Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057J02.3 |
| Conread position: | 512-667 |
| Cow position: | chr24:12828424-12828271 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 516-771 |
| Cow position: | chr24:32739028-32739281 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 521-789 |
| Cow position: | chr24:16118606-16118331 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 525-776 |
| Cow position: | chr24:16510194-16509961 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 527-779 |
| Cow position: | chr24:7390109-7390352 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 527-781 |
| Cow position: | chr24:34273038-34272788 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 527-790 |
| Cow position: | chr24:24661902-24662161 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 528-785 |
| Cow position: | chr24:28690906-28690660 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 530-785 |
| Cow position: | chr24:20969427-20969687 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 533-701 |
| Cow position: | chr24:28318737-28318904 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 537-767 |
| Cow position: | chr24:18811039-18810824 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 537-792 |
| Cow position: | chr24:33230905-33230638 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 164 |
| Conread position: | 540-779 |
| Cow position: | chr24:16641118-16640890 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 22 |
| Conread position: | 540-784 |
| Cow position: | chr24:29605829-29606057 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 541-727 |
| Cow position: | chr24:43011161-43011340 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 542-788 |
| Cow position: | chr24:4634964-4635196 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 543-785 |
| Cow position: | chr24:40404580-40404833 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 544-781 |
| Cow position: | chr24:37650874-37650653 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 544-785 |
| Cow position: | chr24:18615219-18614976 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 544-785 |
| Cow position: | chr24:39910826-39911059 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 545-785 |
| Cow position: | chr24:39523249-39523474 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 547-781 |
| Cow position: | chr24:18484797-18485015 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 547-781 |
| Cow position: | chr24:19769072-19768845 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 548-662 |
| Cow position: | chr24:15508370-15508485 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 548-768 |
| Cow position: | chr24:20017228-20017436 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 27 |
| Conread position: | 548-781 |
| Cow position: | chr24:13948320-13948102 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 548-785 |
| Cow position: | chr24:26848541-26848756 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 548-785 |
| Cow position: | chr24:35310925-35310696 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 90 |
| Conread position: | 548-785 |
| Cow position: | chr24:41406092-41405865 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 215, 52 |
| Conread position: | 549-761 |
| Cow position: | chr24:22420156-22419959 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 550-774 |
| Cow position: | chr24:18750907-18750692 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 550-776 |
| Cow position: | chr24:13586798-13587008 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 185, 15 |
| Conread position: | 550-789 |
| Cow position: | chr24:15861395-15861627 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 193, 86 |
| Conread position: | 550-792 |
| Cow position: | chr24:18302912-18302682 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 551-680 |
| Cow position: | chr24:13344795-13344923 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 551-737 |
| Cow position: | chr24:38006514-38006695 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 551-776 |
| Cow position: | chr24:17689419-17689627 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 551-779 |
| Cow position: | chr24:40055318-40055530 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 24 |
| Conread position: | 551-785 |
| Cow position: | chr24:19535060-19535281 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 551-785 |
| Cow position: | chr24:35150728-35150497 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 552-784 |
| Cow position: | chr24:34465296-34465530 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 552-785 |
| Cow position: | chr24:10499411-10499189 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 217, 12 |
| Conread position: | 552-785 |
| Cow position: | chr24:27401999-27402228 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 552-789 |
| Cow position: | chr24:16089425-16089199 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 553-776 |
| Cow position: | chr24:34533330-34533109 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 83, 188 |
| Conread position: | 553-784 |
| Cow position: | chr24:27348987-27349198 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 555-727 |
| Cow position: | chr24:37073653-37073831 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 555-782 |
| Cow position: | chr24:36485597-36485825 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 557-736 |
| Cow position: | chr24:31822778-31822600 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 113, 8 |
| Conread position: | 558-773 |
| Cow position: | chr24:11119482-11119264 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 558-779 |
| Cow position: | chr24:28289045-28289272 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 558-785 |
| Cow position: | chr24:31159820-31159594 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 558-789 |
| Cow position: | chr24:44987185-44987404 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 559-779 |
| Cow position: | chr24:30203040-30202805 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 149 |
| Conread position: | 559-783 |
| Cow position: | chr24:20225930-20225717 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 7 |
| Conread position: | 559-784 |
| Cow position: | chr24:5152712-5152499 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 560-700 |
| Cow position: | chr24:35466815-35466956 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 560-760 |
| Cow position: | chr24:35517101-35517298 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 560-776 |
| Cow position: | chr24:18328270-18328488 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 560-784 |
| Cow position: | chr24:19779154-19779376 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 137 |
| Conread position: | 561-733 |
| Cow position: | chr24:27168520-27168335 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 561-755 |
| Cow position: | chr24:34772116-34772308 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 76 |
| Conread position: | 562-761 |
| Cow position: | chr24:250352-250539 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 562-773 |
| Cow position: | chr24:18696066-18695866 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 562-783 |
| Cow position: | chr24:18405096-18405304 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 207, 15 |
| Conread position: | 562-785 |
| Cow position: | chr24:28303177-28303390 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 562-789 |
| Cow position: | chr24:36035865-36036083 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 563-755 |
| Cow position: | chr24:24091150-24091335 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 564-790 |
| Cow position: | chr24:29595616-29595839 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 565-699 |
| Cow position: | chr24:39841353-39841494 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 565-779 |
| Cow position: | chr24:19624046-19623837 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 566-668 |
| Cow position: | chr24:16517670-16517773 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 566-761 |
| Cow position: | chr24:22434062-22433873 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 567-763 |
| Cow position: | chr24:43024460-43024257 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 568-695 |
| Cow position: | chr24:21688444-21688317 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 105 |
| Conread position: | 568-719 |
| Cow position: | chr24:17492728-17492579 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 568-730 |
| Cow position: | chr24:43027046-43027197 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 26 |
| Conread position: | 568-766 |
| Cow position: | chr24:358548-358360 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 166, 72 |
| Conread position: | 568-768 |
| Cow position: | chr24:44420642-44420839 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 188, 100 |
| Conread position: | 568-771 |
| Cow position: | chr24:18313739-18313943 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 188 |
| Conread position: | 568-773 |
| Cow position: | chr24:32818100-32818313 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 568-779 |
| Cow position: | chr24:32890867-32891063 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 568-781 |
| Cow position: | chr24:24457064-24457271 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 568-781 |
| Cow position: | chr24:27285002-27284800 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 568-785 |
| Cow position: | chr24:2675514-2675290 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 568-785 |
| Cow position: | chr24:16895247-16895462 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 56 |
| Conread position: | 568-785 |
| Cow position: | chr24:34556239-34556011 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 73, 149 |
| Conread position: | 568-785 |
| Cow position: | chr24:34742927-34742727 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 206, 32 |
| Conread position: | 569-736 |
| Cow position: | chr24:6450686-6450518 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 133 |
| Conread position: | 569-768 |
| Cow position: | chr24:36010603-36010412 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 569-773 |
| Cow position: | chr24:12121076-12120883 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 569-776 |
| Cow position: | chr24:11028510-11028705 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 569-781 |
| Cow position: | chr24:36775594-36775798 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 569-781 |
| Cow position: | chr24:37395030-37395232 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 191, 67 |
| Conread position: | 569-785 |
| Cow position: | chr24:27448824-27448619 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 162, 31 |
| Conread position: | 570-763 |
| Cow position: | chr24:18390102-18390307 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 66, 199 |
| Conread position: | 570-767 |
| Cow position: | chr24:25142793-25142602 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 72 |
| Conread position: | 570-773 |
| Cow position: | chr24:39905250-39905469 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 570-776 |
| Cow position: | chr24:39304735-39304937 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 570-781 |
| Cow position: | chr24:15373604-15373384 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 571-737 |
| Cow position: | chr24:42792527-42792361 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 571-776 |
| Cow position: | chr24:2261845-2261651 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 571-776 |
| Cow position: | chr24:27553275-27553079 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 571-779 |
| Cow position: | chr24:33238079-33238284 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 115, 87 |
| Conread position: | 571-781 |
| Cow position: | chr24:28470492-28470701 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 571-781 |
| Cow position: | chr24:40983333-40983110 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 200 |
| Conread position: | 571-785 |
| Cow position: | chr24:5683484-5683254 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 193 |
| Conread position: | 572-773 |
| Cow position: | chr24:18874646-18874834 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 573-781 |
| Cow position: | chr24:25884975-25885179 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 161, 83 |
| Conread position: | 573-785 |
| Cow position: | chr24:33944579-33944376 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 574-758 |
| Cow position: | chr24:24013937-24013759 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 150, 76 |
| Conread position: | 575-785 |
| Cow position: | chr24:43200086-43200295 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 577-733 |
| Cow position: | chr24:28043182-28043340 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 577-737 |
| Cow position: | chr24:10840736-10840897 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 577-785 |
| Cow position: | chr24:15347769-15347564 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 35 |
| Conread position: | 577-785 |
| Cow position: | chr24:42726627-42726425 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 578-767 |
| Cow position: | chr24:32230336-32230513 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 109, 52 |
| Conread position: | 580-752 |
| Cow position: | chr24:19889791-19889958 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 580-779 |
| Cow position: | chr24:17751942-17752131 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 580-785 |
| Cow position: | chr24:39791729-39791516 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 580-788 |
| Cow position: | chr24:28043159-28042947 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 581-770 |
| Cow position: | chr24:40130301-40130119 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 582-785 |
| Cow position: | chr24:14786580-14786354 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 583-773 |
| Cow position: | chr24:22887851-22888031 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 583-779 |
| Cow position: | chr24:18741402-18741591 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 584-779 |
| Cow position: | chr24:162168-161984 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 585-785 |
| Cow position: | chr24:32204623-32204820 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 587-744 |
| Cow position: | chr24:21918022-21918181 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 588-785 |
| Cow position: | chr24:33465437-33465643 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 112 |
| Conread position: | 590-788 |
| Cow position: | chr24:6102983-6102802 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 593-751 |
| Cow position: | chr24:39333694-39333546 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 595-778 |
| Cow position: | chr24:7113384-7113204 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 597-781 |
| Cow position: | chr24:37453347-37453525 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 608-767 |
| Cow position: | chr24:39218405-39218559 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 608-785 |
| Cow position: | chr24:18331882-18331693 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 618-766 |
| Cow position: | chr24:27782355-27782209 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 622-785 |
| Cow position: | chr24:19769630-19769464 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 623-784 |
| Cow position: | chr24:41068397-41068236 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 634-785 |
| Cow position: | chr24:8006434-8006283 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 635-789 |
| Cow position: | chr24:18970381-18970538 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 636-757 |
| Cow position: | chr24:2353794-2353673 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 637-782 |
| Cow position: | chr24:22235589-22235445 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 29 |
| Conread position: | 644-781 |
| Cow position: | chr24:28319091-28319230 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 648-752 |
| Cow position: | chr24:7777518-7777621 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 652-790 |
| Cow position: | chr24:29679204-29679340 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 653-779 |
| Cow position: | chr24:28024387-28024260 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.