Cow genome map

Conread name: Ss1.1-Pig4-TMW8057J02.3

Conread position: 510-785
Cow position: chrX:39179935-39180207 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 135

Conread position: 511-731
Cow position: chrX:35509395-35509599 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 28

Conread position: 513-785
Cow position: chrX:44962041-44961777 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 21

Conread position: 514-789
Cow position: chrX:37129580-37129291 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 50

Conread position: 516-771
Cow position: chrX:4403599-4403357 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 28

Conread position: 517-781
Cow position: chrX:23513719-23513985 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 24

Conread position: 521-785
Cow position: chrX:38302095-38301835 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 29

Conread position: 528-764
Cow position: chrX:47349805-47349563 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 33

Conread position: 529-752
Cow position: chrX:27175276-27175057 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 129

Conread position: 531-754
Cow position: chrX:4592221-4592445 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 31

Conread position: 535-781
Cow position: chrX:34532770-34532550 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 537-785
Cow position: chrX:11084780-11085037 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 97, 41

Conread position: 539-734
Cow position: chrX:19510851-19511040 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 39

Conread position: 542-668
Cow position: chrX:11195040-11194911 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 33

Conread position: 543-783
Cow position: chrX:26843010-26843239 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 22

Conread position: 544-764
Cow position: chrX:47063014-47063228 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 545-668
Cow position: chrX:47123304-47123182 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 47

Conread position: 545-779
Cow position: chrX:46910058-46909847 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 545-783
Cow position: chrX:8642299-8642074 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 91

Conread position: 546-757
Cow position: chrX:26881825-26882026 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 91

Conread position: 546-790
Cow position: chrX:45843341-45843573 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 18

Conread position: 547-654
Cow position: chrX:8925930-8925825 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 547-771
Cow position: chrX:35410003-35409792 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 136, 28

Conread position: 547-773
Cow position: chrX:12095517-12095734 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 91

Conread position: 548-680
Cow position: chrX:11180905-11181036 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 28

Conread position: 548-766
Cow position: chrX:43008858-43008654 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 137, 12

Conread position: 548-775
Cow position: chrX:15146945-15147161 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 60

Conread position: 548-779
Cow position: chrX:27296244-27296496 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 213

Conread position: 548-781
Cow position: chrX:31312305-31312059 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 84, 28

Conread position: 548-789
Cow position: chrX:25815652-25815879 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 20

Conread position: 548-790
Cow position: chrX:32877128-32877354 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 549-710
Cow position: chrX:13636068-13635902 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 16

Conread position: 549-737
Cow position: chrX:11674363-11674184 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 549-748
Cow position: chrX:41215570-41215385 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 549-773
Cow position: chrX:4036904-4037135 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 26

Conread position: 549-773
Cow position: chrX:33654590-33654806 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 90

Conread position: 550-761
Cow position: chrX:47100343-47100547 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 88

Conread position: 550-768
Cow position: chrX:43014414-43014630 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 12

Conread position: 550-776
Cow position: chrX:15546128-15545917 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 550-779
Cow position: chrX:20345697-20345483 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 15

Conread position: 550-781
Cow position: chrX:27668713-27668928 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 550-781
Cow position: chrX:35986066-35985850 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 50

Conread position: 550-783
Cow position: chrX:41435295-41435520 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 133, 26

Conread position: 550-785
Cow position: chrX:29601579-29601802 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 29, 92

Conread position: 550-785
Cow position: chrX:35659044-35658825 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 51

Conread position: 550-785
Cow position: chrX:41270717-41270960 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 550-785
Cow position: chrX:42492273-42492497 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 551-662
Cow position: chrX:7362546-7362658 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 551-737
Cow position: chrX:10154801-10154973 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 551-737
Cow position: chrX:21910766-21910954 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 551-742
Cow position: chrX:42164660-42164463 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 13

Conread position: 551-752
Cow position: chrX:37140916-37141110 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 56

Conread position: 551-760
Cow position: chrX:26979543-26979738 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 19

Conread position: 551-773
Cow position: chrX:38968141-38967927 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 551-776
Cow position: chrX:17231983-17231770 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 10

Conread position: 551-781
Cow position: chrX:12979589-12979804 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 551-781
Cow position: chrX:30337705-30337924 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 86

Conread position: 551-781
Cow position: chrX:34315773-34315549 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 70, 14

Conread position: 551-790
Cow position: chrX:41027408-41027180 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 552-668
Cow position: chrX:42482542-42482660 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 114

Conread position: 552-669
Cow position: chrX:11717476-11717593 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 113

Conread position: 552-752
Cow position: chrX:41062480-41062288 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 552-773
Cow position: chrX:16409865-16409640 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 56

Conread position: 552-781
Cow position: chrX:22115066-22115287 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 93

Conread position: 552-781
Cow position: chrX:29679999-29680231 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 118

Conread position: 552-785
Cow position: chrX:753412-753178 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 51

Conread position: 552-785
Cow position: chrX:35285420-35285199 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 552-789
Cow position: chrX:27705836-27705608 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 68

Conread position: 553-764
Cow position: chrX:16348311-16348524 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 83, 23

Conread position: 553-770
Cow position: chrX:152152-151941 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 90

Conread position: 553-781
Cow position: chrX:40531780-40532013 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 553-784
Cow position: chrX:11717516-11717756 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 39

Conread position: 553-785
Cow position: chrX:20339647-20339866 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 52

Conread position: 554-760
Cow position: chrX:12255061-12255267 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 26

Conread position: 554-779
Cow position: chrX:14925519-14925308 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 83

Conread position: 555-776
Cow position: chrX:20168797-20168593 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 556-718
Cow position: chrX:29488266-29488104 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 108, 20

Conread position: 556-784
Cow position: chrX:16763013-16762798 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 88

Conread position: 556-785
Cow position: chrX:6267913-6267694 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 557-737
Cow position: chrX:42883486-42883301 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 52

Conread position: 557-781
Cow position: chrX:38853453-38853228 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 8

Conread position: 558-745
Cow position: chrX:23182726-23182917 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 558-786
Cow position: chrX:20583901-20583691 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 558-787
Cow position: chrX:42380871-42381088 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 559-683
Cow position: chrX:35848987-35848861 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 559-718
Cow position: chrX:27689351-27689181 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 559-748
Cow position: chrX:3405038-3405231 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 106

Conread position: 560-761
Cow position: chrX:19096954-19097168 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 189

Conread position: 560-772
Cow position: chrX:29230248-29230038 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 95

Conread position: 560-773
Cow position: chrX:30672143-30672358 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 5

Conread position: 560-783
Cow position: chrX:31829203-31829431 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 221

Conread position: 560-785
Cow position: chrX:34412088-34411872 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 84

Conread position: 561-737
Cow position: chrX:45657697-45657866 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 561-751
Cow position: chrX:5017177-5017361 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 40

Conread position: 561-765
Cow position: chrX:23485769-23485567 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 108

Conread position: 562-716
Cow position: chrX:10479987-10479844 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 562-748
Cow position: chrX:27447956-27447772 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 95

Conread position: 562-761
Cow position: chrX:25282777-25282988 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 562-765
Cow position: chrX:19394792-19394599 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 562-771
Cow position: chrX:28596891-28597101 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 187, 172

Conread position: 562-772
Cow position: chrX:11602250-11602444 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 562-776
Cow position: chrX:4327945-4328148 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 75

Conread position: 562-779
Cow position: chrX:37489966-37489751 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 562-781
Cow position: chrX:40046328-40046545 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 14

Conread position: 562-785
Cow position: chrX:48558983-48558772 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 57

Conread position: 562-787
Cow position: chrX:33466859-33466649 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 38

Conread position: 562-788
Cow position: chrX:7351540-7351323 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 40

Conread position: 563-722
Cow position: chrX:32975854-32976023 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 563-748
Cow position: chrX:4444664-4444484 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 564-785
Cow position: chrX:25412154-25411933 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 564-785
Cow position: chrX:37062332-37062559 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 565-785
Cow position: chrX:42246946-42247156 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 72

Conread position: 566-755
Cow position: chrX:5915424-5915244 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 70

Conread position: 566-779
Cow position: chrX:39290588-39290391 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 71

Conread position: 566-779
Cow position: chrX:40337144-40336943 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 566-785
Cow position: chrX:20957471-20957264 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 6, 17

Conread position: 566-785
Cow position: chrX:23266658-23266441 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 71, 24

Conread position: 566-785
Cow position: chrX:40108280-40108493 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 193, 71

Conread position: 566-787
Cow position: chrX:31250623-31250412 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 66

Conread position: 566-789
Cow position: chrX:6559223-6559426 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 77

Conread position: 567-668
Cow position: chrX:23265199-23265301 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 567-759
Cow position: chrX:42994828-42994640 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 71

Conread position: 567-784
Cow position: chrX:2206358-2206565 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 136, 94

Conread position: 567-785
Cow position: chrX:11656310-11656107 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 567-788
Cow position: chrX:40649134-40648919 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 568-712
Cow position: chrX:48043992-48044134 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 568-742
Cow position: chrX:33865066-33865239 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 568-767
Cow position: chrX:5097563-5097755 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 161, 27

Conread position: 568-767
Cow position: chrX:42875440-42875256 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 568-776
Cow position: chrX:42894153-42893961 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 568-777
Cow position: chrX:616008-616225 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 568-779
Cow position: chrX:34441222-34441422 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 115, 82

Conread position: 568-779
Cow position: chrX:36866404-36866205 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 68

Conread position: 568-779
Cow position: chrX:48822110-48822310 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 67

Conread position: 568-781
Cow position: chrX:6599543-6599752 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 568-781
Cow position: chrX:7695994-7695781 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 122

Conread position: 568-781
Cow position: chrX:26881331-26881535 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 568-781
Cow position: chrX:46079319-46079115 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 568-783
Cow position: chrX:25037223-25037017 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 568-785
Cow position: chrX:16323784-16323988 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 0

Conread position: 568-785
Cow position: chrX:17956920-17956719 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 568-785
Cow position: chrX:24365591-24365795 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 83

Conread position: 568-785
Cow position: chrX:42855694-42855484 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 568-790
Cow position: chrX:40035211-40035420 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 193, 17

Conread position: 569-735
Cow position: chrX:11670917-11670762 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 67

Conread position: 569-749
Cow position: chrX:6480365-6480534 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 569-764
Cow position: chrX:13382572-13382371 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 569-767
Cow position: chrX:8759853-8759671 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 67

Conread position: 569-770
Cow position: chrX:37867484-37867295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 67

Conread position: 569-773
Cow position: chrX:40451838-40452046 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 128

Conread position: 569-776
Cow position: chrX:28068081-28067885 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 569-779
Cow position: chrX:2314388-2314587 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 65

Conread position: 569-781
Cow position: chrX:31373780-31373566 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 31

Conread position: 569-783
Cow position: chrX:12290948-12290747 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 569-785
Cow position: chrX:12250045-12249837 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 165, 63

Conread position: 569-785
Cow position: chrX:24170495-24170703 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 66

Conread position: 569-785
Cow position: chrX:27393788-27394000 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 569-785
Cow position: chrX:30962645-30962851 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 114, 67

Conread position: 569-785
Cow position: chrX:42449783-42449988 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 67

Conread position: 569-789
Cow position: chrX:5872562-5872339 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 96, 127

Conread position: 569-790
Cow position: chrX:23498433-23498656 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 67, 38

Conread position: 569-790
Cow position: chrX:46588050-46587843 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 60

Conread position: 570-684
Cow position: chrX:15545422-15545541 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 570-686
Cow position: chrX:33740687-33740572 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 570-731
Cow position: chrX:28846355-28846188 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 570-761
Cow position: chrX:2742095-2742291 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 14

Conread position: 570-763
Cow position: chrX:11589138-11589317 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 570-767
Cow position: chrX:29451316-29451507 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 139, 88

Conread position: 570-767
Cow position: chrX:34270790-34270605 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 570-779
Cow position: chrX:24332006-24331808 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 62

Conread position: 570-779
Cow position: chrX:40480619-40480837 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 66, 129

Conread position: 570-779
Cow position: chrX:40557429-40557647 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 570-781
Cow position: chrX:22387014-22387216 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 570-785
Cow position: chrX:18964605-18964797 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 570-785
Cow position: chrX:34565514-34565312 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 66, 0

Conread position: 570-785
Cow position: chrX:38549676-38549471 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 65

Conread position: 570-786
Cow position: chrX:41940078-41939848 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 570-789
Cow position: chrX:13122173-13121960 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 103

Conread position: 570-789
Cow position: chrX:19018599-19018809 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 570-789
Cow position: chrX:19356693-19356491 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 189, 61

Conread position: 570-790
Cow position: chrX:38587616-38587822 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 571-736
Cow position: chrX:3543093-3542931 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 112, 70

Conread position: 571-767
Cow position: chrX:31983350-31983541 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 571-768
Cow position: chrX:41990895-41991091 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 71

Conread position: 571-776
Cow position: chrX:1960197-1960390 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 63

Conread position: 571-779
Cow position: chrX:44055031-44054834 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 571-781
Cow position: chrX:878122-878350 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 571-785
Cow position: chrX:23562101-23561883 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 65, 106

Conread position: 571-785
Cow position: chrX:40680843-40680640 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 572-737
Cow position: chrX:13784985-13785148 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 572-773
Cow position: chrX:43011916-43012111 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 130

Conread position: 573-779
Cow position: chrX:27508798-27508990 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 573-785
Cow position: chrX:38654206-38654404 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 574-776
Cow position: chrX:10516479-10516288 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 575-727
Cow position: chrX:19286677-19286827 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 59

Conread position: 577-748
Cow position: chrX:44397233-44397073 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 577-756
Cow position: chrX:36039637-36039454 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 577-761
Cow position: chrX:41363628-41363809 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 87, 0

Conread position: 577-776
Cow position: chrX:31489743-31489555 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 577-781
Cow position: chrX:8327127-8326934 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 577-781
Cow position: chrX:31626743-31626943 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 19

Conread position: 577-783
Cow position: chrX:39220310-39220109 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 90

Conread position: 577-785
Cow position: chrX:1122325-1122517 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 577-785
Cow position: chrX:27074829-27075025 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 577-785
Cow position: chrX:46532268-46532469 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 110, 78

Conread position: 577-789
Cow position: chrX:7278128-7277933 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 577-789
Cow position: chrX:35382820-35383014 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 577-792
Cow position: chrX:4612652-4612863 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 88, 19

Conread position: 578-776
Cow position: chrX:27228350-27228161 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 62

Conread position: 580-781
Cow position: chrX:34508779-34508574 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 44

Conread position: 580-782
Cow position: chrX:40685110-40685299 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 580-784
Cow position: chrX:6850444-6850238 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 15

Conread position: 580-785
Cow position: chrX:18694703-18694901 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 25

Conread position: 581-776
Cow position: chrX:44995718-44995533 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 70

Conread position: 582-771
Cow position: chrX:6407761-6407584 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 582-781
Cow position: chrX:9634975-9635160 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 582-784
Cow position: chrX:32821257-32821056 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 87

Conread position: 582-785
Cow position: chrX:42836398-42836207 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 582-787
Cow position: chrX:34420953-34420758 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 583-761
Cow position: chrX:10237697-10237863 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 583-785
Cow position: chrX:10831265-10831464 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 70

Conread position: 584-780
Cow position: chrX:27667655-27667456 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 16

Conread position: 585-767
Cow position: chrX:25286508-25286677 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 585-789
Cow position: chrX:36848343-36848555 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 117

Conread position: 586-781
Cow position: chrX:6690030-6690230 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 16

Conread position: 586-785
Cow position: chrX:23113505-23113311 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 34

Conread position: 586-785
Cow position: chrX:28877953-28878148 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 66

Conread position: 590-776
Cow position: chrX:31294360-31294537 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 590-790
Cow position: chrX:22822264-22822067 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 601-781
Cow position: chrX:169343-169515 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 608-752
Cow position: chrX:26692411-26692270 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 608-781
Cow position: chrX:11180996-11181166 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 608-781
Cow position: chrX:29733391-29733562 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 608-785
Cow position: chrX:34503119-34502946 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 617-781
Cow position: chrX:4043674-4043834 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 624-779
Cow position: chrX:23860805-23860962 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 20

Conread position: 626-785
Cow position: chrX:25459544-25459708 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 40

Conread position: 631-789
Cow position: chrX:29553466-29553307 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 633-776
Cow position: chrX:23574831-23574690 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 33

Conread position: 634-748
Cow position: chrX:16481392-16481507 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 634-781
Cow position: chrX:28098502-28098356 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 32

Conread position: 634-785
Cow position: chrX:20743781-20743630 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 59

Conread position: 634-789
Cow position: chrX:43730046-43730201 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 142

Conread position: 635-759
Cow position: chrX:32795933-32796056 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 30

Conread position: 635-759
Cow position: chrX:32797229-32797353 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 30

Conread position: 636-781
Cow position: chrX:23562807-23562662 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 30

Conread position: 639-785
Cow position: chrX:11082452-11082596 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 643-785
Cow position: chrX:37910613-37910471 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 41

Conread position: 644-753
Cow position: chrX:35019420-35019310 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 660-779
Cow position: chrX:9201699-9201580 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 660-785
Cow position: chrX:25788753-25788879 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 664-785
Cow position: chrX:46072670-46072791 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 672-787
Cow position: chrX:11762862-11762977 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.