Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057J02.3 |
| Conread position: | 458-670 |
| Cow position: | chr25:32666567-32666352 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 511-781 |
| Cow position: | chr25:30624814-30625082 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 144, 22 |
| Conread position: | 513-668 |
| Cow position: | chr25:8223205-8223051 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 527-789 |
| Cow position: | chr25:35109040-35109276 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 528-722 |
| Cow position: | chr25:3972707-3972509 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 534-776 |
| Cow position: | chr25:18491269-18491044 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 535-668 |
| Cow position: | chr25:33839991-33839861 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 130, 22 |
| Conread position: | 538-776 |
| Cow position: | chr25:23016268-23016026 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 539-772 |
| Cow position: | chr25:14216035-14215800 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 548-645 |
| Cow position: | chr25:12565170-12565267 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 548-756 |
| Cow position: | chr25:32908178-32907964 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 548-758 |
| Cow position: | chr25:20018364-20018159 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 548-780 |
| Cow position: | chr25:18551114-18551332 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 548-785 |
| Cow position: | chr25:15218379-15218133 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 548-789 |
| Cow position: | chr25:20403880-20403646 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 548-789 |
| Cow position: | chr25:30619288-30619057 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 549-663 |
| Cow position: | chr25:36762713-36762598 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 549-773 |
| Cow position: | chr25:21048979-21049205 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 549-779 |
| Cow position: | chr25:36375733-36375513 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 549-785 |
| Cow position: | chr25:12609563-12609340 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 550-668 |
| Cow position: | chr25:13654117-13653996 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 550-733 |
| Cow position: | chr25:25582123-25581937 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 144 |
| Conread position: | 550-776 |
| Cow position: | chr25:14164416-14164205 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 550-776 |
| Cow position: | chr25:18156072-18156279 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 550-786 |
| Cow position: | chr25:37965482-37965253 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 550-788 |
| Cow position: | chr25:22520580-22520331 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 550-789 |
| Cow position: | chr25:15565769-15566012 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 551-668 |
| Cow position: | chr25:22538560-22538443 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 551-676 |
| Cow position: | chr25:12755274-12755398 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 551-760 |
| Cow position: | chr25:26989414-26989219 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 551-767 |
| Cow position: | chr25:1838458-1838256 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 551-767 |
| Cow position: | chr25:28597387-28597595 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 552-721 |
| Cow position: | chr25:26643028-26642868 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 552-773 |
| Cow position: | chr25:5791498-5791708 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 146, 10 |
| Conread position: | 552-779 |
| Cow position: | chr25:5808166-5807948 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 553-783 |
| Cow position: | chr25:34241867-34242105 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 553-785 |
| Cow position: | chr25:9989888-9990113 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 554-781 |
| Cow position: | chr25:12195005-12195225 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 555-785 |
| Cow position: | chr25:12252578-12252811 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 142 |
| Conread position: | 556-728 |
| Cow position: | chr25:23585055-23584897 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 556-731 |
| Cow position: | chr25:28939929-28940090 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 556-767 |
| Cow position: | chr25:13805239-13805028 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 109 |
| Conread position: | 556-779 |
| Cow position: | chr25:7470596-7470365 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 557-788 |
| Cow position: | chr25:13503660-13503427 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 5 |
| Conread position: | 558-784 |
| Cow position: | chr25:1823881-1824099 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 559-668 |
| Cow position: | chr25:7554888-7554998 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 559-756 |
| Cow position: | chr25:32667046-32667245 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 559-761 |
| Cow position: | chr25:22154240-22154045 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 124, 99 |
| Conread position: | 559-767 |
| Cow position: | chr25:26269505-26269702 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 126, 91 |
| Conread position: | 559-773 |
| Cow position: | chr25:33773563-33773772 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 559-781 |
| Cow position: | chr25:19584577-19584365 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 561-701 |
| Cow position: | chr25:33272845-33272704 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 561-781 |
| Cow position: | chr25:3744527-3744744 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 562-663 |
| Cow position: | chr25:13735579-13735681 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 562-668 |
| Cow position: | chr25:15440290-15440398 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 562-680 |
| Cow position: | chr25:7012934-7012813 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 562-773 |
| Cow position: | chr25:17919183-17918983 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 562-779 |
| Cow position: | chr25:11060342-11060135 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 562-783 |
| Cow position: | chr25:14944921-14945129 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 562-785 |
| Cow position: | chr25:16921585-16921800 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 562-785 |
| Cow position: | chr25:18906122-18905882 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 563-789 |
| Cow position: | chr25:13272774-13272562 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 565-698 |
| Cow position: | chr25:36273576-36273436 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 50 |
| Conread position: | 565-753 |
| Cow position: | chr25:20162281-20162461 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 565-785 |
| Cow position: | chr25:21893538-21893335 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 566-704 |
| Cow position: | chr25:14212068-14211922 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 566-721 |
| Cow position: | chr25:13470509-13470653 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 566-728 |
| Cow position: | chr25:22508100-22508269 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 566-748 |
| Cow position: | chr25:15999348-15999518 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 566-761 |
| Cow position: | chr25:14241145-14241332 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 566-781 |
| Cow position: | chr25:14791956-14791758 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 566-781 |
| Cow position: | chr25:22348255-22348462 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 6, 77 |
| Conread position: | 567-767 |
| Cow position: | chr25:18894510-18894716 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 98, 148 |
| Conread position: | 567-772 |
| Cow position: | chr25:23918065-23917849 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 567-785 |
| Cow position: | chr25:11038564-11038351 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 568-693 |
| Cow position: | chr25:6982780-6982656 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 568-781 |
| Cow position: | chr25:19478890-19478676 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 568-784 |
| Cow position: | chr25:7380638-7380841 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 568-785 |
| Cow position: | chr25:6473874-6474090 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 568-785 |
| Cow position: | chr25:12807239-12807039 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 568-789 |
| Cow position: | chr25:17474313-17474519 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 568-792 |
| Cow position: | chr25:21245393-21245614 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 569-668 |
| Cow position: | chr25:21894632-21894732 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 569-713 |
| Cow position: | chr25:28666669-28666519 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 138 |
| Conread position: | 569-721 |
| Cow position: | chr25:22642472-22642325 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 569-767 |
| Cow position: | chr25:30278998-30279193 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 569-774 |
| Cow position: | chr25:27520546-27520750 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 569-776 |
| Cow position: | chr25:7023384-7023174 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 100, 31 |
| Conread position: | 569-779 |
| Cow position: | chr25:5846606-5846806 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 569-782 |
| Cow position: | chr25:34170168-34169947 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 177 |
| Conread position: | 569-785 |
| Cow position: | chr25:33311124-33311330 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 73 |
| Conread position: | 569-790 |
| Cow position: | chr25:36872856-36873064 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 570-718 |
| Cow position: | chr25:15006473-15006335 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 570-742 |
| Cow position: | chr25:14212628-14212807 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 153 |
| Conread position: | 570-766 |
| Cow position: | chr25:36135916-36136124 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 570-774 |
| Cow position: | chr25:38135951-38135758 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 570-781 |
| Cow position: | chr25:11585727-11585519 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 570-785 |
| Cow position: | chr25:20008333-20008129 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 571-764 |
| Cow position: | chr25:21285098-21284894 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 571-785 |
| Cow position: | chr25:36019442-36019669 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 184 |
| Conread position: | 572-705 |
| Cow position: | chr25:26074779-26074902 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 572-752 |
| Cow position: | chr25:15305877-15305708 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 572-785 |
| Cow position: | chr25:14225563-14225359 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 572-785 |
| Cow position: | chr25:27801475-27801279 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 572-790 |
| Cow position: | chr25:13567180-13566960 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 573-767 |
| Cow position: | chr25:7061036-7061241 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 573-780 |
| Cow position: | chr25:35826067-35826283 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 573-781 |
| Cow position: | chr25:7008115-7007913 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 575-775 |
| Cow position: | chr25:12997813-12997610 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 577-788 |
| Cow position: | chr25:17144644-17144423 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 577-789 |
| Cow position: | chr25:18288579-18288775 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 580-779 |
| Cow position: | chr25:21500854-21501043 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 580-785 |
| Cow position: | chr25:10504147-10504340 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 581-756 |
| Cow position: | chr25:14018657-14018823 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 581-789 |
| Cow position: | chr25:7673494-7673288 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 582-781 |
| Cow position: | chr25:6682864-6683061 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 583-775 |
| Cow position: | chr25:20461301-20461110 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 583-781 |
| Cow position: | chr25:13443222-13443410 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 156, 53 |
| Conread position: | 584-752 |
| Cow position: | chr25:12509623-12509803 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 585-776 |
| Cow position: | chr25:23323680-23323496 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 585-781 |
| Cow position: | chr25:36872546-36872359 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 594-776 |
| Cow position: | chr25:7298719-7298893 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 598-785 |
| Cow position: | chr25:33256535-33256351 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 608-785 |
| Cow position: | chr25:7581253-7581434 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 630-785 |
| Cow position: | chr25:26161119-26160962 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 635-772 |
| Cow position: | chr25:21926291-21926432 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 636-785 |
| Cow position: | chr25:22750863-22751010 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 637-781 |
| Cow position: | chr25:15254204-15254347 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 644-785 |
| Cow position: | chr25:31762470-31762611 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 651-785 |
| Cow position: | chr25:28187815-28187948 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 656-776 |
| Cow position: | chr25:7216951-7216832 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 657-790 |
| Cow position: | chr25:17704870-17704736 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 666-790 |
| Cow position: | chr25:23998808-23998932 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.