Cow genome map

Conread name: Ss1.1-Pig4-TMW8057J02.3

Conread position: 474-756
Cow position: chr21:31993207-31992920 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 7

Conread position: 507-771
Cow position: chr21:17559594-17559846 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 56

Conread position: 509-752
Cow position: chr21:31090096-31090340 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 19

Conread position: 511-785
Cow position: chr21:13584729-13584996 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 514-776
Cow position: chr21:8986347-8986094 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 5

Conread position: 520-785
Cow position: chr21:37928967-37928712 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 41, 27

Conread position: 522-779
Cow position: chr21:27711926-27712174 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 204, 13

Conread position: 522-787
Cow position: chr21:24296451-24296707 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 8

Conread position: 525-781
Cow position: chr21:8240619-8240379 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 527-773
Cow position: chr21:10537936-10538180 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 21

Conread position: 530-713
Cow position: chr21:11251338-11251151 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 20

Conread position: 531-653
Cow position: chr21:21202378-21202499 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 535-779
Cow position: chr21:44724077-44724299 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 535-785
Cow position: chr21:40432763-40432508 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 148, 0

Conread position: 536-668
Cow position: chr21:39401937-39401807 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 11

Conread position: 539-673
Cow position: chr21:43264885-43265017 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 28

Conread position: 539-789
Cow position: chr21:42463372-42463629 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 84

Conread position: 540-775
Cow position: chr21:8545724-8545949 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 113

Conread position: 541-785
Cow position: chr21:1511579-1511356 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 542-786
Cow position: chr21:38482676-38482445 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 95

Conread position: 543-785
Cow position: chr21:7768717-7768501 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 544-753
Cow position: chr21:48334497-48334697 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 545-776
Cow position: chr21:12349058-12348837 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 98

Conread position: 545-781
Cow position: chr21:18790263-18790495 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 49

Conread position: 547-668
Cow position: chr21:2926855-2926975 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 18

Conread position: 547-773
Cow position: chr21:9278815-9278598 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 89

Conread position: 547-789
Cow position: chr21:29001863-29002096 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 210, 12

Conread position: 547-789
Cow position: chr21:41974077-41974315 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 98

Conread position: 547-790
Cow position: chr21:47363435-47363678 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 81

Conread position: 548-718
Cow position: chr21:10812451-10812275 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 548-776
Cow position: chr21:5214634-5214420 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 548-785
Cow position: chr21:10004597-10004822 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 86

Conread position: 548-789
Cow position: chr21:49699753-49699981 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 18

Conread position: 548-792
Cow position: chr21:48482241-48482472 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 93

Conread position: 549-674
Cow position: chr21:5489035-5488911 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 550-752
Cow position: chr21:32297223-32297423 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 85

Conread position: 550-755
Cow position: chr21:35569055-35569271 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 550-761
Cow position: chr21:8430816-8431013 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 17

Conread position: 550-781
Cow position: chr21:10515119-10514873 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 118

Conread position: 550-781
Cow position: chr21:37299745-37299529 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 59

Conread position: 550-785
Cow position: chr21:18568357-18568576 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 551-756
Cow position: chr21:40266407-40266213 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 100

Conread position: 551-776
Cow position: chr21:19148394-19148182 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 551-776
Cow position: chr21:34737441-34737238 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 136, 14

Conread position: 551-776
Cow position: chr21:36910235-36910003 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 60

Conread position: 551-785
Cow position: chr21:44672056-44671808 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 17

Conread position: 552-686
Cow position: chr21:29485557-29485419 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 552-784
Cow position: chr21:46132875-46132638 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 553-775
Cow position: chr21:25159473-25159245 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 13

Conread position: 553-781
Cow position: chr21:19359876-19360109 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 48

Conread position: 554-773
Cow position: chr21:24351130-24350927 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 554-776
Cow position: chr21:27810671-27810462 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 554-779
Cow position: chr21:17184198-17183986 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 554-790
Cow position: chr21:30255976-30256211 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 184

Conread position: 555-674
Cow position: chr21:48050649-48050771 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 555-721
Cow position: chr21:48242771-48242929 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 555-781
Cow position: chr21:42146424-42146213 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 42

Conread position: 555-785
Cow position: chr21:31279532-31279319 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 556-775
Cow position: chr21:8648556-8648336 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 139

Conread position: 556-781
Cow position: chr21:42841309-42841530 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 557-785
Cow position: chr21:30897704-30897479 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 79

Conread position: 558-766
Cow position: chr21:44251566-44251761 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 125, 17

Conread position: 559-770
Cow position: chr21:47713733-47713926 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 559-771
Cow position: chr21:938297-938096 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 84

Conread position: 559-787
Cow position: chr21:36682602-36682386 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 51

Conread position: 560-785
Cow position: chr21:20318787-20318576 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 39

Conread position: 562-728
Cow position: chr21:9256384-9256544 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 562-748
Cow position: chr21:652282-652477 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 562-765
Cow position: chr21:41956929-41957128 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 117

Conread position: 562-771
Cow position: chr21:34010124-34010319 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 562-773
Cow position: chr21:30145361-30145553 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 562-779
Cow position: chr21:11743221-11743435 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 562-779
Cow position: chr21:14452506-14452303 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 44

Conread position: 562-779
Cow position: chr21:44825602-44825820 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 62

Conread position: 562-781
Cow position: chr21:30980287-30980510 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 74, 182

Conread position: 562-781
Cow position: chr21:41450666-41450449 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 19

Conread position: 562-785
Cow position: chr21:34006-33782 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 13, 86

Conread position: 562-785
Cow position: chr21:41610451-41610230 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 147, 94

Conread position: 562-789
Cow position: chr21:47319-47099 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 562-790
Cow position: chr21:20213499-20213718 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 127, 81

Conread position: 563-771
Cow position: chr21:32272202-32271997 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 15, 75

Conread position: 563-785
Cow position: chr21:1764586-1764804 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 68

Conread position: 564-767
Cow position: chr21:27744299-27744106 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 87, 0

Conread position: 565-761
Cow position: chr21:3135599-3135782 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 40

Conread position: 566-783
Cow position: chr21:1562262-1562477 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 117, 92

Conread position: 566-785
Cow position: chr21:27568891-27569106 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 179, 0

Conread position: 566-785
Cow position: chr21:46264459-46264234 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 69, 216

Conread position: 566-790
Cow position: chr21:46470490-46470244 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 204

Conread position: 567-768
Cow position: chr21:42680329-42680522 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 568-668
Cow position: chr21:48285140-48285240 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 48

Conread position: 568-727
Cow position: chr21:36048146-36048302 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 32

Conread position: 568-733
Cow position: chr21:6042055-6041899 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 568-735
Cow position: chr21:39845868-39845706 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 74

Conread position: 568-736
Cow position: chr21:45537456-45537296 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 70

Conread position: 568-737
Cow position: chr21:3359117-3359291 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 68, 95

Conread position: 568-744
Cow position: chr21:8452183-8452008 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 36

Conread position: 568-771
Cow position: chr21:37360973-37361165 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 568-771
Cow position: chr21:39888460-39888663 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 96

Conread position: 568-776
Cow position: chr21:41041214-41041016 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 568-776
Cow position: chr21:41917973-41918169 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 194, 49

Conread position: 568-781
Cow position: chr21:7394005-7394219 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 181

Conread position: 568-781
Cow position: chr21:13365631-13365410 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 88, 200

Conread position: 568-785
Cow position: chr21:6051771-6051566 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 96

Conread position: 568-785
Cow position: chr21:32339479-32339677 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 568-785
Cow position: chr21:38720515-38720313 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 568-786
Cow position: chr21:20260031-20260257 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 133

Conread position: 568-789
Cow position: chr21:868653-868865 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 569-728
Cow position: chr21:32392797-32392947 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 569-743
Cow position: chr21:5345146-5344983 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 569-749
Cow position: chr21:4568699-4568530 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 569-767
Cow position: chr21:41738173-41737989 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 570-779
Cow position: chr21:8713693-8713891 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 570-783
Cow position: chr21:27677747-27677549 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 66

Conread position: 570-785
Cow position: chr21:3585100-3585305 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 570-785
Cow position: chr21:40475765-40475562 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 570-785
Cow position: chr21:42384800-42384571 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 571-721
Cow position: chr21:38722492-38722331 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 571-767
Cow position: chr21:16797115-16796932 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 29

Conread position: 571-767
Cow position: chr21:40457871-40457682 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 571-771
Cow position: chr21:16927817-16928029 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 133

Conread position: 571-773
Cow position: chr21:10762043-10761842 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 34

Conread position: 571-773
Cow position: chr21:26658698-26658907 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 571-781
Cow position: chr21:5486232-5486447 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 571-783
Cow position: chr21:28882446-28882245 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 198, 65

Conread position: 571-787
Cow position: chr21:9417881-9418094 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 96

Conread position: 571-787
Cow position: chr21:20153220-20153017 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 109, 65

Conread position: 571-789
Cow position: chr21:42131075-42131296 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 125

Conread position: 572-771
Cow position: chr21:6292011-6291823 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 572-785
Cow position: chr21:13164141-13163922 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 28

Conread position: 573-768
Cow position: chr21:45446799-45446614 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 186, 63

Conread position: 573-790
Cow position: chr21:24797916-24797715 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 574-789
Cow position: chr21:23673005-23672808 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 575-767
Cow position: chr21:40305229-40305024 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 26

Conread position: 575-779
Cow position: chr21:42017341-42017534 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 45

Conread position: 577-779
Cow position: chr21:30157528-30157738 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 119

Conread position: 577-785
Cow position: chr21:28924381-28924172 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 50, 89

Conread position: 577-785
Cow position: chr21:36795881-36795666 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 577-787
Cow position: chr21:30231439-30231633 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 577-789
Cow position: chr21:5465004-5464809 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 577-790
Cow position: chr21:22209986-22210188 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 580-771
Cow position: chr21:11779284-11779464 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 146, 57

Conread position: 580-772
Cow position: chr21:42562903-42562706 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 173

Conread position: 580-773
Cow position: chr21:12739342-12739155 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 70

Conread position: 580-790
Cow position: chr21:26245184-26244972 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 20

Conread position: 582-770
Cow position: chr21:27568146-27567973 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 583-737
Cow position: chr21:31258720-31258577 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 68

Conread position: 583-775
Cow position: chr21:42355892-42355703 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 583-776
Cow position: chr21:24266310-24266494 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 53

Conread position: 583-779
Cow position: chr21:8978720-8978516 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 122

Conread position: 583-781
Cow position: chr21:14228009-14228213 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 90

Conread position: 583-785
Cow position: chr21:28237448-28237643 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 583-787
Cow position: chr21:11057608-11057817 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 53, 164

Conread position: 600-781
Cow position: chr21:38692437-38692267 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 603-748
Cow position: chr21:34776873-34777020 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 65

Conread position: 608-781
Cow position: chr21:23321837-23322011 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 608-790
Cow position: chr21:44591968-44592151 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 65

Conread position: 609-727
Cow position: chr21:30223907-30224024 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 609-787
Cow position: chr21:15279910-15279733 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 59

Conread position: 633-787
Cow position: chr21:30119908-30119755 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 634-781
Cow position: chr21:27624912-27624765 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 634-781
Cow position: chr21:45920846-45920991 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 635-789
Cow position: chr21:42135403-42135557 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 9

Conread position: 639-789
Cow position: chr21:3818418-3818268 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 69

Conread position: 640-781
Cow position: chr21:5341888-5342027 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 640-785
Cow position: chr21:33350948-33350804 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 640-790
Cow position: chr21:10633432-10633579 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 60

Conread position: 641-785
Cow position: chr21:42413890-42414035 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 24

Conread position: 643-785
Cow position: chr21:47763914-47764054 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 644-787
Cow position: chr21:26567574-26567716 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 648-785
Cow position: chr21:29978560-29978697 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 659-785
Cow position: chr21:38900960-38900837 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 663-781
Cow position: chr21:46451769-46451887 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 664-781
Cow position: chr21:28030472-28030356 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 664-785
Cow position: chr21:23587065-23586945 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 29

Conread position: 674-785
Cow position: chr21:38267888-38267999 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.