread position: 193-414
Cow position: chr5:17768024-17768238 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 125

Conread position: 193-414
Cow position: chr5:21828992-21828772 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 193-414
Cow position: chr5:23168701-23168919 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 131, 192

Conread position: 193-414
Cow position: chr5:24996098-24996317 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 193-414
Cow position: chr5:30845235-30845019 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 61

Conread position: 193-414
Cow position: chr5:30949790-30950010 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:32338840-32339058 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 98

Conread position: 193-414
Cow position: chr5:34562142-34561918 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 24

Conread position: 193-414
Cow position: chr5:35826727-35826509 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 0

Conread position: 193-414
Cow position: chr5:36038876-36039098 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:38833246-38833029 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:42050677-42050457 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 27

Conread position: 193-414
Cow position: chr5:42670739-42670950 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 47

Conread position: 193-414
Cow position: chr5:43929611-43929831 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 21

Conread position: 193-414
Cow position: chr5:44446740-44446962 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 0

Conread position: 193-414
Cow position: chr5:45397694-45397484 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 40

Conread position: 193-414
Cow position: chr5:46512644-46512857 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 193-414
Cow position: chr5:50533263-50533481 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 21

Conread position: 193-414
Cow position: chr5:50600173-50599962 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:50821908-50821688 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 134, 112

Conread position: 193-414
Cow position: chr5:54375377-54375601 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:56014856-56014640 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 173, 0

Conread position: 193-414
Cow position: chr5:56524299-56524081 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 23

Conread position: 193-414
Cow position: chr5:56877607-56877394 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 68

Conread position: 193-414
Cow position: chr5:57074206-57074428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:57934983-57935203 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 193-414
Cow position: chr5:60016290-60016073 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 193-414
Cow position: chr5:62172537-62172322 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:62378905-62378697 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 193-414
Cow position: chr5:64026894-64027102 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 193-414
Cow position: chr5:64139685-64139472 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:64176001-64176211 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 142, 0

Conread position: 193-414
Cow position: chr5:65967606-65967822 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 26

Conread position: 193-414
Cow position: chr5:66257761-66257545 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 193-414
Cow position: chr5:69337945-69337735 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 193-414
Cow position: chr5:69461460-69461240 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 21

Conread position: 193-414
Cow position: chr5:70951764-70951970 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 193-415
Cow position: chr5:17086896-17087120 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 26

Conread position: 193-415
Cow position: chr5:44028182-44028396 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 194-414
Cow position: chr5:21617582-21617364 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 194-414
Cow position: chr5:72951968-72951747 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 144, 191

Conread position: 195-399
Cow position: chr5:69636347-69636156 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 195-414
Cow position: chr5:49474422-49474639 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 24

Conread position: 195-414
Cow position: chr5:56070982-56070762 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 200-403
Cow position: chr5:43403023-43402817 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 14

Conread position: 200-413
Cow position: chr5:9894005-9894222 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 118

Conread position: 200-414
Cow position: chr5:30276808-30276603 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 19

Conread position: 200-414
Cow position: chr5:55966762-55966973 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 200-414
Cow position: chr5:58793489-58793708 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 134, 115

Conread position: 201-334
Cow position: chr5:9233872-9234007 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 201-382
Cow position: chr5:41545776-41545956 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 117

Conread position: 201-400
Cow position: chr5:31640542-31640340 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 117

Conread position: 201-414
Cow position: chr5:7044588-7044801 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 117

Conread position: 201-414
Cow position: chr5:14314645-14314431 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 127, 0

Conread position: 201-414
Cow position: chr5:30629039-30629252 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 120

Conread position: 201-414
Cow position: chr5:64591978-64592188 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 202-414
Cow position: chr5:73418174-73418376 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 203-414
Cow position: chr5:60183920-60183707 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 135

Conread position: 209-402
Cow position: chr5:65765019-65765207 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 100

Conread position: 210-402
Cow position: chr5:65601566-65601381 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 79

Conread position: 210-412
Cow position: chr5:56636003-56635809 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 211-402
Cow position: chr5:23529175-23529362 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 9

Conread position: 211-412
Cow position: chr5:43992431-43992230 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 211-414
Cow position: chr5:41294187-41293986 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 8

Conread position: 211-415
Cow position: chr5:62639011-62638812 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 213-396
Cow position: chr5:37189991-37190171 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 107

Conread position: 213-402
Cow position: chr5:65883666-65883855 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 103

Conread position: 213-411
Cow position: chr5:33834146-33833953 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 213-411
Cow position: chr5:53855812-53855607 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 112

Conread position: 213-412
Cow position: chr5:12902023-12901825 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 79

Conread position: 213-414
Cow position: chr5:63426899-63427102 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 213-414
Cow position: chr5:64523757-64523961 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 106

Conread position: 213-436
Cow position: chr5:54048246-54048464 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 111

Conread position: 213-436
Cow position: chr5:63647373-63647588 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 11

Conread position: 215-414
Cow position: chr5:52165074-52165273 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 27

Conread position: 218-376
Cow position: chr5:56338920-56339074 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 101

Conread position: 218-414
Cow position: chr5:25230911-25231098 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 36

Conread position: 218-414
Cow position: chr5:52644979-52645173 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 101

Conread position: 218-416
Cow position: chr5:54767808-54768006 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 82

Conread position: 219-399
Cow position: chr5:19752401-19752226 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 36

Conread position: 222-383
Cow position: chr5:26150325-26150484 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 222-390
Cow position: chr5:67212457-67212286 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 222-411
Cow position: chr5:29828143-29827958 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 59, 97

Conread position: 222-412
Cow position: chr5:13717473-13717659 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 222-412
Cow position: chr5:65752956-65752765 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 109

Conread position: 222-413
Cow position: chr5:45845595-45845785 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 145

Conread position: 222-414
Cow position: chr5:16206059-16206249 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 60

Conread position: 222-414
Cow position: chr5:30253837-30253647 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 0

Conread position: 222-414
Cow position: chr5:32696727-32696915 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 222-414
Cow position: chr5:58446903-58446709 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 93

Conread position: 222-414
Cow position: chr5:62142772-62142576 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 133, 163

Conread position: 222-414
Cow position: chr5:64321850-64321659 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 133, 96

Conread position: 222-414
Cow position: chr5:74016036-74015846 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 169, 50

Conread position: 222-416
Cow position: chr5:72564860-72564664 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 114

Conread position: 223-411
Cow position: chr5:55956003-55955816 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 48

Conread position: 224-414
Cow position: chr5:41713390-41713208 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 47

Conread position: 225-414
Cow position: chr5:34301005-34300822 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 27

Conread position: 226-402
Cow position: chr5:33414319-33414491 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 227-366
Cow position: chr5:63192650-63192788 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 227-377
Cow position: chr5:6503790-6503940 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 99, 113

Conread position: 227-398
Cow position: chr5:37893425-37893255 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 110, 91

Conread position: 227-402
Cow position: chr5:19523991-19523818 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 227-402
Cow position: chr5:23678611-23678784 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 27

Conread position: 227-402
Cow position: chr5:43371104-43371277 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 67

Conread position: 227-402
Cow position: chr5:47704035-47704209 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 164, 92

Conread position: 227-402
Cow position: chr5:50575875-50575703 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 227-402
Cow position: chr5:64137347-64137172 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 87

Conread position: 227-402
Cow position: chr5:64555620-64555451 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 227-411
Cow position: chr5:34050209-34050025 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 227-412
Cow position: chr5:1087108-1087288 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 227-412
Cow position: chr5:14473313-14473505 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 227-412
Cow position: chr5:15479217-15479034 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 91

Conread position: 227-412
Cow position: chr5:35126146-35125961 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 112

Conread position: 227-412
Cow position: chr5:45273410-45273591 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 227-412
Cow position: chr5:57101691-57101866 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 99, 27

Conread position: 227-413
Cow position: chr5:47601903-47601726 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 227-414
Cow position: chr5:5110983-5111169 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 88, 0

Conread position: 227-414
Cow position: chr5:6286342-6286518 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 227-414
Cow position: chr5:7755478-7755656 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 227-414
Cow position: chr5:8820922-8821102 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 32

Conread position: 227-414
Cow position: chr5:14629719-14629907 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 106

Conread position: 227-414
Cow position: chr5:20422102-20422278 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 227-414
Cow position: chr5:24349198-24349013 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 185, 91

Conread position: 227-414
Cow position: chr5:37646452-37646642 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 227-414
Cow position: chr5:41165179-41164992 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 227-414
Cow position: chr5:63865886-63865701 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 26

Conread position: 227-414
Cow position: chr5:74643587-74643765 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 227-415
Cow position: chr5:22242674-22242869 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 30

Conread position: 227-420
Cow position: chr5:19335690-19335885 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 228-382
Cow position: chr5:1461179-1461025 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 86

Conread position: 228-402
Cow position: chr5:11427143-11427317 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 228-402
Cow position: chr5:67932382-67932546 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 228-412
Cow position: chr5:57561613-57561428 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 228-414
Cow position: chr5:33560644-33560828 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 183, 107

Conread position: 228-414
Cow position: chr5:44726244-44726420 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 228-414
Cow position: chr5:45574710-45574521 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 92

Conread position: 228-414
Cow position: chr5:58856192-58856009 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 169, 19

Conread position: 228-414
Cow position: chr5:60747190-60747372 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 36

Conread position: 228-414
Cow position: chr5:67540111-67540297 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 126, 90

Conread position: 231-414
Cow position: chr5:15598148-15598327 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 233-411
Cow position: chr5:31144702-31144879 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 235-413
Cow position: chr5:34638967-34638791 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 237-414
Cow position: chr5:32140627-32140802 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 239-411
Cow position: chr5:27155096-27154931 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 79

Conread position: 240-412
Cow position: chr5:25447642-25447471 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 81

Conread position: 240-414
Cow position: chr5:991542-991372 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 244-414
Cow position: chr5:6670119-6670288 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 246-414
Cow position: chr5:56820189-56820356 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 250-433
Cow position: chr5:61068459-61068274 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 98

Conread position: 265-420
Cow position: chr5:51800919-51801071 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 269-414
Cow position: chr5:60126422-60126277 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 67

Conread position: 272-414
Cow position: chr5:27015726-27015590 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 275-414
Cow position: chr5:3549738-3549880 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 105

Conread position: 283-414
Cow position: chr5:62826717-62826848 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.