Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057J02.3 |
| Conread position: | 518-737 |
| Cow position: | chr29:11685421-11685212 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 519-789 |
| Cow position: | chr29:19756688-19756425 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 525-776 |
| Cow position: | chr29:14375634-14375875 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 527-779 |
| Cow position: | chr29:11647356-11647097 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 530-735 |
| Cow position: | chr29:8768136-8767926 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 533-781 |
| Cow position: | chr29:19125565-19125323 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 534-758 |
| Cow position: | chr29:18748150-18748366 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 534-761 |
| Cow position: | chr29:11894934-11894719 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 534-767 |
| Cow position: | chr29:20177457-20177687 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 185, 27 |
| Conread position: | 534-778 |
| Cow position: | chr29:8798776-8799010 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 534-785 |
| Cow position: | chr29:22175927-22175678 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 538-690 |
| Cow position: | chr29:2623249-2623403 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 540-781 |
| Cow position: | chr29:1325672-1325444 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 541-785 |
| Cow position: | chr29:25333215-25333462 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 543-779 |
| Cow position: | chr29:3590719-3590468 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 202 |
| Conread position: | 543-788 |
| Cow position: | chr29:629763-629532 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 544-657 |
| Cow position: | chr29:13085876-13085764 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 544-778 |
| Cow position: | chr29:25288692-25288919 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 545-778 |
| Cow position: | chr29:1933348-1933567 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 144, 23 |
| Conread position: | 545-790 |
| Cow position: | chr29:39329358-39329611 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 547-663 |
| Cow position: | chr29:11822149-11822266 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 547-776 |
| Cow position: | chr29:40097202-40096974 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 548-663 |
| Cow position: | chr29:2720833-2720949 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 548-761 |
| Cow position: | chr29:16735447-16735245 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 548-773 |
| Cow position: | chr29:42760695-42760465 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 548-776 |
| Cow position: | chr29:16609969-16609754 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 30 |
| Conread position: | 548-782 |
| Cow position: | chr29:36210366-36210146 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 548-783 |
| Cow position: | chr29:16196071-16195841 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 549-726 |
| Cow position: | chr29:2070974-2071148 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 549-727 |
| Cow position: | chr29:19250562-19250387 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 549-746 |
| Cow position: | chr29:31942614-31942421 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 549-770 |
| Cow position: | chr29:26764596-26764378 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 549-773 |
| Cow position: | chr29:16200260-16200469 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 550-755 |
| Cow position: | chr29:35070853-35071057 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 550-773 |
| Cow position: | chr29:8163607-8163820 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 550-787 |
| Cow position: | chr29:17222636-17222408 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 551-776 |
| Cow position: | chr29:26211268-26211058 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 551-779 |
| Cow position: | chr29:31489542-31489322 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 551-785 |
| Cow position: | chr29:41531071-41530847 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 552-787 |
| Cow position: | chr29:19742687-19742449 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 105, 24 |
| Conread position: | 553-660 |
| Cow position: | chr29:35832978-35832870 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 553-752 |
| Cow position: | chr29:27042270-27042075 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 554-776 |
| Cow position: | chr29:26017283-26017496 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 554-776 |
| Cow position: | chr29:36220758-36220540 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 555-721 |
| Cow position: | chr29:31476591-31476766 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 555-779 |
| Cow position: | chr29:20167637-20167427 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 558-724 |
| Cow position: | chr29:34600639-34600809 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 558-767 |
| Cow position: | chr29:30366845-30367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 10 |
| Conread position: | 558-785 |
| Cow position: | chr29:2262770-2262995 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 107, 188 |
| Conread position: | 559-746 |
| Cow position: | chr29:16438562-16438743 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 559-776 |
| Cow position: | chr29:5046863-5046659 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 560-781 |
| Cow position: | chr29:23155444-23155229 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 561-785 |
| Cow position: | chr29:44378199-44378417 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 81 |
| Conread position: | 562-685 |
| Cow position: | chr29:29176156-29176283 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 562-760 |
| Cow position: | chr29:11081187-11081374 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 562-764 |
| Cow position: | chr29:20579236-20579029 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 103, 135 |
| Conread position: | 562-776 |
| Cow position: | chr29:18878275-18878475 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 562-779 |
| Cow position: | chr29:38858005-38858210 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 562-781 |
| Cow position: | chr29:11527563-11527788 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 74, 192 |
| Conread position: | 562-783 |
| Cow position: | chr29:17436954-17436750 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 562-785 |
| Cow position: | chr29:27668447-27668663 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 563-781 |
| Cow position: | chr29:26672693-26672910 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 103 |
| Conread position: | 563-784 |
| Cow position: | chr29:15947375-15947165 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 120, 73 |
| Conread position: | 564-752 |
| Cow position: | chr29:30188125-30188322 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 564-785 |
| Cow position: | chr29:29057384-29057176 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 564-789 |
| Cow position: | chr29:1022499-1022289 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 565-656 |
| Cow position: | chr29:17236626-17236535 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 565-781 |
| Cow position: | chr29:12680363-12680157 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 566-662 |
| Cow position: | chr29:24981243-24981340 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 566-767 |
| Cow position: | chr29:28949189-28948989 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 566-775 |
| Cow position: | chr29:6844407-6844626 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 567-782 |
| Cow position: | chr29:24026904-24026694 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 567-785 |
| Cow position: | chr29:11562828-11562610 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 50 |
| Conread position: | 568-653 |
| Cow position: | chr29:5147836-5147751 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 568-733 |
| Cow position: | chr29:37990786-37990950 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 568-736 |
| Cow position: | chr29:25432655-25432499 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 568-752 |
| Cow position: | chr29:27858989-27858816 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 568-760 |
| Cow position: | chr29:25097047-25096851 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 145, 37 |
| Conread position: | 568-766 |
| Cow position: | chr29:19061561-19061758 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 97, 26 |
| Conread position: | 568-771 |
| Cow position: | chr29:40583986-40583797 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 568-773 |
| Cow position: | chr29:24345009-24345219 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 568-776 |
| Cow position: | chr29:501401-501203 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 568-776 |
| Cow position: | chr29:17297339-17297142 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 69 |
| Conread position: | 568-781 |
| Cow position: | chr29:8926249-8926460 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 568-784 |
| Cow position: | chr29:749690-749907 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 568-785 |
| Cow position: | chr29:5994888-5995097 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 162, 30 |
| Conread position: | 568-785 |
| Cow position: | chr29:13028652-13028441 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 568-785 |
| Cow position: | chr29:40298795-40299023 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 568-787 |
| Cow position: | chr29:13373522-13373292 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 568-790 |
| Cow position: | chr29:22518920-22519135 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 569-727 |
| Cow position: | chr29:28733909-28734078 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 569-776 |
| Cow position: | chr29:32656636-32656439 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 569-778 |
| Cow position: | chr29:35677341-35677539 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 569-785 |
| Cow position: | chr29:22734906-22735108 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 569-785 |
| Cow position: | chr29:37618508-37618302 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 187, 60 |
| Conread position: | 569-785 |
| Cow position: | chr29:38581192-38580977 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 570-737 |
| Cow position: | chr29:17301970-17301806 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 570-745 |
| Cow position: | chr29:7040669-7040835 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 570-751 |
| Cow position: | chr29:2730082-2730260 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 570-761 |
| Cow position: | chr29:26631248-26631062 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 570-763 |
| Cow position: | chr29:42771852-42771656 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 143 |
| Conread position: | 570-773 |
| Cow position: | chr29:9800858-9800659 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 570-773 |
| Cow position: | chr29:11042642-11042441 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 570-773 |
| Cow position: | chr29:18579620-18579826 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 190 |
| Conread position: | 570-773 |
| Cow position: | chr29:21645516-21645325 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 570-776 |
| Cow position: | chr29:32799504-32799705 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 570-781 |
| Cow position: | chr29:31200474-31200259 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 570-781 |
| Cow position: | chr29:31929185-31928990 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 570-787 |
| Cow position: | chr29:11397714-11397931 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 95, 99 |
| Conread position: | 571-720 |
| Cow position: | chr29:4602931-4603079 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 571-730 |
| Cow position: | chr29:35281670-35281516 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 85 |
| Conread position: | 571-737 |
| Cow position: | chr29:36357326-36357171 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 571-776 |
| Cow position: | chr29:40994681-40994884 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 571-787 |
| Cow position: | chr29:19910161-19909951 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 572-767 |
| Cow position: | chr29:35737120-35737312 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 573-781 |
| Cow position: | chr29:22714514-22714721 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 121 |
| Conread position: | 574-761 |
| Cow position: | chr29:23819189-23819369 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 574-785 |
| Cow position: | chr29:7954769-7954970 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 144, 68 |
| Conread position: | 575-782 |
| Cow position: | chr29:28840367-28840156 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 577-758 |
| Cow position: | chr29:30743518-30743692 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 577-781 |
| Cow position: | chr29:40874220-40874012 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 579-785 |
| Cow position: | chr29:13639179-13639370 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 175, 19 |
| Conread position: | 580-751 |
| Cow position: | chr29:17663569-17663730 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 580-761 |
| Cow position: | chr29:22335036-22335207 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 580-781 |
| Cow position: | chr29:30681514-30681709 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 580-784 |
| Cow position: | chr29:935115-934923 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 580-790 |
| Cow position: | chr29:24952876-24952680 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 582-783 |
| Cow position: | chr29:34760214-34760414 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 59, 174 |
| Conread position: | 582-789 |
| Cow position: | chr29:9310790-9310593 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 583-761 |
| Cow position: | chr29:7143485-7143313 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 157, 59 |
| Conread position: | 583-785 |
| Cow position: | chr29:29324234-29324423 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 585-785 |
| Cow position: | chr29:12783771-12783963 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 586-770 |
| Cow position: | chr29:33393871-33393690 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 600-776 |
| Cow position: | chr29:86835-87005 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 601-785 |
| Cow position: | chr29:24051210-24051384 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 605-737 |
| Cow position: | chr29:2533466-2533328 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 609-779 |
| Cow position: | chr29:40959674-40959846 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 634-767 |
| Cow position: | chr29:17022299-17022165 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 634-792 |
| Cow position: | chr29:28559528-28559370 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 636-767 |
| Cow position: | chr29:16365740-16365870 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 640-784 |
| Cow position: | chr29:6870621-6870767 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 643-781 |
| Cow position: | chr29:16672628-16672492 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 660-790 |
| Cow position: | chr29:28979380-28979506 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 664-785 |
| Cow position: | chr29:5210609-5210489 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 664-790 |
| Cow position: | chr29:4423320-4423447 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 665-785 |
| Cow position: | chr29:19244341-19244462 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 671-789 |
| Cow position: | chr29:12625865-12625983 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.