Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
| Conread position: | 1-125 |
| Cow position: | chr1:80898480-80898355 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 113-532 |
| Cow position: | chr1:80898143-80897731 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 99 |
| Conread position: | 362-532 |
| Cow position: | chr1:64189499-64189676 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 363-532 |
| Cow position: | chr1:15314923-15314742 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 368-552 |
| Cow position: | chr1:71782658-71782474 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 369-532 |
| Cow position: | chr1:69415704-69415535 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 369-533 |
| Cow position: | chr1:95467327-95467164 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 370-542 |
| Cow position: | chr1:70533931-70533754 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 371-532 |
| Cow position: | chr1:44746871-44747035 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 371-532 |
| Cow position: | chr1:89548201-89548362 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 372-454 |
| Cow position: | chr1:44011825-44011907 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-469 |
| Cow position: | chr1:4451262-4451165 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-477 |
| Cow position: | chr1:62713941-62713838 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 372-478 |
| Cow position: | chr1:56073463-56073356 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 372-493 |
| Cow position: | chr1:50345554-50345680 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 372-500 |
| Cow position: | chr1:6734467-6734592 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 372-510 |
| Cow position: | chr1:48083737-48083879 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 372-511 |
| Cow position: | chr1:75347633-75347777 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 372-513 |
| Cow position: | chr1:44511525-44511379 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 372-519 |
| Cow position: | chr1:77132618-77132761 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 372-521 |
| Cow position: | chr1:2997957-2998115 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 372-521 |
| Cow position: | chr1:50045810-50045965 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 372-524 |
| Cow position: | chr1:90413391-90413542 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 137, 51 |
| Conread position: | 372-526 |
| Cow position: | chr1:26424750-26424600 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 372-529 |
| Cow position: | chr1:25184123-25184283 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-530 |
| Cow position: | chr1:11021026-11021189 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 372-530 |
| Cow position: | chr1:52414949-52414791 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 372-530 |
| Cow position: | chr1:66355705-66355541 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 372-530 |
| Cow position: | chr1:70416138-70416301 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 372-530 |
| Cow position: | chr1:85141722-85141562 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 372-531 |
| Cow position: | chr1:33921269-33921106 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 372-531 |
| Cow position: | chr1:35843918-35843748 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-531 |
| Cow position: | chr1:47117268-47117109 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 372-531 |
| Cow position: | chr1:80764527-80764361 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-531 |
| Cow position: | chr1:95229323-95229156 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 372-532 |
| Cow position: | chr1:3289131-3288973 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 372-532 |
| Cow position: | chr1:4788546-4788709 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:5278402-5278244 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 372-532 |
| Cow position: | chr1:5347071-5347230 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 372-532 |
| Cow position: | chr1:6130724-6130565 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 139 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 372-532 |
| Cow position: | chr1:9355098-9354945 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:15902502-15902670 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:18414458-18414295 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 372-532 |
| Cow position: | chr1:20581952-20582116 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 139 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:31871437-31871603 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 372-532 |
| Cow position: | chr1:33986501-33986347 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 372-532 |
| Cow position: | chr1:45479579-45479416 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:45925048-45925216 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 372-532 |
| Cow position: | chr1:50261919-50261753 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:51257027-51257189 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 372-532 |
| Cow position: | chr1:53039693-53039534 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 372-532 |
| Cow position: | chr1:53920599-53920762 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:54217025-54217191 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 372-532 |
| Cow position: | chr1:61737108-61737271 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:64218418-64218254 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:71136161-71136325 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:74947109-74946945 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 372-532 |
| Cow position: | chr1:75183739-75183576 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:77118525-77118359 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 372-532 |
| Cow position: | chr1:80384755-80384588 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr1:82076586-82076748 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 372-532 |
| Cow position: | chr1:85411589-85411745 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 372-532 |
| Cow position: | chr1:95765082-95764918 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 372-532 |
| Cow position: | chr1:97622208-97622045 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 372-533 |
| Cow position: | chr1:28678531-28678699 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-533 |
| Cow position: | chr1:46646404-46646559 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 372-534 |
| Cow position: | chr1:18283490-18283658 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 165 |
| Conread position: | 372-534 |
| Cow position: | chr1:90423072-90422905 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 372-535 |
| Cow position: | chr1:76096447-76096611 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 372-536 |
| Cow position: | chr1:22910365-22910531 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 160 |
| Conread position: | 372-536 |
| Cow position: | chr1:31190098-31189936 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 372-536 |
| Cow position: | chr1:41735611-41735440 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-542 |
| Cow position: | chr1:69004406-69004574 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 102, 79 |
| Conread position: | 372-544 |
| Cow position: | chr1:75998459-75998282 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 372-546 |
| Cow position: | chr1:58825553-58825729 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 372-550 |
| Cow position: | chr1:73901017-73901197 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 372-550 |
| Cow position: | chr1:76170214-76170392 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 102, 147 |
| Conread position: | 372-552 |
| Cow position: | chr1:3657353-3657171 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 372-552 |
| Cow position: | chr1:46205823-46206003 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 149 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 104, 173 |
| Conread position: | 373-490 |
| Cow position: | chr1:73653629-73653513 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 373-502 |
| Cow position: | chr1:80973594-80973465 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 109, 90 |
| Conread position: | 373-506 |
| Cow position: | chr1:8192720-8192589 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 93 |
| Conread position: | 373-530 |
| Cow position: | chr1:50634247-50634087 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 373-532 |
| Cow position: | chr1:22777534-22777368 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 373-532 |
| Cow position: | chr1:26531574-26531407 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 373-532 |
| Cow position: | chr1:59132207-59132041 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 373-532 |
| Cow position: | chr1:95826344-95826187 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 373-532 |
| Cow position: | chr1:97603624-97603464 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 140 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 137, 5 |
| Conread position: | 374-474 |
| Cow position: | chr1:6794911-6794811 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 374-528 |
| Cow position: | chr1:62732583-62732736 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 374-529 |
| Cow position: | chr1:5102478-5102322 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 374-532 |
| Cow position: | chr1:45310261-45310100 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 374-532 |
| Cow position: | chr1:102466315-102466474 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 375-532 |
| Cow position: | chr1:36614074-36613917 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 126 |
| Conread position: | 375-542 |
| Cow position: | chr1:25793423-25793253 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 375-546 |
| Cow position: | chr1:89007735-89007565 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 376-477 |
| Cow position: | chr1:30413607-30413708 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-498 |
| Cow position: | chr1:29916431-29916551 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 376-532 |
| Cow position: | chr1:51904321-51904167 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 376-532 |
| Cow position: | chr1:70236249-70236093 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 135 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 378-515 |
| Cow position: | chr1:16972480-16972333 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 378-532 |
| Cow position: | chr1:7657295-7657144 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 127 |
| Conread position: | 378-532 |
| Cow position: | chr1:96339759-96339909 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 93 |
| Conread position: | 379-539 |
| Cow position: | chr1:72807335-72807500 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 380-530 |
| Cow position: | chr1:49347200-49347352 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 380-532 |
| Cow position: | chr1:45638505-45638654 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 380-532 |
| Cow position: | chr1:56643584-56643429 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 381-521 |
| Cow position: | chr1:81162039-81162178 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 381-532 |
| Cow position: | chr1:29337935-29338090 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 381-542 |
| Cow position: | chr1:30066640-30066806 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 383-545 |
| Cow position: | chr1:13195407-13195243 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 390-534 |
| Cow position: | chr1:38525636-38525785 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 391-532 |
| Cow position: | chr1:765231-765086 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 391-532 |
| Cow position: | chr1:92981309-92981453 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 393-532 |
| Cow position: | chr1:43789888-43790029 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 394-530 |
| Cow position: | chr1:54125190-54125053 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 394-531 |
| Cow position: | chr1:80438590-80438444 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 394-532 |
| Cow position: | chr1:12227066-12226925 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 394-534 |
| Cow position: | chr1:64624793-64624652 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 395-531 |
| Cow position: | chr1:26688436-26688298 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 397-532 |
| Cow position: | chr1:63364666-63364803 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 398-532 |
| Cow position: | chr1:80886545-80886680 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 398-532 |
| Cow position: | chr1:87149066-87149208 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 399-530 |
| Cow position: | chr1:3570271-3570138 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 404-546 |
| Cow position: | chr1:49346088-49346233 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 406-532 |
| Cow position: | chr1:75224961-75225088 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 406-552 |
| Cow position: | chr1:44086353-44086207 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 409-529 |
| Cow position: | chr1:23330518-23330396 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 409-529 |
| Cow position: | chr1:86369370-86369494 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 417-541 |
| Cow position: | chr1:49131074-49130945 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 417-552 |
| Cow position: | chr1:34750902-34750764 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 427-532 |
| Cow position: | chr1:90180216-90180322 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 427-534 |
| Cow position: | chr1:23674401-23674293 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.